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Properties
| Property Name | Value |
|---|
| Product | hsp90-like protein |
| Orig transcript id | gnl|cribi|Naga_100010g78.6165.mrna |
| Orig protein id | gnl|cribi|Naga_100010g78.6165 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:600056..601264 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3520 ID=rna3520|Name=rna3520|organism=Nannochloropsis gaditana|type=mRNA|length=1177bp
TGCGACAAGATGCTCTCAGCTAACAATATTCATGCTATCATGCGTGCTCG
GGTGAGCAGTAGGCAGGCATCTCACCCCCCCTGCTCGTTCCCTCTTACAT
TTTCTACCTGCAGCGAAGTGGAGGCTCTGTGAAGACGAATGGCGCTTGTT
AACTTGACAAACATCGTGGTGCTGGATAACCCGACCAGTTTTACAAATCC
CTTCACATTTGAAGTTACATTCGAGTGCGTGCAAGAGCTGGAGGATGATT
TGGAGTGGAAGGTACTGTACGTATCGTCGGCCGAAAATGCCGACCAGGAC
CAAGTCTTGGAAGAAGTGATGGTGGGACCCGTACCTGTAGGGGTGAACAA
GTTCGTGTTGCAGTCGGCAGCCCCGGACGTGTCCCAGATCCCCGAGGAGG
ACATCATTGGCGTCACCGTCATCCTCATCACCTGCACCTACCGCGAGCAG
GAGTTCGTGCGCGTAGGATACTATGTAAACAATGAGTACGCCGAGCCATT
TGACCCTGATCATCCACCCCGGCCCGTAGATCTTCTCAAGCTCGTGCGGA
ATATCTTGGCGGACAAGCCCCGCGTCACGCGGTTCCCAATCGATTGGGGC
ATGGGCATGGGCGTCGAGGGCGGTCAACAACAGCAGGTGACCGAGGAAGA
GGCAGCTGCAGAAGGTGTGGTAGATTTCGATGCTCTTGATCAGCAACAGG
ATGGCGAAGAGGAGGAGGGGGAGGAGGAGGAGGAGGAGGAGGAAGCAGAG
GACGATCGTGAGTTGGAGGGAGGAGAGGAAAGCGAGGAAGGGAGTGTGGT
GCAGGGGGATGATGCCATGGCAATGGAATTGTCATCACCTGTACCGAGAG
CACAAATGCGCGAAGGAACAGTATGACGAGGCCTCAATGAGCGGAGAGCT
CTCGTCTGCGGGGCGTCCGAGATGGGCGATGTGTCGAGTCGGAGGGACAG
GGTATGCGGATAGATGTACAGGCAAGTAATGCTCGACTCAGGGAGCCGGA
AGGAAGCAATGACATGAAAAAAAAAACAGGCGAGCATGGATGAAATCAAG
ACGCGGGCGACAGTGGGCGCAAAAGCAACGACAAGAAGTATGAGTCGAAA
GCGAAATCTTGTCCCCTGCCTGCCCGTCGGGCCGCCGACCTCTCTGTTTT
CCTTTCTTCCACCCGCTCGTCTCTCTA back to topprotein sequence of rna3520 >rna3520-protein ID=rna3520-protein|Name=rna3520|organism=Nannochloropsis gaditana|type=polypeptide|length=402bp
MSRCTNQNYHLSFLRRSIFASGNFPEAEILYDKAIKVKPDAVLYANRAAV
RLGLNLADSALADATKAIELDAEYSKAYYRKGQAHNVRKEFEAAFQAFER
GIELDPSNKTFRECASAAKEAAAKARAIQSLSADESSQKPGQSISDSTKS
KGPSNSMSPVSAPPPSKKAASKSAGERMVDGDGDQKDEKNSWSENMRGYK
ILEDGRKTTYFNNVLSEDAKRLIGDIAPKKIEAPVGTGNRGTEGTAGSAW
NYAGTFEERNMTDWAKGRLQELLGECRFPIPARHVGAGLEEGAVIEVKKV
TGLEGDAAVTFVRGKKKYLYDFVFTLEWEAGLAGGAKAKGTLRYPDVTPD
NDDEYDTLLEVDQLTPPEARSLIDEFVKSSRTGLQGVVREKLRLFMADFQ
AF back to topmRNA from alignment at CM002461.1:600056..601264- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3520 ID=rna3520|Name=rna3520|organism=Nannochloropsis gaditana|type=mRNA|length=1209bp|location=Sequence derived from alignment at CM002461.1:600056..601264- (Nannochloropsis gaditana)
ATGAGTCGATGCACAAATCAAAATTATCACTTGTCTTTTTTACGCAGGAG
TATTTTTGCTTCGGGAAATTTTCCTGAAGCTGAAATTTTGTACGACAAGG
CCATCAAAGTCAAGCCCGATGCGGTTCTATACGCCAACCGTGCCGCTGTT
CGCCTCGGGCTCAATCTTGCGGACTCTGCACTGGCAGACGCAACTAAGGC
TATCGAGCTGGACGCAGAGTACAGTAAAGCATACTACCGGAAAGGACAGG
CACACAATGTCCGAAAAGAGTTTGAGGCGGCCTTTCAGGCTTTTGAAAGA
GGTATTGAACTGGACCCAAGCAACAAAACCTTCAGAGAGTGCGCATCCGC
AGCCAAGGAGGCTGCTGCCAAGGCCAGGGCCATACAAAGTCTCTCCGCTG
ACGAGTCATCCCAAAAGCCCGGCCAGTCTATTTCTGATTCCACGAAAAGC
AAGGGGCCTTCAAATAGCATGTCTCCGGTCTCTGCCCCTCCGCCCTCCAA
AAAGGCAGCTAGCAAGTCCGCGGGAGAAAGGATGGTGGACGGGGACGGGG
ACCAGAAGGATGAGAAAAACTCATGGTCCGAGAACATGCGGGGCTACAAG
ATTCTGGAGGACGGGCGCAAGACCACGTACTTCAACAACGTGCTCTCCGA
GGATGCGAAGCGCCTGATAGGTGACATCGCGCCCAAAAAGATAGAGGCGC
CCGTTGGCACTGGGAATCGAGGAACGGAGGGGACAGCGGGCTCGGCATGG
AACTATGCTGGCACTTTCGAAGAGCGGAACATGACGGACTGGGCGAAGGG
TCGTCTACAGGAGCTGCTCGGAGAGTGCAGATTTCCTATCCCAGCCAGAC
ACGTCGGCGCAGGCCTCGAGGAAGGCGCTGTAATTGAAGTTAAGAAGGTA
ACGGGCTTGGAGGGGGATGCGGCCGTGACCTTTGTAAGAGGCAAGAAGAA
GTACCTATACGACTTTGTCTTCACGTTGGAGTGGGAGGCTGGACTTGCGG
GCGGTGCAAAGGCTAAGGGGACACTCAGGTATCCGGATGTAACTCCCGAC
AACGACGACGAGTACGACACCCTCTTGGAGGTGGATCAACTCACACCGCC
AGAGGCGCGCTCACTAATCGACGAATTTGTGAAGTCTTCAAGAACCGGGT
TGCAAGGAGTGGTGCGAGAGAAGCTGCGGCTCTTTATGGCTGACTTCCAG
GCCTTCTAG back to topCoding sequence (CDS) from alignment at CM002461.1:600056..601264- >rna3520 ID=rna3520|Name=rna3520|organism=Nannochloropsis gaditana|type=CDS|length=1209bp|location=Sequence derived from alignment at CM002461.1:600056..601264- (Nannochloropsis gaditana)
ATGAGTCGATGCACAAATCAAAATTATCACTTGTCTTTTTTACGCAGGAG
TATTTTTGCTTCGGGAAATTTTCCTGAAGCTGAAATTTTGTACGACAAGG
CCATCAAAGTCAAGCCCGATGCGGTTCTATACGCCAACCGTGCCGCTGTT
CGCCTCGGGCTCAATCTTGCGGACTCTGCACTGGCAGACGCAACTAAGGC
TATCGAGCTGGACGCAGAGTACAGTAAAGCATACTACCGGAAAGGACAGG
CACACAATGTCCGAAAAGAGTTTGAGGCGGCCTTTCAGGCTTTTGAAAGA
GGTATTGAACTGGACCCAAGCAACAAAACCTTCAGAGAGTGCGCATCCGC
AGCCAAGGAGGCTGCTGCCAAGGCCAGGGCCATACAAAGTCTCTCCGCTG
ACGAGTCATCCCAAAAGCCCGGCCAGTCTATTTCTGATTCCACGAAAAGC
AAGGGGCCTTCAAATAGCATGTCTCCGGTCTCTGCCCCTCCGCCCTCCAA
AAAGGCAGCTAGCAAGTCCGCGGGAGAAAGGATGGTGGACGGGGACGGGG
ACCAGAAGGATGAGAAAAACTCATGGTCCGAGAACATGCGGGGCTACAAG
ATTCTGGAGGACGGGCGCAAGACCACGTACTTCAACAACGTGCTCTCCGA
GGATGCGAAGCGCCTGATAGGTGACATCGCGCCCAAAAAGATAGAGGCGC
CCGTTGGCACTGGGAATCGAGGAACGGAGGGGACAGCGGGCTCGGCATGG
AACTATGCTGGCACTTTCGAAGAGCGGAACATGACGGACTGGGCGAAGGG
TCGTCTACAGGAGCTGCTCGGAGAGTGCAGATTTCCTATCCCAGCCAGAC
ACGTCGGCGCAGGCCTCGAGGAAGGCGCTGTAATTGAAGTTAAGAAGGTA
ACGGGCTTGGAGGGGGATGCGGCCGTGACCTTTGTAAGAGGCAAGAAGAA
GTACCTATACGACTTTGTCTTCACGTTGGAGTGGGAGGCTGGACTTGCGG
GCGGTGCAAAGGCTAAGGGGACACTCAGGTATCCGGATGTAACTCCCGAC
AACGACGACGAGTACGACACCCTCTTGGAGGTGGATCAACTCACACCGCC
AGAGGCGCGCTCACTAATCGACGAATTTGTGAAGTCTTCAAGAACCGGGT
TGCAAGGAGTGGTGCGAGAGAAGCTGCGGCTCTTTATGGCTGACTTCCAG
GCCTTCTAG back to top
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