EWM27117.1, cds3580 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27117.1 vs. NCBI_GenBank
Match: gi|585109294|gb|EWM27117.1| (nitrite transporter nar1 [Nannochloropsis gaditana]) HSP 1 Score: 709.138 bits (1829), Expect = 0.000e+0 Identity = 353/353 (100.00%), Postives = 353/353 (100.00%), Query Frame = 0
Query: 1 MACKVTISLLVLLSAGQAFNLRPPGVSPNKPGTWAPGVCLRPTWSSHIPRSASSTPLLPFDGFQPPLKDPVAAYDSAVKQGEKKANEPAPIIFLLGIQAGLQVGIGAAMAVATMAGVPGIQAKDPGLAKLIYGFCGLPCGLLMTATMGTMLFTGNTAVVSVALMEKKIKLQQLVKTWVWSYLGNMVGAGFLAALCTYAGVFSSSAAAIASVAASKTAMPFGVAVARGILCNWLVTTAVWIAQAAADLVSKATAIVLIITIFASLGFEHSVANMFVGPFGALNGGPSFLHFFLRNLIPVTIGNIIAGVVMVAFANYLSFETEFGLRGASGSCVRRGCQKREMSTEVVACIFTFQ 353
MACKVTISLLVLLSAGQAFNLRPPGVSPNKPGTWAPGVCLRPTWSSHIPRSASSTPLLPFDGFQPPLKDPVAAYDSAVKQGEKKANEPAPIIFLLGIQAGLQVGIGAAMAVATMAGVPGIQAKDPGLAKLIYGFCGLPCGLLMTATMGTMLFTGNTAVVSVALMEKKIKLQQLVKTWVWSYLGNMVGAGFLAALCTYAGVFSSSAAAIASVAASKTAMPFGVAVARGILCNWLVTTAVWIAQAAADLVSKATAIVLIITIFASLGFEHSVANMFVGPFGALNGGPSFLHFFLRNLIPVTIGNIIAGVVMVAFANYLSFETEFGLRGASGSCVRRGCQKREMSTEVVACIFTFQ
Sbjct: 1 MACKVTISLLVLLSAGQAFNLRPPGVSPNKPGTWAPGVCLRPTWSSHIPRSASSTPLLPFDGFQPPLKDPVAAYDSAVKQGEKKANEPAPIIFLLGIQAGLQVGIGAAMAVATMAGVPGIQAKDPGLAKLIYGFCGLPCGLLMTATMGTMLFTGNTAVVSVALMEKKIKLQQLVKTWVWSYLGNMVGAGFLAALCTYAGVFSSSAAAIASVAASKTAMPFGVAVARGILCNWLVTTAVWIAQAAADLVSKATAIVLIITIFASLGFEHSVANMFVGPFGALNGGPSFLHFFLRNLIPVTIGNIIAGVVMVAFANYLSFETEFGLRGASGSCVRRGCQKREMSTEVVACIFTFQ 353
BLAST of EWM27117.1 vs. NCBI_GenBank
Match: gi|585113107|gb|EWM30444.1| (formate nitrite transporter [Nannochloropsis gaditana]) HSP 1 Score: 290.426 bits (742), Expect = 3.574e-93 Identity = 157/257 (61.09%), Postives = 192/257 (74.71%), Query Frame = 0
Query: 64 QPPLKDPVAAYDSAVKQGEKKANEPAPIIFLLGIQAGLQVGIGAAMAVATMAGVPGIQAKDPGLAKLIYGFCGLPCGLLMTATMGTMLFTGNTAVVSVALMEKKIKLQQLVKTWVWSYLGNMVGAGFLAALCTYAGVFSSSAAAIASVAASKTAMPFGVAVARGILCNWLVTTAVWIAQAAADLVSKATAIVLIITIFASLGFEHSVANMFVGPFGALN--GGPSFLHFFLRNLIPVTIGNIIAGVVMVAFANYLSF 318
QP +K P AY + + G KKA +PA I LLG+ AGLQVGIGAAMAVAT+ GVP +Q ++P LAKL++G GLPC LLM G LFTGNTAVV A E KI LQQL+K+W SY GN++G G LA LC YAGVFS +A +VA +K A+PFGVAVARGI+CNWLV TAVW++ AAADLVSKA A ++IITIFASLGFEHS+ANMFVGPFGA+ F+ FF++NL+PVTIGNI+ G ++A +L+F
Sbjct: 56 QPLMKAPADAYKTVLALGVKKACQPASKILLLGVMAGLQVGIGAAMAVATLGGVPLMQEQNPALAKLLFGIAGLPCSLLMVMATGAELFTGNTAVVGTAFFEGKISLQQLLKSWSCSYAGNLIGGGLLALLCNYAGVFSQAAGTFTAVADAKAALPFGVAVARGIICNWLVCTAVWVSTAAADLVSKAVATLMIITIFASLGFEHSIANMFVGPFGAMQKTSRTGFVAFFVKNLVPVTIGNILGGSFLMAGMQHLAF 312
BLAST of EWM27117.1 vs. NCBI_GenBank
Match: gi|298713787|emb|CBJ27159.1| (nitrite transporter NAR1 [Ectocarpus siliculosus]) HSP 1 Score: 208.764 bits (530), Expect = 4.156e-61 Identity = 121/262 (46.18%), Postives = 165/262 (62.98%), Query Frame = 0
Query: 65 PPLKDPVAAYDSAVKQGEKKANEPAPIIFLLGIQAGLQVGIGAAMAVATMAGVPGIQAKDPGLAKLIYGFCGLPCGLLMTATMGTMLFTGNTAVVSVALMEKKIKLQQLVKTWVWSYLGNMVGAGFLAALCTYAGVFSSSAAAIASVAASKTAMPFGVAVARGILCNWLVTTAVWIAQAAADLVSKATAIVLIITIFASLGFEHSVANMFVGPFG-ALNGGPSFLHFFLRNLIPVTIGNIIAGVVMVAFANYLSFETEFGLR 325
P +K P Y +AV G+KKA+ +FL+GI +G +G GA +AV+ PG+ A +PGL K+I+G GLP GL MT G LFTGNTAVV+ A++E K + L+K WV+SYLGN VG+ L L GV + +A+ +A +KT++ F A ARGILCNWLV AVW++ +A+D K AI L I+ F +LG +HSVANMF+ P G AL G ++ F L NL+PVT+GNI+ G V V +F + FG +
Sbjct: 83 PSVKPPPQMYQNAVDIGQKKASGSVAKLFLMGIISGCHIGFGALLAVSIGGNCPGLLATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMG-IATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAGVTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSLFGKK 343
BLAST of EWM27117.1 vs. NCBI_GenBank
Match: gi|922852584|gb|KOO21263.1| (nitrite transporter nar1 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 204.527 bits (519), Expect = 4.847e-60 Identity = 115/246 (46.75%), Postives = 156/246 (63.41%), Query Frame = 0
Query: 74 YDSAVKQGEKKANEPAPIIFLLGIQAGLQVGIGAAMAVATMAGVPGIQAKDPGLAKLIYGFCGLPCGLLMTATMGTMLFTGNTAVVSVALMEKKIKLQQLVKTWVWSYLGNMVGAGFLAALCTYAGVFSSSAAAIASVAASKTAMPFGVAVARGILCNWLVTTAVWIAQAAADLVSKATAIVLIITIFASLGFEHSVANMFVGPFGALNGGP-SFLHFFLRNLIPVTIGNIIAGVVMVAFANYLSF 318
++ AV GEKKAN PA IF LGI +G +G GA + ++ PG+ A +PGL K++ G GLP GL+MT G LFTGNTA+V++AL+E K + QL+K+W S+ GN VG+ LA L Y S A+IA V+A+KT++ F A RG+LCNWLVT AV++A A D K I I+ F +LG EHS+ANMF+ P G +G S+ F L+NL+PVT+GN G V VA A +++
Sbjct: 57 FNGAVAAGEKKANMPADKIFHLGILSGAHIGFGAFLMLSIGGACPGLAATNPGLQKIVLGAFGLPFGLMMTLLSGGELFTGNTALVTMALLEGKATMGQLIKSWSASFAGNFVGSVLLAVLVFYGNTLSGGGASIA-VSAAKTSLTFTQAFVRGVLCNWLVTMAVYLASFAKDTAGKMVPIWFCISAFVALGLEHSIANMFIIPLGIFSGASVSWPTFLLKNLLPVTLGNTFGGAVCVALAFCMAY 301
BLAST of EWM27117.1 vs. NCBI_GenBank
Match: gi|1210516076|dbj|GAX24892.1| (hypothetical protein FisN_2Lh163 [Fistulifera solaris]) HSP 1 Score: 202.601 bits (514), Expect = 2.653e-59 Identity = 113/248 (45.56%), Postives = 156/248 (62.90%), Query Frame = 0
Query: 64 QPPLKDPVAAYDSAVKQGEKKANEPAPIIFLLGIQAGLQVGIGAAMAVATMAGVPGIQAKDPGLAKLIYGFCGLPCGLLMTATMGTMLFTGNTAVVSVALMEKKIKLQQLVKTWVWSYLGNMVGAGFLAALCTYAGVFSSSAAAIASVAASKTAMPFGVAVARGILCNWLVTTAVWIAQAAADLVSKATAIVLIITIFASLGFEHSVANMFVGPFGALNGGP-SFLHFFLRNLIPVTIGNIIAGVVMV 310
+P LK PVA Y+ AV G KKA IF LG+ +G +G G +A++ PG+ +PGL K+I G GLP GL+MT G LFTGNTA+V+ A ME KI+ + LVK+WV SYLGN VG+ LA L + G+ +A ++A +K ++P+GVA RG++CNWLV AV++A + +V K TA+ I+ F +LG +HSVANM + P G + G + F +NLIPVT+GNI+ G V V
Sbjct: 39 EPELKLPVALYEGAVAAGVKKATASFSKIFTLGVVSGCHIGFGIFLAISVGGACPGLLESNPGLQKIITGAFGLPFGLIMTLVTGGELFTGNTALVTAAYMEGKIQRKDLVKSWVASYLGNFVGSLLLAYL-AFQGMTLGAAPGAVTLATAKCSVPWGVAFTRGLMCNWLVCMAVYMASGCSSMVGKMTAVWFPISAFVALGLDHSVANMCLIPLGMMRGAEITIAQMFTKNLIPVTLGNIVGGAVAV 285
BLAST of EWM27117.1 vs. NCBI_GenBank
Match: gi|1210511313|dbj|GAX29604.1| (hypothetical protein FisN_2Hh163 [Fistulifera solaris]) HSP 1 Score: 200.675 bits (509), Expect = 1.476e-58 Identity = 115/266 (43.23%), Postives = 163/266 (61.28%), Query Frame = 0
Query: 46 SHIPRSASSTPLLPFDGFQPPLKDPVAAYDSAVKQGEKKANEPAPIIFLLGIQAGLQVGIGAAMAVATMAGVPGIQAKDPGLAKLIYGFCGLPCGLLMTATMGTMLFTGNTAVVSVALMEKKIKLQQLVKTWVWSYLGNMVGAGFLAALCTYAGVFSSSAAAIASVAASKTAMPFGVAVARGILCNWLVTTAVWIAQAAADLVSKATAIVLIITIFASLGFEHSVANMFVGPFGALNGGP-SFLHFFLRNLIPVTIGNIIAGVVMV 310
+ +P + S P L +P LK PVA Y+ AV G KKA IF LG+ +G +G G +A++ PG+ +PGL K+I G GLP GL+MT G LFTGNTA+V+ A ME +I+ + LVK+WV SYLGN VG+ LA L + G+ +A ++A +K ++P+GVA RG++CNWLV AV++A + ++ K TA+ I+ F +LG +HSVANM + P G + G + F +NLIPVT+GNI+ G V V
Sbjct: 26 AKVPAVSLSAPSL----VEPELKLPVALYEGAVAAGVKKATASFSKIFTLGVVSGCHIGFGIFLAISVGGACPGLLQSNPGLQKIITGAFGLPFGLIMTLVTGGELFTGNTALVTAAYMEGQIERKDLVKSWVASYLGNFVGSLLLAYL-AFQGMTLGAAPGAVTLATAKCSVPWGVAFTRGLMCNWLVCMAVYMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMCLIPLGMMRGAEITIAQMFTKNLIPVTLGNIVGGAVAV 286
BLAST of EWM27117.1 vs. NCBI_GenBank
Match: gi|1072229988|gb|OEU14722.1| (Form_Nir_trans-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 192.2 bits (487), Expect = 3.874e-55 Identity = 115/247 (46.56%), Postives = 154/247 (62.35%), Query Frame = 0
Query: 65 PPLKDPVAAYDSAVKQGEKKANEPAPIIFLLGIQAGLQVGIGAAMAVATMAGVPGIQAKDPGLAKLIYGFCGLPCGLLMTATMGTMLFTGNTAVVSVALMEKKIKLQQLVKTWVWSYLGNMVGAGFLAALCTYAGVFSSSAAAIASVAASKTAMPFGVAVARGILCNWLVTTAVWIAQAAADLVSKATAIVLIITIFASLGFEHSVANMFVGPFGALNGGPSFLHFFL-RNLIPVTIGNIIAGVVMV 310
P LK P A Y AV G KA++ IF LGI +G + GA +A+ PGI A++PGL K+I+G GLP GL+MT G LFTGNTA+V+ A E KI+ + L+K WV SY GN VG+ LA L +G +S A+ A++A +K ++P+ VA RGILCNWLV AV++A ++ K TA+ I+ F +LG +HSVANMF+ P G L G FL +NLIPVT+GNI+ G + V
Sbjct: 57 PELKPPAALYQGAVAAGVAKASKSWIDIFKLGIVSGCHIAFGAYLAITVGGACPGIAAENPGLQKIIFGSFGLPFGLIMTLVTGGELFTGNTALVTAAYKEGKIEGKALIKNWVASYAGNFVGSLLLAYLAFKSGTLASGPAS-AAIATAKCSLPWDVAFVRGILCNWLVCMAVYMASGCTSMIGKMTAVYFPISAFVALGLDHSVANMFIIPLGMLRGAEITTQAFLFKNLIPVTLGNIVGGALCV 302
BLAST of EWM27117.1 vs. NCBI_GenBank
Match: gi|698946575|gb|AIU34483.1| (nitrite transporter [Isochrysis zhanjiangensis]) HSP 1 Score: 189.889 bits (481), Expect = 2.340e-54 Identity = 110/243 (45.27%), Postives = 151/243 (62.14%), Query Frame = 0
Query: 64 QPPLKD--PVAAYDSAVKQGEKKANEPAPIIFLLGIQAGLQVGIGAAMAVATMAGVPGIQAKDPGLAKLIYGFCGLPCGLLMTATMGTMLFTGNTAVVSVALMEKKIKLQQLVKTWVWSYLGNMVGAGFLAALCTYAGVFSSSAAAIASVAASKTAMPFGVAVARGILCNWLVTTAVWIAQAAADLVSKATAIVLIITIFASLGFEHSVANMFVGPFGALNGGP-SFLHFFLRNLIPVTIGNI 303
QP ++ P ++ AV G KKA A IF LGI +G +G GA + ++ P + A +PGL K++ G GLP GL+MT G LFTGNTA+V+ AL+E K+K +LVK+W SY GN VG+ LA+L G +++A+ +A+ A KT++ F A RGILCNWLV V++A A DL K AI I+ F +L EHSVANMF+ P G ++G ++ F L+NLIPVT+GNI
Sbjct: 43 QPAMQLVLPAEGFEGAVSAGAKKAANSASKIFALGIMSGAHIGFGAFLMLSVGGCSPALAAANPGLQKIVLGAFGLPFGLMMTLVTGAELFTGNTALVTAALIEGKVKASELVKSWAASYAGNFVGSLALASLVFAGGTLATAASPVAT-ATLKTSLSFKQAFVRGILCNWLVCMGVYMASMAKDLPGKMVAIWFPISAFVALSLEHSVANMFIIPLGIMSGAAVTWKAFLLKNLIPVTLGNI 284
BLAST of EWM27117.1 vs. NCBI_GenBank
Match: gi|223997254|ref|XP_002288300.1| (formate/nitrite transporter family member [Thalassiosira pseudonana CCMP1335] >gi|220975408|gb|EED93736.1| formate/nitrite transporter family member [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 186.808 bits (473), Expect = 1.646e-53 Identity = 115/264 (43.56%), Postives = 156/264 (59.09%), Query Frame = 0
Query: 65 PPLKDPVAAYDSAVKQGEKKANEPAPIIFLLGIQAGLQVGIGAAMAVATMAGVPGIQAKDPGLAKLIYGFCGLPCGLLMTATMGTMLFTGNTAVVSVALMEKKIKLQQLVKTWVWSYLGNMVGAGFLAALCTYAGVFSSSAAAIASVAASKTAMPFGVAVARGILCNWLVTTAVWIAQAAADLVSKATAIVLIITIFASLGFEHSVANMFVGPFGALNGGP-SFLHFFLRNLIPVTIGNIIAGVVMV------AFANYLSFETE 321
P LK P A Y+ AV G KA+ IF LGI AG +G G+ +A+ P I +PGL K+I+G GLP GL+MT G LFTGNTA+V+ A+ME K + L+K WV SY GN+VG+ LA L +G ++ A++A +A +K ++PF A RGILCNWLV AV++A A L K A+ I+ F +LG +HSVANMF+ P G + G + F +NLIPVT+GNI+ G + V AF + + E
Sbjct: 9 PDLKAPPAIYEGAVAAGAAKASASWEKIFKLGIAAGCHIGFGSYLAITVGGACPQIAEANPGLQKIIFGAFGLPFGLIMTLVTGAELFTGNTALVTAAVMEGKTTTKDLIKNWVASYAGNVVGSLILAYLAFKSGTLGNAPASVA-IATAKCSLPFETAFVRGILCNWLVCMAVYMASGCASLAGKMVAVWFPISAFVALGLDHSVANMFIIPLGMMRGAQITVGDFITKNLIPVTLGNIVGGALCVMGIYGSAFGKWFKSKDE 271
BLAST of EWM27117.1 vs. NCBI_GenBank
Match: gi|1004141565|gb|KXZ49556.1| (hypothetical protein GPECTOR_20g410 [Gonium pectorale]) HSP 1 Score: 185.652 bits (470), Expect = 3.788e-52 Identity = 109/248 (43.95%), Postives = 150/248 (60.48%), Query Frame = 0
Query: 72 AAYDSAVKQGEKKANEPAPIIFLLGIQAGLQVGIGAAMAVATMAGVPGIQAKDPGLAKLIYGFCGLPCGLLMTATMGTMLFTGNTAVVSVALMEKKIKLQQLVKTWVWSYLGNMVGAGFLAALCTYAGVFSSSAAAIASVAASKTAMPFGVAVARGILCNWLVTTAVWIAQAAADLVSKATAIVLIITIFASLGFEHSVANMFVGPFGALNGGP-SFLHFFLRNLIPVTIGNIIAGVVMVAFANYLSF 318
AAY++ V G KA P FL+G AG+ + G +AV T G+ P L +++ G P GLL+T G L+TGNTA V+ A+MEKK ++ L+K W +SYLGN+VG+ + L G+ ++SA A++A +KT++ FG A+ RG+LCNWLV +AVW+A AA L K A L + F +LG EHSVANMF G + G P S F +RNL+PVT+GN +AG V +A A L F
Sbjct: 86 AAYNNVVNTGAAKAGMPVWKTFLMGTMAGIYISFGGFLAVTTATMCAGLGVTSPILTRMLMGAL-FPFGLLITLVCGAELYTGNTAFVAAAVMEKKASVKDLLKNWTFSYLGNLVGSLAMVGLVAATGLLATSAVP-ANMAVAKTSLTFGQALVRGLLCNWLVVSAVWMASAATSLSGKMLAAYLPVMAFIALGLEHSVANMFFCSLGIVQGAPVSVADFVVRNLVPVTLGNTLAGCVCMAGAYALCF 331 The following BLAST results are available for this feature:
BLAST of EWM27117.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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