EWM27200.1, cds3536 (CDS) Nannochloropsis gaditana

Overview
NameEWM27200.1
Unique Namecds3536
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:661817..664588 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27200.1
Productprotein of unknown function DUF1336
Orig transcript idgnl|cribi|Naga_100010g106.6170.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:661817..664588 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom
IPR011993PH-like_dom
IPR009769DUF1336
IPR002913START_lipid-bd_dom
IPR001849PH_domain
Homology
BLAST of EWM27200.1 vs. NCBI_GenBank
Match: gi|585109380|gb|EWM27200.1| (protein of unknown function DUF1336 [Nannochloropsis gaditana])

HSP 1 Score: 1884.77 bits (4881), Expect = 0.000e+0
Identity = 923/923 (100.00%), Postives = 923/923 (100.00%), Query Frame = 0
Query:    1 MSAAPAAPASCDRSSLRSRGPGAARAGPPRATPSAAAPVVPVALKDPDALLEGWLKKRGVRIPGHWSERYFVLKDDRLLYYLKASDAVARGAYILDRTCVVSEVKPYTTSYDKRKTLHAFRIVWPEAVELMEGFEGGQAAEHENPAAPVSKEAGPRTSNRFVGPLSAMASLNSLSLSSTLAGARNAQSVEDTPSGEASMDPHVLSTSQSFSQTPHPPQSTTKIIRSANSFLESNKAGMTHRHGKRGATSVNEGAGYHRAGSSVANTNSTATLATGGAMVAMAVGGVVVGAMTAGLGLVAPMVVVGLTAATGSGAAVYGAAVSSSQTGLKIKQVALVLASESKESAKEWRSALEAQIRWSQSFPGADWLSMVGLDRRLPARIGKGGSFKHSRRQDGQRPSNKLDDVERWGRAACWRPWGVYNGLRVYEIDHVTTRSGVVKRPAGLRDGLEGQGNGGSTLFGGGRSRPSFPCRKLQLRVGATPLQTFIALVSVPCRVLNGVIERVRNVEHLDDQTDVIHLSLKPFFFWPTWTAPRDFCLLRSWRYDEDGTYVICYDSTIHPGCPPVDGFVRGSMHSVYTISPKRRSRRGIRSAESDEAPESLLTHILQVDPRGWIWHRLGYLDAFIVEMLCQGLDVRDLLEAERFMTVNVDTDEEGGTTGTAVRGETPELGAEAGGATSSSGGRGSGTLVTHRPTVPADMWGDIDASSFVVRGPNYAATRLKIPSAAVAFRLLAVDLFELPEAVQNIAGHPNNRVQAAMAAGDCPSFVFVVQLQIPGGEQQLGYVTYFAPTDMSVLEEDTPLARLLKPFFFGRDDGYRDLRFKLIPKIVEGNWVVRKSVGSTPAILGTKLKQTYHKGTNYFELDVNIASSSVAAGVVRLAAGYAKTLVVDLALVIQGEAEDELPERVLAGWRINHMDLASAKRLE 923
            MSAAPAAPASCDRSSLRSRGPGAARAGPPRATPSAAAPVVPVALKDPDALLEGWLKKRGVRIPGHWSERYFVLKDDRLLYYLKASDAVARGAYILDRTCVVSEVKPYTTSYDKRKTLHAFRIVWPEAVELMEGFEGGQAAEHENPAAPVSKEAGPRTSNRFVGPLSAMASLNSLSLSSTLAGARNAQSVEDTPSGEASMDPHVLSTSQSFSQTPHPPQSTTKIIRSANSFLESNKAGMTHRHGKRGATSVNEGAGYHRAGSSVANTNSTATLATGGAMVAMAVGGVVVGAMTAGLGLVAPMVVVGLTAATGSGAAVYGAAVSSSQTGLKIKQVALVLASESKESAKEWRSALEAQIRWSQSFPGADWLSMVGLDRRLPARIGKGGSFKHSRRQDGQRPSNKLDDVERWGRAACWRPWGVYNGLRVYEIDHVTTRSGVVKRPAGLRDGLEGQGNGGSTLFGGGRSRPSFPCRKLQLRVGATPLQTFIALVSVPCRVLNGVIERVRNVEHLDDQTDVIHLSLKPFFFWPTWTAPRDFCLLRSWRYDEDGTYVICYDSTIHPGCPPVDGFVRGSMHSVYTISPKRRSRRGIRSAESDEAPESLLTHILQVDPRGWIWHRLGYLDAFIVEMLCQGLDVRDLLEAERFMTVNVDTDEEGGTTGTAVRGETPELGAEAGGATSSSGGRGSGTLVTHRPTVPADMWGDIDASSFVVRGPNYAATRLKIPSAAVAFRLLAVDLFELPEAVQNIAGHPNNRVQAAMAAGDCPSFVFVVQLQIPGGEQQLGYVTYFAPTDMSVLEEDTPLARLLKPFFFGRDDGYRDLRFKLIPKIVEGNWVVRKSVGSTPAILGTKLKQTYHKGTNYFELDVNIASSSVAAGVVRLAAGYAKTLVVDLALVIQGEAEDELPERVLAGWRINHMDLASAKRLE
Sbjct:    1 MSAAPAAPASCDRSSLRSRGPGAARAGPPRATPSAAAPVVPVALKDPDALLEGWLKKRGVRIPGHWSERYFVLKDDRLLYYLKASDAVARGAYILDRTCVVSEVKPYTTSYDKRKTLHAFRIVWPEAVELMEGFEGGQAAEHENPAAPVSKEAGPRTSNRFVGPLSAMASLNSLSLSSTLAGARNAQSVEDTPSGEASMDPHVLSTSQSFSQTPHPPQSTTKIIRSANSFLESNKAGMTHRHGKRGATSVNEGAGYHRAGSSVANTNSTATLATGGAMVAMAVGGVVVGAMTAGLGLVAPMVVVGLTAATGSGAAVYGAAVSSSQTGLKIKQVALVLASESKESAKEWRSALEAQIRWSQSFPGADWLSMVGLDRRLPARIGKGGSFKHSRRQDGQRPSNKLDDVERWGRAACWRPWGVYNGLRVYEIDHVTTRSGVVKRPAGLRDGLEGQGNGGSTLFGGGRSRPSFPCRKLQLRVGATPLQTFIALVSVPCRVLNGVIERVRNVEHLDDQTDVIHLSLKPFFFWPTWTAPRDFCLLRSWRYDEDGTYVICYDSTIHPGCPPVDGFVRGSMHSVYTISPKRRSRRGIRSAESDEAPESLLTHILQVDPRGWIWHRLGYLDAFIVEMLCQGLDVRDLLEAERFMTVNVDTDEEGGTTGTAVRGETPELGAEAGGATSSSGGRGSGTLVTHRPTVPADMWGDIDASSFVVRGPNYAATRLKIPSAAVAFRLLAVDLFELPEAVQNIAGHPNNRVQAAMAAGDCPSFVFVVQLQIPGGEQQLGYVTYFAPTDMSVLEEDTPLARLLKPFFFGRDDGYRDLRFKLIPKIVEGNWVVRKSVGSTPAILGTKLKQTYHKGTNYFELDVNIASSSVAAGVVRLAAGYAKTLVVDLALVIQGEAEDELPERVLAGWRINHMDLASAKRLE 923          
BLAST of EWM27200.1 vs. NCBI_GenBank
Match: gi|298706457|emb|CBJ29444.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 338.191 bits (866), Expect = 2.591e-98
Identity = 231/640 (36.09%), Postives = 332/640 (51.88%), Query Frame = 0
Query:  263 VANTNSTATLATGGAMVAMAVGGVVVGAMTAGLGLVAPMVVVGLTAATGSGAAVYGAAVSSSQTGLKIKQVALVLASESKESAKEWRSALEAQIRWSQSFPGADWLSMVGLDRRLPARIGKG-GSFKHSRRQDGQRPSNKLDD---VERWGRAACWRPWGVYNGLRVYEIDHVTTRSGVVKRPAGLRDGLEGQGNGGSTLFGGGRSRPSF------PCRKLQLRVGATPLQTFIALVSVPCRVLNGVIERVRNVEHLDDQTDVIHLSLKPFFFWPTWTAPRDFCLLRSWRYDEDGTYVICYDSTIHPGCPPVDGFVRGSMHSVYTISPKRRSRRGIRSAESDEAPESLLTHILQVDPRGWIWHRLGYLDAFIVEMLCQGLDVRDLLEAERFMT--VNVDTDE-----EGGTTGTAVR------------GET-PELGAEAGGATSSSG-----GRGSGTLV--THRPTVPADMWGDIDASSFVVRGPNYAATRLKIPSAAVAFRLLAVDLFELPEAVQNIAGHPNNRVQAAMAAGDCPSFVFVVQLQIPGGEQQLGYVTYFAPTDMSVLEEDTPLARLLKPFFFGRDDGYRDLRFKLIPKIVEGNWVVRKSVGSTPAILGTKLKQTYHKGTNYFELDVNI 865
            V NT   A  AT     A+ V  +  G +T GL +   MV  G+T  +      Y ++   + +  +++     +AS   E+ ++WR A+  Q+   ++ P  D      ++R +  + G G G      R +G  P+ K  D   V+     + W   GV +GL V +      + G V   AGL  G + +    +       ++PS+      P  K Q  V A+PL+TF+AL+  P      V+     V+ LDD +DV+ + L+P +    W +PRDFCL R W   EDG Y++   S  H  CPP   FVRG  H VYTI+P+R S  G        +PE +L+  +QVDP+GW+W+RLG+ + +   +L   L+VRD++EAERFMT  +++  D      + G  G   R            G T PE   E GGA ++        RG  T +     PT+ A  W +   S+F+VRG +Y   R+K+ SA   FRL AVDLF LPE   ++A H  NRVQ A  AG+  SFV+V+Q+ +P G     +V YF P   + +++ TP  +L K  FFG  D +RD R KLIPKIVEGNWVV+++ GSTPAILGTKLKQ + KG NY E D+ I
Sbjct:  275 VLNTKGQAVAAT-----AVGVSWLTAGILTGGLVVAGTMVAAGVTVGSVGAYNKYKSSKKPNGSPGRVR-----VASFKAETVEQWRQAVLDQLENLRAQPRQD------VERSMWTKSGLGLGLPGWCVRPEGPPPALKAIDLRVVDSLLSNSVWVSRGVTHGLPVLQ-----QQVGAV---AGLESGSDSEECAQAV------AQPSWGLGGSGPVLKTQTIVRASPLETFVALMGPPRMSHTTVVSGTYTVQSLDDHSDVVRICLRPAWLKVAWASPRDFCLARYWHMAEDGCYIMALSSMEHHDCPPDPEFVRGEAHLVYTIAPRRDSVPG-----GHASPECMLSCHVQVDPKGWVWNRLGFRELYTTHILMTALEVRDVIEAERFMTPRISLRPDPAAGGFDNGQIGVGPRSPDGSPFLFEVLGPTGPESRQETGGAPATENVLDCSRRGGATSLETCPPPTLDARRWTEAVGSNFMVRGASYPTNRVKVASAKQMFRLRAVDLFVLPEPATHLAAHHGNRVQIARKAGET-SFVWVLQIMVP-GPPHYAFVCYFTPAADTWMDQSTPFGKLAKQVFFGDSDAFRDERLKLIPKIVEGNWVVKRAAGSTPAILGTKLKQHHFKGDNYLETDLEI 877          
BLAST of EWM27200.1 vs. NCBI_GenBank
Match: gi|570966534|gb|ETP29653.1| (hypothetical protein F442_21237 [Phytophthora parasitica P10297])

HSP 1 Score: 329.331 bits (843), Expect = 9.227e-98
Identity = 194/556 (34.89%), Postives = 296/556 (53.24%), Query Frame = 0
Query:  402 LDDVER-WGR-AACWRPWGVYNGLRVYEIDHVTTRSG--------VVKRPAGLRDGLEGQGNGGSTL----------------FGGGRSRPSFPCRKLQLRVGATPLQTFIALVSVPCR-VLNGVIERVRNVEHLDDQTDVIHLSLKPFFFWPTWTAPRDFCLLRSWRYDEDGTYVICYDSTIHPGCPPVDGFVRGSMHSV-YTISPKRRSRRGIRSAESDEAPESLLTHILQVDPRGW---IWHRLGYLDAFIVEMLCQGLDVRDLLEAERFMTVNVDTDEEGGTTGTAVRGETPELGAEAGGATSSSGGRGSGTLVTHRPTVPADMWGDIDASSFVVRGPNYAATRLKIPSAAVAFRLLAVDLFELPEAVQNIAGHPNNRVQAAM----AAGDCPSFVFVVQLQIPGGEQQLGYVTYFAPTDMSVLEEDTPLARLLKPFFFGRDDGYRDLRFKLIPKIVEGNWVVRKSVGSTPAILGTKLKQTYHKGTNYFELDVNIASSSVAAGVVRLAAGYAKTLVVDLALVIQGEAEDELPERVLAGWRINHMDLASAKRL 922
            L ++ER WG  AA WR   ++ GL++++     + +G        +    AGL   L G   GG  +                    R++ + PC K    V  +P + F+ L+ +    V +  +E    V  +DD +D+IH+  +P + WP W APRD CLLR WR  EDG+YVIC  S +HP CPP+ G VR +     + ISP           + DE   S++T+++ +DP+GW   +  RL  +  ++   +     +RD++EA +++  NV  +       +        +  E   A + +       L      VP  MW + D ++ +VRGP+Y   R KIPS +  FRL+ +DLFE  EAV++IA  P+N VQ  +      G    F FV+   +PG  + +  V Y+     SVL + +P + L+  F  G D+ +R+ RFKLIP IVEG+++VR++VGSTPA++G KL+Q Y KG  YFELDV+I SS+VA  VV L +GY K LV+D+  V++G+  +ELPER+    R+ H+DL  AK+L
Sbjct:   80 LSELERSWGMFAASWRVVDLFAGLQIWQEQPKNSENGPEPLNNVLLSTASAGLVTFLAGHIGGGGFVVSLLLTVLVVTAALWTLSNARAKTAVPCFKTLQVVDGSPSEIFMYLMGIKNYPVWDASVETAEVVHTIDDHSDIIHIVYRPVWMWPLWLAPRDLCLLRYWRRAEDGSYVICMQSALHPECPPMHGLVRATCKGGGFIISPS--------VTQGDEL-TSMVTNVVHLDPQGWEGQLLQRLNIMHLYVRPQVLALTGLRDVMEARKYVCPNVPEEFSAALAASTEEQANTAVQEETAAADTEAP---VSQLEEFPSNVPRSMWAEPDGAAMMVRGPDYLTDRRKIPSQSPFFRLVGMDLFESSEAVEHIASRPDNSVQRELRRHEEQGTEMPFTFVINFVVPGNPR-INLVLYYQVPHPSVLTDGSPSSELMADFLEGSDE-FRNERFKLIPCIVEGSFIVRQAVGSTPALIGKKLRQPYFKGKQYFELDVDIGSSAVANRVVGLVSGYTKKLVIDMGFVLEGQNSEELPERLFGTCRLVHIDLGVAKKL 621          
BLAST of EWM27200.1 vs. NCBI_GenBank
Match: gi|567946225|gb|ETK72036.1| (hypothetical protein L915_20799 [Phytophthora parasitica] >gi|567974890|gb|ETL25465.1| hypothetical protein L916_20681 [Phytophthora parasitica] >gi|568034265|gb|ETM31939.1| hypothetical protein L914_20558 [Phytophthora parasitica] >gi|570936205|gb|ETP01462.1| hypothetical protein F441_21288 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 327.02 bits (837), Expect = 5.703e-97
Identity = 200/566 (35.34%), Postives = 301/566 (53.18%), Query Frame = 0
Query:  402 LDDVER-WGR-AACWRPWGVYNGLRVYEIDHVTTRSG--------VVKRPAGLRDGLEGQGNGGSTL----------------FGGGRSRPSFPCRKLQLRVGATPLQTFIALVSVPCR-VLNGVIERVRNVEHLDDQTDVIHLSLKPFFFWPTWTAPRDFCLLRSWRYDEDGTYVICYDSTIHPGCPPVDGFVRGSMHSV-YTISPKRRSRRGIRSAESDEAPESLLTHILQVDPRGW---IWHRLGYLDAFIVEMLCQGLDVRDLLEAERFMTVNV----------DTDEEGGTTGTAVRGETPELGAEAGGATSSSGGRGSGTLVTHRPTVPADMWGDIDASSFVVRGPNYAATRLKIPSAAVAFRLLAVDLFELPEAVQNIAGHPNNRVQAAM----AAGDCPSFVFVVQLQIPGGEQQLGYVTYFAPTDMSVLEEDTPLARLLKPFFFGRDDGYRDLRFKLIPKIVEGNWVVRKSVGSTPAILGTKLKQTYHKGTNYFELDVNIASSSVAAGVVRLAAGYAKTLVVDLALVIQGEAEDELPERVLAGWRINHMDLASAKRL 922
            L ++ER W   AA WR   ++ GL++++     + +G        +    AGL   L G   GG  +                    R++ + PC K    V  +P + F+ L+ +    V +  +E    V  +DD +D+IH+  +P + WP W APRD CLLR WR  EDG+YVIC  S +HP CPP+ G VR +     + ISP           + DE   S++T+++ +DP+GW   +  RL  +  ++   +     +RD++EA +++  NV           T+E+  T   AV+ ET     EA  +           L      VP  MW + D ++ +VRGP+Y   R KIPS +  FRL+ +DLFE  EAV++IA  P+N VQ  +      G    F FV+   +PG  + +  V Y+     SVL + +P + L+  F  G D+ +R+ RFKLIP IVEG+++VR++VGSTPA++G KL+Q Y KG  YFELDV+I SS+VA  VV L +GY K LV+D+  V++G+  +ELPER+    R+ H+DL  AK+L
Sbjct:   80 LSELERSWAMFAASWRVVDLFAGLQIWQEQPKASENGPEPLNNVLLSTASAGLVTFLAGHIGGGGFVVSLLLTVLVVTAALWTLSNARAKTAVPCFKTLQVVDGSPSEIFMYLMGIKNYPVWDASVETAEVVHTIDDHSDIIHIVYRPVWMWPLWLAPRDLCLLRYWRRAEDGSYVICMQSALHPECPPMHGLVRATCKGGGFIISPS--------VTQGDEL-TSMVTNVVHLDPQGWEGQLLQRLNIMHLYVRPQVLALTGLRDVMEARKYVCPNVPEEFSAALAASTEEQANT---AVQEETAATDTEAPVSQ----------LEEFPSNVPRSMWAEPDGAAMMVRGPDYLTDRRKIPSQSPFFRLVGMDLFESSEAVEHIASRPDNSVQRELRRHEEQGTEMPFTFVINFVVPGNPR-INLVLYYQVPHPSVLTDGSPSSELMADFLEGSDE-FRNERFKLIPCIVEGSFIVRQAVGSTPALIGKKLRQPYFKGKQYFELDVDIGSSAVANRVVGLVSGYTKKLVIDMGFVLEGQNSEELPERLFGTCRLVHIDLGVAKKL 621          
BLAST of EWM27200.1 vs. NCBI_GenBank
Match: gi|953494565|emb|CEG44159.1| (START-like domain [Plasmopara halstedii])

HSP 1 Score: 327.02 bits (837), Expect = 7.148e-97
Identity = 197/566 (34.81%), Postives = 304/566 (53.71%), Query Frame = 0
Query:  402 LDDVER-WGR-AACWRPWGVYNGLRVYEIDHVTTRSG--------VVKRPAGLRDGLEGQGNGGSTL----------------FGGGRSRPSFPCRKLQLRVGATPLQTFIALVSVPCR-VLNGVIERVRNVEHLDDQTDVIHLSLKPFFFWPTWTAPRDFCLLRSWRYDEDGTYVICYDSTIHPGCPPVDGFVRGSMHSV-YTISPKRRSRRGIRSAESDEAPESLLTHILQVDPRGW---IWHRLGYLDAFIVEMLCQGLDVRDLLEAERFMTVNVDTDEEGGTTGTAVRGETPELGAEAGGATSSSGGRGSGT---------LVTHRPT-VPADMWGDIDASSFVVRGPNYAATRLKIPSAAVAFRLLAVDLFELPEAVQNIAGHPNNRVQAAM----AAGDCPSFVFVVQLQIPGGEQQLGYVTYFAPTDMSVLEEDTPLARLLKPFFFGRDDGYRDLRFKLIPKIVEGNWVVRKSVGSTPAILGTKLKQTYHKGTNYFELDVNIASSSVAAGVVRLAAGYAKTLVVDLALVIQGEAEDELPERVLAGWRINHMDLASAKRL 922
            L ++ER W   +A WR   ++ GL++++     T SG        +    AGL   L G   GG                       R++ + PC K    V  +P + F+ L+ +    + +  +E+   V  +DD +D+IH+  +P + WP W  PRD CLLR WR  EDG+YVIC  S +HP CPP+DG VR +     + ISP           + DE   S++T+++ +DP+GW   +  RL  +  ++   +     +RD++EA +++  NV  +        A+   T E   + G A S   G G GT         ++   P+ VP  MW + D ++ +VRGP+Y   R KIPS +  FRL+ +DLFE  E +++IA   +N +Q  +      G    F F+V   +PG   ++  V Y+     SVL + +P + L+  F  G D+ +R+ RFKLIP IVEG+++VR++VGSTP+++G KL+Q YH+G  YFELDV+I SS+VA  VV L +GY K LV+D+  V++G+  DELPER+    R+ H+DL+ AK+L
Sbjct:   80 LSELERSWAMFSANWRVVDLFAGLQIWQEQIGETGSGSEPLNNVLLSTASAGLVTFLAGHIGGGGFFVSLLLTLLVVTAALWTLSDARAKTAIPCFKTLQVVDGSPSEIFMYLMCINNYPIWDASVEKAEVVHTIDDHSDIIHIIYRPVWMWPVWLTPRDLCLLRYWRRAEDGSYVICMQSALHPECPPMDGLVRATCKGGGFIISPS--------VTQLDEM-TSMVTNVIHLDPQGWEGNLLQRLNMMHLYVRPQVLSVTGLRDVMEARKYVCPNVPEE-----FSAALASSTEE---QYGKAASQEEGAGGGTIGDPEAPVSMLEDFPSNVPRTMWAEPDGAAMMVRGPDYLTDRRKIPSQSPFFRLVGMDLFESSEVIEHIASRADNTIQRELRRHEERGTEMPFTFIVNFVVPG-TPRINLVLYYQVPHPSVLTDGSPSSELMADFLNGSDE-FRNERFKLIPCIVEGSFIVRQAVGSTPSLVGKKLRQPYHRGKQYFELDVDIGSSAVANRVVGLVSGYTKKLVIDMGFVLEGQNPDELPERLFGTCRLVHIDLSVAKKL 626          
BLAST of EWM27200.1 vs. NCBI_GenBank
Match: gi|675178807|ref|XP_008898288.1| (hypothetical protein PPTG_06151 [Phytophthora parasitica INRA-310] >gi|568101189|gb|ETN15875.1| hypothetical protein PPTG_06151 [Phytophthora parasitica INRA-310])

HSP 1 Score: 326.635 bits (836), Expect = 9.298e-97
Identity = 200/566 (35.34%), Postives = 301/566 (53.18%), Query Frame = 0
Query:  402 LDDVER-WGR-AACWRPWGVYNGLRVYEIDHVTTRSG--------VVKRPAGLRDGLEGQGNGGSTL----------------FGGGRSRPSFPCRKLQLRVGATPLQTFIALVSVPCR-VLNGVIERVRNVEHLDDQTDVIHLSLKPFFFWPTWTAPRDFCLLRSWRYDEDGTYVICYDSTIHPGCPPVDGFVRGSMHSV-YTISPKRRSRRGIRSAESDEAPESLLTHILQVDPRGW---IWHRLGYLDAFIVEMLCQGLDVRDLLEAERFMTVNV----------DTDEEGGTTGTAVRGETPELGAEAGGATSSSGGRGSGTLVTHRPTVPADMWGDIDASSFVVRGPNYAATRLKIPSAAVAFRLLAVDLFELPEAVQNIAGHPNNRVQAAM----AAGDCPSFVFVVQLQIPGGEQQLGYVTYFAPTDMSVLEEDTPLARLLKPFFFGRDDGYRDLRFKLIPKIVEGNWVVRKSVGSTPAILGTKLKQTYHKGTNYFELDVNIASSSVAAGVVRLAAGYAKTLVVDLALVIQGEAEDELPERVLAGWRINHMDLASAKRL 922
            L ++ER W   AA WR   ++ GL++++     + +G        +    AGL   L G   GG  +                    R++ + PC K    V  +P + F+ L+ +    V +  +E    V  +DD +D+IH+  +P + WP W APRD CLLR WR  EDG+YVIC  S +HP CPP+ G VR +     + ISP           + DE   S++T+++ +DP+GW   +  RL  +  ++   +     +RD++EA +++  NV           T+E+  T   AV+ ET     EA  +           L      VP  MW + D ++ +VRGP+Y   R KIPS +  FRL+ +DLFE  EAV++IA  P+N VQ  +      G    F FV+   +PG  + +  V Y+     SVL + +P + L+  F  G D+ +R+ RFKLIP IVEG+++VR++VGSTPA++G KL+Q Y KG  YFELDV+I SS+VA  VV L +GY K LV+D+  V++G+  +ELPER+    R+ H+DL  AK+L
Sbjct:   80 LSELERSWAMFAASWRVVDLFAGLQIWQEQPKDSENGPEPLNNVLLSTASAGLVTFLAGHIGGGGFVVSLLLTVLVVTAALWTLSNARAKTAVPCFKTLQVVDGSPSEIFMYLMGIKNYPVWDASVETAEVVHTIDDHSDIIHIVYRPVWMWPLWLAPRDLCLLRYWRRAEDGSYVICMQSALHPECPPMHGLVRATCKGGGFIISPS--------VTQGDEL-TSMVTNVVHLDPQGWEGQLLQRLNIMHLYVRPQVLALTGLRDVMEARKYVCPNVPEEFSAALAASTEEQANT---AVQEETAATDTEAPVSQ----------LEEFPSNVPRSMWAEPDGAAMMVRGPDYLTDRRKIPSQSPFFRLVGMDLFESSEAVEHIASRPDNSVQRELRRHEEQGTEMPFTFVINFVVPGNPR-INLVLYYQVPHPSVLTDGSPSSELMADFLEGSDE-FRNERFKLIPCIVEGSFIVRQAVGSTPALIGKKLRQPYFKGKQYFELDVDIGSSAVANRVVGLVSGYTKKLVIDMGFVLEGQNSEELPERLFGTCRLVHIDLGVAKKL 621          
BLAST of EWM27200.1 vs. NCBI_GenBank
Match: gi|568004353|gb|ETL78677.1| (hypothetical protein L917_20543 [Phytophthora parasitica])

HSP 1 Score: 326.635 bits (836), Expect = 9.298e-97
Identity = 200/566 (35.34%), Postives = 301/566 (53.18%), Query Frame = 0
Query:  402 LDDVER-WGR-AACWRPWGVYNGLRVYEIDHVTTRSG--------VVKRPAGLRDGLEGQGNGGSTL----------------FGGGRSRPSFPCRKLQLRVGATPLQTFIALVSVPCR-VLNGVIERVRNVEHLDDQTDVIHLSLKPFFFWPTWTAPRDFCLLRSWRYDEDGTYVICYDSTIHPGCPPVDGFVRGSMHSV-YTISPKRRSRRGIRSAESDEAPESLLTHILQVDPRGW---IWHRLGYLDAFIVEMLCQGLDVRDLLEAERFMTVNV----------DTDEEGGTTGTAVRGETPELGAEAGGATSSSGGRGSGTLVTHRPTVPADMWGDIDASSFVVRGPNYAATRLKIPSAAVAFRLLAVDLFELPEAVQNIAGHPNNRVQAAM----AAGDCPSFVFVVQLQIPGGEQQLGYVTYFAPTDMSVLEEDTPLARLLKPFFFGRDDGYRDLRFKLIPKIVEGNWVVRKSVGSTPAILGTKLKQTYHKGTNYFELDVNIASSSVAAGVVRLAAGYAKTLVVDLALVIQGEAEDELPERVLAGWRINHMDLASAKRL 922
            L ++ER W   AA WR   ++ GL++++     + +G        +    AGL   L G   GG  +                    R++ + PC K    V  +P + F+ L+ +    V +  +E    V  +DD +D+IH+  +P + WP W APRD CLLR WR  EDG+YVIC  S +HP CPP+ G VR +     + ISP           + DE   S++T+++ +DP+GW   +  RL  +  ++   +     +RD++EA +++  NV           T+E+  T   AV+ ET     EA  +           L      VP  MW + D ++ +VRGP+Y   R KIPS +  FRL+ +DLFE  EAV++IA  P+N VQ  +      G    F FV+   +PG  + +  V Y+     SVL + +P + L+  F  G D+ +R+ RFKLIP IVEG+++VR++VGSTPA++G KL+Q Y KG  YFELDV+I SS+VA  VV L +GY K LV+D+  V++G+  +ELPER+    R+ H+DL  AK+L
Sbjct:   80 LSELERSWAMFAASWRVVDLFAGLQIWQEQPKDSENGPEPLNNVLLSTASAGLVTFLAGHIGGGGFVVSLLLTVLVVTAALWTLSNARAKTAVPCFKTLQVVDGSPSEIFMYLMGIKNYPVWDASVETAEVVHTIDDHSDIIHIVYRPVWMWPLWLAPRDLCLLRYWRRAEDGSYVICMQSALHPECPPMHGLVRATCKGGGFIISPS--------VTQGDEL-TSMVTNVVHLDPQGWEGQLLQRLNIMHLYVRPQVLALTGLRDVMEARKYVCPNVPEEFSAALAASTEEQANT---AVQEETAATDTEAPVSQ----------LEEFPSNVPRSMWAEPDGAAMMVRGPDYLTDRRKIPSQSPFFRLVGMDLFESSEAVEHIASRPDNSVQRELRRHEEQGTEMPFTFVINFVVPGNPR-INLVLYYQVPHPSVLTDGSPSSELMADFLEGSDE-FRNERFKLIPCIVEGSFIVRQAVGSTPALIGKKLRQPYFKGKQYFELDVDIGSSAVANRVVGLVSGYTKKLVIDMGFVLEGQNSEELPERLFGTCRLVHIDLGVAKKL 621          
BLAST of EWM27200.1 vs. NCBI_GenBank
Match: gi|570312421|gb|ETO60369.1| (hypothetical protein F444_21418 [Phytophthora parasitica P1976])

HSP 1 Score: 326.25 bits (835), Expect = 1.098e-96
Identity = 200/566 (35.34%), Postives = 301/566 (53.18%), Query Frame = 0
Query:  402 LDDVER-WGR-AACWRPWGVYNGLRVYEIDHVTTRSG--------VVKRPAGLRDGLEGQGNGGSTL----------------FGGGRSRPSFPCRKLQLRVGATPLQTFIALVSVPCR-VLNGVIERVRNVEHLDDQTDVIHLSLKPFFFWPTWTAPRDFCLLRSWRYDEDGTYVICYDSTIHPGCPPVDGFVRGSMHSV-YTISPKRRSRRGIRSAESDEAPESLLTHILQVDPRGW---IWHRLGYLDAFIVEMLCQGLDVRDLLEAERFMTVNV----------DTDEEGGTTGTAVRGETPELGAEAGGATSSSGGRGSGTLVTHRPTVPADMWGDIDASSFVVRGPNYAATRLKIPSAAVAFRLLAVDLFELPEAVQNIAGHPNNRVQAAM----AAGDCPSFVFVVQLQIPGGEQQLGYVTYFAPTDMSVLEEDTPLARLLKPFFFGRDDGYRDLRFKLIPKIVEGNWVVRKSVGSTPAILGTKLKQTYHKGTNYFELDVNIASSSVAAGVVRLAAGYAKTLVVDLALVIQGEAEDELPERVLAGWRINHMDLASAKRL 922
            L ++ER W   AA WR   ++ GL++++     + +G        +    AGL   L G   GG  +                    R++ + PC K    V  +P + F+ L+ +    V +  +E    V  +DD +D+IH+  +P + WP W APRD CLLR WR  EDG+YVIC  S +HP CPP+ G VR +     + ISP           + DE   S++T+++ +DP+GW   +  RL  +  ++   +     +RD++EA +++  NV           T+E+  T   AV+ ET     EA  +           L      VP  MW + D ++ +VRGP+Y   R KIPS +  FRL+ +DLFE  EAV++IA  P+N VQ  +      G    F FV+   +PG  + +  V Y+     SVL + +P + L+  F  G D+ +R+ RFKLIP IVEG+++VR++VGSTPA++G KL+Q Y KG  YFELDV+I SS+VA  VV L +GY K LV+D+  V++G+  +ELPER+    R+ H+DL  AK+L
Sbjct:   80 LSELERSWAMFAASWRVVDLFAGLQIWQEQPKDSENGPEPLNNVLLSTASAGLVTFLAGHIGGGGFVVSLLLTVLVVTAALWTLSNARAKTAVPCFKTLQVVDGSPSEIFMYLMGIKNYPVWDASVETAEVVHTIDDHSDIIHIVYRPVWMWPLWLAPRDLCLLRYWRRAEDGSYVICMQSALHPECPPMHGLVRATCKGGGFIISPS--------VTQGDEL-TSMVTNVVHLDPQGWEGQLLQRLNIMHLYVRPQVLALTGLRDVMEARKYVCPNVPEEFSAALQASTEEQANT---AVQEETAATDTEAPVSQ----------LEEFPSNVPRSMWAEPDGAAMMVRGPDYLTDRRKIPSQSPFFRLVGMDLFESSEAVEHIASRPDNSVQRELRRHEEQGTEMPFTFVINFVVPGNPR-INLVLYYQVPHPSVLTDGSPSSELMADFLEGSDE-FRNERFKLIPCIVEGSFIVRQAVGSTPALIGKKLRQPYFKGKQYFELDVDIGSSAVANRVVGLVSGYTKKLVIDMGFVLEGQNSEELPERLFGTCRLVHIDLGVAKKL 621          
BLAST of EWM27200.1 vs. NCBI_GenBank
Match: gi|566008746|gb|ETI31657.1| (hypothetical protein F443_21399 [Phytophthora parasitica P1569])

HSP 1 Score: 326.25 bits (835), Expect = 1.110e-96
Identity = 200/566 (35.34%), Postives = 301/566 (53.18%), Query Frame = 0
Query:  402 LDDVER-WGR-AACWRPWGVYNGLRVYEIDHVTTRSG--------VVKRPAGLRDGLEGQGNGGSTL----------------FGGGRSRPSFPCRKLQLRVGATPLQTFIALVSVPCR-VLNGVIERVRNVEHLDDQTDVIHLSLKPFFFWPTWTAPRDFCLLRSWRYDEDGTYVICYDSTIHPGCPPVDGFVRGSMHSV-YTISPKRRSRRGIRSAESDEAPESLLTHILQVDPRGW---IWHRLGYLDAFIVEMLCQGLDVRDLLEAERFMTVNV----------DTDEEGGTTGTAVRGETPELGAEAGGATSSSGGRGSGTLVTHRPTVPADMWGDIDASSFVVRGPNYAATRLKIPSAAVAFRLLAVDLFELPEAVQNIAGHPNNRVQAAM----AAGDCPSFVFVVQLQIPGGEQQLGYVTYFAPTDMSVLEEDTPLARLLKPFFFGRDDGYRDLRFKLIPKIVEGNWVVRKSVGSTPAILGTKLKQTYHKGTNYFELDVNIASSSVAAGVVRLAAGYAKTLVVDLALVIQGEAEDELPERVLAGWRINHMDLASAKRL 922
            L ++ER W   AA WR   ++ GL++++     + +G        +    AGL   L G   GG  +                    R++ + PC K    V  +P + F+ L+ +    V +  +E    V  +DD +D+IH+  +P + WP W APRD CLLR WR  EDG+YVIC  S +HP CPP+ G VR +     + ISP           + DE   S++T+++ +DP+GW   +  RL  +  ++   +     +RD++EA +++  NV           T+E+  T   AV+ ET     EA  +           L      VP  MW + D ++ +VRGP+Y   R KIPS +  FRL+ +DLFE  EAV++IA  P+N VQ  +      G    F FV+   +PG  + +  V Y+     SVL + +P + L+  F  G D+ +R+ RFKLIP IVEG+++VR++VGSTPA++G KL+Q Y KG  YFELDV+I SS+VA  VV L +GY K LV+D+  V++G+  +ELPER+    R+ H+DL  AK+L
Sbjct:   80 LSELERSWAMFAASWRVVDLFAGLQIWQEQPKDSENGPEPLNNVLLSTASAGLVTFLAGHIGGGGFVVSLLLTVLVVTAALWTLSNARAKTAVPCFKTLQVVDGSPSEIFMYLMGIKNYPVWDASVETAEVVHTIDDHSDIIHIVYRPVWMWPLWLAPRDLCLLRYWRRAEDGSYVICMQSALHPECPPMHGLVRATCKGGGFIISPS--------VTQGDEL-TSMVTNVVHLDPQGWEGQLLQRLNIMHLYVRPQVLALTGLRDVMEARKYVCPNVPEEFSAALAASTEEQANT---AVQEETAATDTEAPVSQ----------LEEFPSNVPRSMWAEPDGAAMMVRGPDYLTDRRKIPSQSPFFRLVGMDLFESSEAVEHIASRPDNSVQRELRRHEEQGTEMPFTFVINFVVPGNPR-INLVLYYQVPHPSVLTDGSPSSELMADFLEGSDE-FRNERFKLIPCIVEGSFIVRQAVGSTPALIGKKLRQPYFKGKQYFELDVDIGSSAVANRVVGLVSGYTKKLVIDMGFVLEGQNSEELPERLFGTCRLVHIDLGVAKKL 621          
BLAST of EWM27200.1 vs. NCBI_GenBank
Match: gi|1210520538|dbj|GAX20531.1| (hypothetical protein FisN_3Hu620 [Fistulifera solaris])

HSP 1 Score: 329.331 bits (843), Expect = 1.929e-95
Identity = 237/688 (34.45%), Postives = 342/688 (49.71%), Query Frame = 0
Query:  292 TAGLGLVAPMVVVGLTAATGSGAAVYGAAVSSSQTGLKIKQVALVLASESKESAKEWRSALEAQIRWSQSFPGADWLSMVGLDRRLPARIGKGGSFKHSRRQDGQRPSNKLDDVERWGRAACWR--------PWGVYNGLRVYEIDHVTTRSGVVKRPAGLRDGLEGQGNGGSTLFGGGRSRPSFPCRKLQLRVGATPLQTFIALVSVPC-------RVLNGVIERV---RNVEHLDDQTDVIHLSLKPFFFWPTWTAPRDFCLLRSWRYDEDGTYVICYDSTIHPGCPPVDGFVRGSMHSVYTISPKRRSRRGIRSAESDEAPESLLTHILQVDPRGWI---------WHRLGYLDAFIVEMLCQGLDVRDLLEAERFMTVNVD------TDEEGGTTGTA-VRGETPELGAEAGGATSS-----------SGGRGSGTLVTHRPTVPADMWGDIDASSFVVRGPNYAATRLKIPSAAVAFRLLAVDLFELPEAVQN-IAGHPNNRVQAAMA----------AGDCPSFVFVVQLQIPGGEQQLGYVTYFAPTDMSVL--EEDTPLARLLKPFFFGRDDGYRDLRFKLIPKIVEGNWVVRKSVGSTPAILGTKLKQTYHKGTNYFELDVNIASSSVAAGVVRLAAGYAKTLVVDLALVIQGEAEDELPERVLAGWRINHMDLASAKR 921
            TAGLGLVA +V VG  AA G  AA     +  S TG K K++  ++AS   E A  WR  + A  + S     + W  +   D         G   +++  Q  + PS + D          WR         +   + LR+Y  + +       K  +  R  +   G   + +             K    +  + +  F+ L+SV C       ++L    E +   R VE +DD TD+IH+ L P F +P+WTAPRDFCL R WR +EDG+YV+CY+S  H  CPP D FVR  MH V+TI+P +R+    RS       E L+T  +QVDPRGW+         W    Y +AF V +L Q +++RD ++ +RF+    D      +       G A  R +  + G EA     +           S  + +G   T  P +  D W + D++SF VRG +Y     KI +     RL+AVDL  + + + +    HP  RVQ A+A            D P FVFVV + IPG     G V Y+A  DM ++  E+ TP ++L   FFFG  D +R+  FKL+P+IV+GN++VRK+VGSTPA+LG KL+Q Y +   +FE+ ++ AS+ VA GVVRLA GYAKTLVVD+  + +G  E  LPER+    R+ + D +   R
Sbjct:  200 TAGLGLVAGLVFVGAAAAGGGSAA---VGLGESVTGEKKKEI--MIASSEYEMANTWRKCIIAS-QESLCVQQSTWGQLFATD---------GRKARNALLQTAKPPSRR-DQAWSQQNQYAWRLLHGGWSSTFSGISALRIYREERIEVEQ---KFRSCFRSSISLDGKACAPI-------------KSHEVLSTSAVDAFLCLMSVGCVASFDHKQLLENQSEYLLTFRIVEAVDDNTDIIHMVLSPLFLFPSWTAPRDFCLYRYWRLEEDGSYVVCYESVEHSDCPPEDFFVRAEMHKVFTIAPHKRTSTSRRSVP--RPNECLVTAFVQVDPRGWVPTTPLPMLSWQ--SYAEAFGVAVLSQLVNIRDAIDTDRFVPCARDEPAAMLSFHPSSQHGIAQARSDDLDEGDEAHDDLQNYDFTFSTHEYPSASKFAGLASTPMP-LTRDSWAEPDSNSFRVRGKHYKDDGQKINAGPSIGRLIAVDLVSVDQPLYSGFCVHPRERVQLALAMEAEVKSKGHKSDMPPFVFVVNIVIPGPPYYHG-VFYYAIDDMRLINGEDGTPSSKLCNEFFFGTSDEFRNRTFKLVPQIVQGNFLVRKAVGSTPAVLGKKLRQLYVQSDRFFEVIIDCASNPVATGVVRLALGYAKTLVVDMGFLFEGNDESTLPERIFGSVRLKNPDFSPKMR 849          
The following BLAST results are available for this feature:
BLAST of EWM27200.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109380|gb|EWM27200.1|0.000e+0100.00protein of unknown function DUF1336 [Nannochlorops... [more]
gi|298706457|emb|CBJ29444.1|2.591e-9836.09conserved unknown protein [Ectocarpus siliculosus][more]
gi|570966534|gb|ETP29653.1|9.227e-9834.89hypothetical protein F442_21237 [Phytophthora para... [more]
gi|567946225|gb|ETK72036.1|5.703e-9735.34hypothetical protein L915_20799 [Phytophthora para... [more]
gi|953494565|emb|CEG44159.1|7.148e-9734.81START-like domain [Plasmopara halstedii][more]
gi|675178807|ref|XP_008898288.1|9.298e-9735.34hypothetical protein PPTG_06151 [Phytophthora para... [more]
gi|568004353|gb|ETL78677.1|9.298e-9735.34hypothetical protein L917_20543 [Phytophthora para... [more]
gi|570312421|gb|ETO60369.1|1.098e-9635.34hypothetical protein F444_21418 [Phytophthora para... [more]
gi|566008746|gb|ETI31657.1|1.110e-9635.34hypothetical protein F443_21399 [Phytophthora para... [more]
gi|1210520538|dbj|GAX20531.1|1.929e-9534.45hypothetical protein FisN_3Hu620 [Fistulifera sola... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3545rna3545Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications