EWM27106.1, cds3555 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27106.1 vs. NCBI_GenBank
Match: gi|553186900|ref|XP_005854512.1| (cral family protein [Nannochloropsis gaditana CCMP526] >gi|422294547|gb|EKU21847.1| cral family protein [Nannochloropsis gaditana CCMP526] >gi|585109283|gb|EWM27106.1| cral-trio family protein [Nannochloropsis gaditana]) HSP 1 Score: 1335.86 bits (3456), Expect = 0.000e+0 Identity = 664/664 (100.00%), Postives = 664/664 (100.00%), Query Frame = 0 Query: 1 MQLRCIAWVLVGASVVASDGMLLAASDGPPTMPTLTGSGVMSSLVAAAAASGGKGQRKASALFSSEWSSFKWRRKSSQAKSRTPWFIPPELMCVPREKDREGVEAEKRGIDAHAATALSREDADEGLEKATTTSLLEEEVDTATPAGVVSRTEASILEVSSSEIHSHEDRDVKKNMTTTLAGVKSIVEGEEADEREEEKLREDAEPPSPPRLRPVSKPSAKRAPILRKRREDDELSIPCGRSLSSALSVIGGGLPLRRGGSDTVCATGGERAASSVHSPSTTTTRGIHSAGEVEIDAWEERIEEGEGALSVTRSTWHYEAVVIEAGASDGRVEAEGHLEVSQGPRLGILDDGLEEEEGETELAARLRAETAQRVGGLSVEKRAALERVRIALYGPDVDPRRVAAVDQLVVCGDRDAMILSFLARKDFDADTALRSFDRVIRWRMAQDIEEVFEGERLARRKVEKHRACWPTAFYFSQDHAGDPIFVDRMGLLELARLRTGPEALGLTDMITYYIQTMEGRRRLLFPHLSRRSGRLISQYVSVVDVKHFGPQHFGRHALQFMRSLGDVHDENYSDLVKSLYIINAPFFFHKVFHLISCMMSQELKDRLKVLNKRESLRELSQILPPDLARRIVEGDPAGEREGERELHAFLDRAARAGLHRRRWV 664 MQLRCIAWVLVGASVVASDGMLLAASDGPPTMPTLTGSGVMSSLVAAAAASGGKGQRKASALFSSEWSSFKWRRKSSQAKSRTPWFIPPELMCVPREKDREGVEAEKRGIDAHAATALSREDADEGLEKATTTSLLEEEVDTATPAGVVSRTEASILEVSSSEIHSHEDRDVKKNMTTTLAGVKSIVEGEEADEREEEKLREDAEPPSPPRLRPVSKPSAKRAPILRKRREDDELSIPCGRSLSSALSVIGGGLPLRRGGSDTVCATGGERAASSVHSPSTTTTRGIHSAGEVEIDAWEERIEEGEGALSVTRSTWHYEAVVIEAGASDGRVEAEGHLEVSQGPRLGILDDGLEEEEGETELAARLRAETAQRVGGLSVEKRAALERVRIALYGPDVDPRRVAAVDQLVVCGDRDAMILSFLARKDFDADTALRSFDRVIRWRMAQDIEEVFEGERLARRKVEKHRACWPTAFYFSQDHAGDPIFVDRMGLLELARLRTGPEALGLTDMITYYIQTMEGRRRLLFPHLSRRSGRLISQYVSVVDVKHFGPQHFGRHALQFMRSLGDVHDENYSDLVKSLYIINAPFFFHKVFHLISCMMSQELKDRLKVLNKRESLRELSQILPPDLARRIVEGDPAGEREGERELHAFLDRAARAGLHRRRWV Sbjct: 1 MQLRCIAWVLVGASVVASDGMLLAASDGPPTMPTLTGSGVMSSLVAAAAASGGKGQRKASALFSSEWSSFKWRRKSSQAKSRTPWFIPPELMCVPREKDREGVEAEKRGIDAHAATALSREDADEGLEKATTTSLLEEEVDTATPAGVVSRTEASILEVSSSEIHSHEDRDVKKNMTTTLAGVKSIVEGEEADEREEEKLREDAEPPSPPRLRPVSKPSAKRAPILRKRREDDELSIPCGRSLSSALSVIGGGLPLRRGGSDTVCATGGERAASSVHSPSTTTTRGIHSAGEVEIDAWEERIEEGEGALSVTRSTWHYEAVVIEAGASDGRVEAEGHLEVSQGPRLGILDDGLEEEEGETELAARLRAETAQRVGGLSVEKRAALERVRIALYGPDVDPRRVAAVDQLVVCGDRDAMILSFLARKDFDADTALRSFDRVIRWRMAQDIEEVFEGERLARRKVEKHRACWPTAFYFSQDHAGDPIFVDRMGLLELARLRTGPEALGLTDMITYYIQTMEGRRRLLFPHLSRRSGRLISQYVSVVDVKHFGPQHFGRHALQFMRSLGDVHDENYSDLVKSLYIINAPFFFHKVFHLISCMMSQELKDRLKVLNKRESLRELSQILPPDLARRIVEGDPAGEREGERELHAFLDRAARAGLHRRRWV 664
BLAST of EWM27106.1 vs. NCBI_GenBank
Match: gi|146173043|ref|XP_001018732.2| (CRAL/TRIO, amine-terminal domain protein [Tetrahymena thermophila SB210] >gi|146144920|gb|EAR98487.2| CRAL/TRIO, amine-terminal domain protein [Tetrahymena thermophila SB210]) HSP 1 Score: 94.7449 bits (234), Expect = 2.721e-17 Identity = 62/239 (25.94%), Postives = 118/239 (49.37%), Query Frame = 0 Query: 415 DAMILSFLARKDFDADTALRSFDRVIRWRMAQDIEEVFEGERLARRKVEKHRACWPTAFYFSQDHAGDPIFVDRMGLLELARLR--TGPEALGLTDMITYYIQTMEGRRRLLFPHLSRRSGRLISQYVSVVDVKHFGPQHFGRHALQFMRSLGDVHDENYSDLVKSLYIINAPFFFHKVFHLISCMMSQELKDRLKVLNK--RESLRELSQI--LPP--------DLARRIVEGDPAGE 639 D +L FL + FD + F + WR+ D++ + + + ++ + R +P Y D G PI+++R+G+L+L +L T E L I YYIQ+ E +FP S+ G + Q V+++D+K + + F++ V ENY +++ ++I+NAP F V+ +I + ++ ++++ ++ +E L E+ I +P DL++ I +P GE Sbjct: 40 DHYLLRFLRARKFDLVKTEKMFSDFLDWRIKNDVQNIM---KFSFNELAEVRHHYPHG-YHKTDKLGRPIYIERIGMLKLTQLFQVTTEERL-----IKYYIQSYEILLNRIFPTCSQAIGHRVDQTVTILDLKGIPMKMLSKQVYNFIQLASKVAQENYPEILGRMFIVNAPMLFSGVWAVIKPWIDEKTRNKITIIGSGFKEKLLEIIDIDNIPDFLGGNSKCDLSKNIGPWNPTGE 269
BLAST of EWM27106.1 vs. NCBI_GenBank
Match: gi|145540854|ref|XP_001456116.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124423926|emb|CAK88719.1| unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 93.5893 bits (231), Expect = 7.881e-17 Identity = 51/196 (26.02%), Postives = 98/196 (50.00%), Query Frame = 0 Query: 415 DAMILSFLARKDFDADTALRSFDRVIRWRMAQDIEEVFEGERLARRKVEKHRACWPTAFYFSQDHAGDPIFVDRMGLLELARLRTGPEALGLTDMITYYIQTMEGRRRLLFPHLSRRSGRLISQYVSVVDVKHFGPQHFGRHALQFMRSLGDVHDENYSDLVKSLYIINAPFFFHKVFHLISCMMSQELKDRLKVL 610 D +L FL + FD F+ I+WR D++ + ++ + R +P Y D G PI+++R+G+L+L +L E +I YYIQ+ E + +FP S+ G I Q +++D+K + + F++ +V NY +++ +YI+NAP F ++ +I + ++ K+++ +L Sbjct: 42 DPYLLRFLRARKFDIAKTQVMFNDFIKWRKENDVDNIM---TYMFDELPQVRTHYPHG-YHKTDKIGRPIYIERIGMLQLNKLF---EITSEQRLIKYYIQSYELLLKRIFPACSQAKGTRIDQTFTILDLKGGSMKMVSKQVYNFIQLASNVGQNNYPEILGKMYIVNAPMMFTGIWAMIKIWLDEKTKNKITIL 230
BLAST of EWM27106.1 vs. NCBI_GenBank
Match: gi|145537674|ref|XP_001454548.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124422314|emb|CAK87151.1| unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 91.2781 bits (225), Expect = 1.062e-16 Identity = 50/196 (25.51%), Postives = 99/196 (50.51%), Query Frame = 0 Query: 415 DAMILSFLARKDFDADTALRSFDRVIRWRMAQDIEEVFEGERLARRKVEKHRACWPTAFYFSQDHAGDPIFVDRMGLLELARLRTGPEALGLTDMITYYIQTMEGRRRLLFPHLSRRSGRLISQYVSVVDVKHFGPQHFGRHALQFMRSLGDVHDENYSDLVKSLYIINAPFFFHKVFHLISCMMSQELKDRLKVL 610 D +L FL + FD + F+ I+WR D++ + ++ + R +P Y D G P++++R+G+L+L +L E +I YYIQ+ E + +FP S+ G I Q +++D+K + + F++ +V NY +++ +YI+NAP F ++ +I + ++ K+++ +L Sbjct: 42 DPYLLRFLRARKFDINKTQLMFNDFIKWRKENDVDNIMT---YMFEELPQVRTYYPHG-YHKTDKMGRPLYIERIGMLQLNKLF---EITSEQRLIKYYIQSYELLLKRIFPACSQAKGTRIDQTFTILDLKGGSMKMVSKQVYNFIQLASNVGQNNYPEILGKMYIVNAPMMFTGIWAMIKIWLDEKTKNKITIL 230
BLAST of EWM27106.1 vs. NCBI_GenBank
Match: gi|145483181|ref|XP_001427613.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124394695|emb|CAK60215.1| unnamed protein product (macronuclear) [Paramecium tetraurelia]) HSP 1 Score: 92.0485 bits (227), Expect = 2.251e-16 Identity = 48/196 (24.49%), Postives = 98/196 (50.00%), Query Frame = 0 Query: 415 DAMILSFLARKDFDADTALRSFDRVIRWRMAQDIEEVFEGERLARRKVEKHRACWPTAFYFSQDHAGDPIFVDRMGLLELARLRTGPEALGLTDMITYYIQTMEGRRRLLFPHLSRRSGRLISQYVSVVDVKHFGPQHFGRHALQFMRSLGDVHDENYSDLVKSLYIINAPFFFHKVFHLISCMMSQELKDRLKVL 610 D +L FL + FD + F+ I+WR D++ + ++ + R +P Y D G PI+++R+G+L+L +L E +I YYIQ+ E + +FP S+ G I Q +++D+K + + F++ ++ NY +++ +YI+N P F ++ ++ + ++ K+++ +L Sbjct: 42 DPYLLRFLRARKFDLGKTQQMFNDFIKWRKENDVDNIM---TYMFDELPQVRTHYPHG-YHKTDKMGRPIYIERIGMLQLNKLF---EVTTEQRLIKYYIQSYELLLKRIFPACSQAKGTKIEQSFTILDLKGGSMKMVSKQVYNFIQLASNIGQNNYPEILGKMYIVNVPVMFSGIWAMVKIWLDEKTKNKITIL 230
BLAST of EWM27106.1 vs. NCBI_GenBank
Match: gi|813168631|ref|XP_012203915.1| (hypothetical protein SPRG_09433 [Saprolegnia parasitica CBS 223.65] >gi|641531414|gb|KDO25490.1| hypothetical protein SPRG_09433 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 90.1225 bits (222), Expect = 2.904e-16 Identity = 61/239 (25.52%), Postives = 113/239 (47.28%), Query Frame = 0 Query: 380 EKRAALERVRIALYGPDVDPRRVAAVDQLVVC--GDRDAMILSFLARKDFDADTALRSFDRVIRWRMAQDIEEVFEGERLARRKVEKHRACWPTAFYFSQDHAGDPIFVDRMGLLELARLRTGPEALGLTDMITYYIQTMEGRRRLLFPHLSRRSGRLISQYVSVVDVKHFGPQHFGRHALQFMRSLGDVHDENYSDLVKSLYIINAPFFFHKVFHLISCMMSQELKDRLKVLNKRESL 616 EK + R+R L + R VA L C G D I + +D+DAD L + I WR+ QD+ + G L K+E R P F+ +D G ++++R G L+ L + + D++ ++Q E + +L P G S+ V + D+ + G F ++ + +++ E+Y + + +YI+NAPFFF+ + LI +S ++ ++ + +++ L Sbjct: 3 EKTGTIARLREQLLLETPEARLVA----LGFCQLGRLDDTIEKYAIARDWDADATLSAMRSSIAWRVEQDVPSLMAGPALPNEKLEAIRRFNPQGFH-GEDKDGRLVYIERTGYLDCDALL---KVVTPDDILKAHVQKCEYKLNVLLPRQVVARGAAASKIVLIYDLANVGFSTFKTDVFTAIQRITNINQEHYPETLHKVYIVNAPFFFYGTYKLIEVFLSDRIRHKIAFVGRKDEL 233
BLAST of EWM27106.1 vs. NCBI_GenBank
Match: gi|298708015|emb|CBJ30377.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 93.2041 bits (230), Expect = 5.845e-16 Identity = 43/117 (36.75%), Postives = 70/117 (59.83%), Query Frame = 0 Query: 402 VAAVDQLVVCGDRDAMILSFLARKDFDADTALRSFDRVIRWRMAQDIEEVFEGERLARRKVEKHRACWPTAFYFSQDHAGDPIFVDRMGLLELARLRTGPEALGLTDMITYYIQTME 518 V A++ + +CGDRD ++L+FL FD A S R WR + +++F+ ++ K++K+R WPT F+ QD AG P+F DR+G +L++LR P+ L +M+ + Q ME Sbjct: 233 VEALNTVAICGDRDGVVLAFLRHSKFDVRKAKESMRRCCAWRKENEADDLFK-RAVSPAKMKKYRTHWPTGFH-KQDRAGRPVFYDRVGQSDLSKLREDPDGLDQDEMVQIFTQNME 347 HSP 2 Score: 80.4925 bits (197), Expect = 5.740e-12 Identity = 37/111 (33.33%), Postives = 67/111 (60.36%), Query Frame = 0 Query: 517 MEGRRRLLFPHLSRRSGRLISQYVSVVDVKHFGPQHF--GRHALQFMRSLGDVHDENYSDLVKSLYIINAPFFFHKVFHLISCMMSQELKDRLKVLNKRES-LRELSQILP 624 M+ RRR + LSR +GR + Q +V+D+ G +H + A+ + R + D+ +NYS + SL I+NAP+ F K + ++ +S++ ++KVL K E+ L++L + +P Sbjct: 468 MQVRRRFVLTRLSREAGRPVDQMTTVLDLTGLGMKHMRQAKEAMAYTRRISDIFQDNYSGMTCSLLILNAPWVFSKGWQVVESFLSEDTVAKVKVLGKGEAGLQQLEEYIP 578
BLAST of EWM27106.1 vs. NCBI_GenBank
Match: gi|669153276|ref|XP_008612200.1| (hypothetical protein SDRG_08110 [Saprolegnia diclina VS20] >gi|530736096|gb|EQC34338.1| hypothetical protein SDRG_08110 [Saprolegnia diclina VS20]) HSP 1 Score: 87.8113 bits (216), Expect = 2.048e-15 Identity = 61/241 (25.31%), Postives = 113/241 (46.89%), Query Frame = 0 Query: 380 EKRAALERVRIALYGPDVDPRRVAA----VDQLVVCGDRDAMILSFLARKDFDADTALRSFDRVIRWRMAQDIEEVFEGERLARRKVEKHRACWPTAFYFSQDHAGDPIFVDRMGLLELARLRTGPEALGLTDMITYYIQTMEGRRRLLFPHLSRRSGRLISQYVSVVDVKHFGPQHFGRHALQFMRSLGDVHDENYSDLVKSLYIINAPFFFHKVFHLISCMMSQELKDRLKVLNKRESL 616 EK + R+R L + R VA +DQL D I + +D+DAD L + I WR+ QD+ + G L K+E R P F+ +D G ++++R G L+ L + + D++ ++Q E + +L P G S+ V + D+ + G F ++ + ++ E+Y + + +YI+NAPFFF+ + LI +S ++ ++ + +++ L Sbjct: 18 EKTPTIARLREQLLQETPEVRLVALGFCELDQL------DDTIEKYAIARDWDADATLSAMRSSIAWRVEQDVPSLMAGPALPNEKLEAIRRFNPQGFH-GEDKDGRLVYIERTGYLDCDALL---KVVTPDDILKAHVQKCEYKLHVLLPRQVVARGAAASKIVLIYDLANVGFSTFKTDIFTAIQRITSINQEHYPETLHKVYIVNAPFFFYGTYKLIEVFLSDRIRHKIVFVGRKDEL 248
BLAST of EWM27106.1 vs. NCBI_GenBank
Match: gi|954186630|gb|KRW99487.1| (CRAL-TRIO domain [Pseudocohnilembus persalinus]) HSP 1 Score: 87.8113 bits (216), Expect = 6.444e-15 Identity = 54/210 (25.71%), Postives = 104/210 (49.52%), Query Frame = 0 Query: 415 DAMILSFLARKDFDADTALRSFDRVIRWRMAQDIEEVFEGERLARR-KVEKHRACWPTAFYFSQDHAGDPIFVDRMGLLELARL--RTGPEALGLTDMITYYIQTMEGRRRLLFPHLSRRSGRLISQYVSVVDVKHFGPQHFGRHALQFMRSLGDVHDENYSDLVKSLYIINAPFFFHKVFHLISCMMSQELKDRLKVL--NKRESLREL 619 DA +L FL + FD + L ++ +WR ++ + +V+KH +P Y D G P++++R+G L L L +T E L I YYIQ+ E + +FP S G + Q V+++D+K + + F++ V +NY +++ ++I+NAP F ++ +I + ++ ++++ ++ +E L EL Sbjct: 50 DAYLLRFLKARKFDFNKTLEMWNNTQKWRQENQVDTIISDFTFNELPEVKKH---YPHG-YHKTDKQGRPVYIERVGSLNLKNLFEQTTEERL-----IKYYIQSYEILLQRIFPACSVLKGEKVDQTVTILDLKGASMKMMSKTVYNFIQLASKVAQDNYPEILGRMFIVNAPMLFTGIWQIIKPWLDEKTRNKITIMGGKYKEKLLEL 250
BLAST of EWM27106.1 vs. NCBI_GenBank
Match: gi|1173929341|gb|OQR82584.1| (hypothetical protein ACHHYP_15755 [Achlya hypogyna]) HSP 1 Score: 85.8853 bits (211), Expect = 8.808e-15 Identity = 53/207 (25.60%), Postives = 99/207 (47.83%), Query Frame = 0 Query: 412 GDRDAMILSFLARKDFDADTALRSFDRVIRWRMAQDIEEVFEGERLARRKVEKHRACWPTAFYFSQDHAGDPIFVDRMGLLEL-ARLRTG-PEALGLTDMITYYIQTMEGRRRLLFPHLSRRSGRLISQYVSVVDVKHFGPQHFGRHALQFMRSLGDVHDENYSDLVKSLYIINAPFFFHKVFHLISCMMSQELKDRLKVLNKRESL 616 G D I + +D DAD L + I WR DI + G L K+E R P F+ QD G ++++R G L++ A L+ P+ D++ ++Q E + +L P +G ++ V + D+++ G F ++ + ++ E+Y + + +YI+NAPFFF+ + LI +S ++ ++ + + L Sbjct: 34 GCLDETIARYAVARDNDADATLAAMRGSIAWRQEMDIPSLVAGPALPSEKLEAIRHFNPQGFH-GQDKDGRLVYIERTGYLDIEALLKVATPD-----DVLRAHVQKCEYKLNVLLPRQVAAAGTTAAKIVLIYDLENVGFNTFKTDVFTAIQRITAINQEHYPETLHKVYIVNAPFFFYGTYKLIEVFLSDRIRQKIAFVGSKAEL 234 The following BLAST results are available for this feature:
BLAST of EWM27106.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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