rna3772, rna3772 (mRNA) Nannochloropsis gaditana

Overview
Namerna3772
Unique Namerna3772
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1127
Alignment locationCM002462.1:10564..11761 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100103g15.7045.mrna
Orig protein idgnl|cribi|Naga_100103g15.7045
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:10564..11761 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100103g15gene3633Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna3772rna3772-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26908.1cds3763Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna3772 ID=rna3772|Name=rna3772|organism=Nannochloropsis gaditana|type=mRNA|length=1127bp
TCTCAACATGCTCCGCATCCTACCTGTCCTCGCAGTCCAAGTCTTCCTGT
ACCAGTACCTACGTGATCATGCCCTGCGCCCCCTGGCGCCTGCCTTCCCT
TTCTCCCCCACCTCCCCCTCTTCCTCTCCCTCCACCGCCACCGCCAGCGG
CCCGACCGACGCGCGCACTACCACCTGGGCGCTGAACCTGGGCGCCAGCA
TGCCCCCCCCCCCCTCATTCTACCACCCTCCCACCCGGGCCCCTCCCTCT
GGAAACCAAGCACATGCTCGCGGGGGGCTTGGCGGGGGTGGCCGCCAACC
TGCTCTTCCACCCCCTTGACACCCTCCGCGCCCGCATCACCGCCCAAACA
GCGTCCTCCCGACCCTACCCCGAGGGTGTCTGGCAGGCCACGCTTCATAT
TTGGAAGTTAGAAGGACCCCGAGCCTTTTGGCGGGGGGCGACCCCTTGCG
CGGTCTGGGCCTTCCTCTACATCGGGATCAACTACACGTGCCTGGCTTTC
CTTGCCCCCCTCGCCCTCCACCGCCACCGACATTCCTCCCTCCCCCTTGC
GCGCCCTACTGACCCCCTGTCTGCCCCCTCCTCTCCTCCTCCTTCGTCCG
CCATCTTGAGCGTGCTGGCGGCGGGAGCAGTGGCTCAATCCATCGCCTAC
CCCTTTGACCTTCTGAGACGTCGGATGCAACTTGGATGGGGGGAAGGCTT
GAAATTGGAGAGAAAGGGCATTTTCACCAGTCTTTCCAGCCTGTGGGGCC
AGGCCCAAATGGCGGTACGGGAAGGAGGAGGGCTCAGAGGGTTGTACCGG
GGGTACCCCGTGGTGCTTCTGAAGGTGTTGCCGACGACAGTGGTCTCCTA
TCGAGTGAGCTCCGGAGTCACTCAGTGGTTGGAGGAATCGGCCTAGCTTT
GACCAGACGAACAAGTACATTGATCCTTGCGACAAGGTGGGCGGTGCTGT
GGCTACACGCTGAGGGTGCCACGAGGTAATAGGGATGTGACATCGAAATG
GAGGGAGGAGGACGTGATGCGGGAAATTTGGTAGGAAGGTAATGCCTGCA
TGCTCCCGCACGCGTCATCTTTGTGCACGTTATCGGCAAAAGATTGTGTG
GCATAGAATGTACAACGCAGCATACGA
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protein sequence of rna3772

>rna3772-protein ID=rna3772-protein|Name=rna3772|organism=Nannochloropsis gaditana|type=polypeptide|length=191bp
MVLIINGEVVSDSDPRAIKARGGGAPSSSSHSAAPGINQRRQPATIHNRG
EREEPNASKGTSQGEGRSFFQGKAYTTSEGAVKDSPRPLSTSSVSESTYY
PSPPFLQQAAEALGTQGRFVTIPAVPLLGLSASTFDLLPCLCAALGTLYF
GWRGVGALVFFYVLVKKNQGARHGNADGVGQPRRDNHSRAR
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mRNA from alignment at CM002462.1:10564..11761-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna3772 ID=rna3772|Name=rna3772|organism=Nannochloropsis gaditana|type=mRNA|length=1198bp|location=Sequence derived from alignment at CM002462.1:10564..11761- (Nannochloropsis gaditana)
TGTAAGGGAAAAAGGGAGAGTTTATGTGCGAGAGCAGAGGGGAGGTTGAA
ACGCATTGTTAGAAATACCAGTTTGATCACGCGGAGATCAGGCCCTGTCT
GCCTAATGCTAAATAGCTCACATGCCTCTTGCTACCTCATTCTTTGAATT
GATGGCTACATTATTATTATTAGACATTATTATAATTTAAGCCGATGCCT
ACATTTTTCTCCGCATTAATCGTTGAAGACTTGTGTGCGCGGCAGCTCAT
ATCTGGGCAGGGACGACAGGAGCAGCCAAAGAGAACGCGGCGGGAGAAAG
CCTTCGCAAAATTGTATAACCTCAAAGAATAGTTCTTTCTTTCATCGATA
GGTAGAAGACTCCGCTCTCTCCTGGTTATTCTGGCACTGTTCTCCAATGG
GTGAGTCATTTTGCCCCGGTTTTGAACGTTCTTTTTCCCATTGATTCCGT
CCTTCCCTTGCCTCACCTGCCGTTTCGCCCGACATGATTTATACACTTCA
AGTCTTAATAATTAATGGAGAGGTCGTTTCAGACTCAGATCCACGTGCCA
TCAAGGCCCGGGGAGGCGGAGCACCATCCTCTTCATCACACTCAGCGGCG
CCAGGTATAAATCAACGCCGGCAGCCTGCTACAATCCACAACAGGGGGGA
GCGGGAAGAGCCGAATGCCTCCAAGGGCACGAGCCAGGGTGAAGGCCGGA
GCTTTTTCCAAGGAAAAGCCTACACTACAAGTGAAGGGGCTGTGAAGGAC
TCCCCTCGTCCACTCTCAACTTCTTCAGTTTCCGAGAGCACGTACTACCC
ATCGCCTCCCTTTTTGCAGCAGGCAGCTGAGGCTTTGGGCACTCAAGGGC
GCTTTGTGACCATCCCTGCCGTGCCCCTTTTGGGCCTATCGGCGAGTACC
TTCGACCTTCTTCCTTGTTTGTGTGCCGCGTTGGGTACGCTCTACTTTGG
CTGGAGAGGGGTGGGGGCCCTCGTGTTTTTTTACGTGCTAGTCAAGAAAA
ACCAGGGCGCACGGCACGGTAACGCTGACGGCGTCGGGCAACCTCGAAGG
GACAACCACTCACGGGCACGCTAGGAAAGGTCGAGAATTGCGGTGGCGTA
TAATCCAACGGGGAGGCAATTAAACTTTATGTACAGAGATAAGATTGAAC
CAAATACGCACCAAAAATGAAAGAAATTACATCGTATGCTGCGTTGTA
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Coding sequence (CDS) from alignment at CM002462.1:10564..11761-

>rna3772 ID=rna3772|Name=rna3772|organism=Nannochloropsis gaditana|type=CDS|length=1152bp|location=Sequence derived from alignment at CM002462.1:10564..11761- (Nannochloropsis gaditana)
TCTTAATAATTAATGGAGAGGTCGTTTCAGACTCAGATCCACGTGCCATC
AAGGCCCGGGGAGGCGGAGCACCATCCTCTTCATCACACTCAGCGGCGCC
AGGTATAAATCAACGCCGGCAGCCTGCTACAATCCACAACAGGGGGGAGC
GGGAAGAGCCGAATGCCTCCAAGGGCACGAGCCAGGGTGAAGGCCGGAGC
TTTTTCCAAGGAAAAGCCTACACTACAAGTGAAGGGGCTGTGAAGGACTC
CCCTCGTCCACTCTCAACTTCTTCAGTTTCCGAGAGCACGTACTACCCAT
CGCCTCCCTTTTTGCAGCAGGCAGCTGAGGCTTTGGGCACTCAAGGGCGC
TTTGTGACCATCCCTGCCGTGCCCCTTTTGGGCCTATCGGCGAGTACCTT
CGACCTTCTTCCTTGTTTGTGTGCCGCGTTGGGTACGCTCTACTTTGGCT
GGAGAGGGGTGGGGGCCCTCGTGTTTTTTTACGTGCTAGTCAAGAAAAAC
CAGGGCGCACGGCACGGTAACGCTGACGGCGTCGGGCAACCTCGAAGGGA
CAACCACTCACGGGCACGCTAGATGGTCTTAATAATTAATGGAGAGGTCG
TTTCAGACTCAGATCCACGTGCCATCAAGGCCCGGGGAGGCGGAGCACCA
TCCTCTTCATCACACTCAGCGGCGCCAGGTATAAATCAACGCCGGCAGCC
TGCTACAATCCACAACAGGGGGGAGCGGGAAGAGCCGAATGCCTCCAAGG
GCACGAGCCAGGGTGAAGGCCGGAGCTTTTTCCAAGGAAAAGCCTACACT
ACAAGTGAAGGGGCTGTGAAGGACTCCCCTCGTCCACTCTCAACTTCTTC
AGTTTCCGAGAGCACGTACTACCCATCGCCTCCCTTTTTGCAGCAGGCAG
CTGAGGCTTTGGGCACTCAAGGGCGCTTTGTGACCATCCCTGCCGTGCCC
CTTTTGGGCCTATCGGCGAGTACCTTCGACCTTCTTCCTTGTTTGTGTGC
CGCGTTGGGTACGCTCTACTTTGGCTGGAGAGGGGTGGGGGCCCTCGTGT
TTTTTTACGTGCTAGTCAAGAAAAACCAGGGCGCACGGCACGGTAACGCT
GACGGCGTCGGGCAACCTCGAAGGGACAACCACTCACGGGCACGCTAGAT
GG
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Synonyms
Publications