EWM27216.1, cds3467 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27216.1 vs. NCBI_GenBank
Match: gi|585109396|gb|EWM27216.1| (dimethyladenosine transferase [Nannochloropsis gaditana]) HSP 1 Score: 936.791 bits (2420), Expect = 0.000e+0 Identity = 454/454 (100.00%), Postives = 454/454 (100.00%), Query Frame = 0 Query: 1 MMAAPSRLPRRVASLSWGATMSAILAAAATFWTQKAVGATYSAKWNNINRPRIMRECFLLPKCIARGDPRCSPPGLTVFTGLKRGHDYSNNYPCLTNETIVCEDKLKSSWSSVDGGNGSPSPTTASASGLAPPTDPTRPPTLPSQEFRPKQSLGQNFLSDQNYVLKIVQSLVDKSPGGRRVVELGPGPGALTRVLHRRYPDMLAVEIDPRAVALLNEALPSLNVVQSDVLQVDWTALAELRGGPLSVIGNLPYHITSQILFCLLDNHRTVRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDFLQPVHGQPIFDVEPGALKQVLNLSFQQRRKMLRQSLKGLLASRGLTLDEEWATKRPEELEPAQFVELTRLLFGSATEKHHKGSEDNIESEERHLKQEQTRVWRRARHGGFDETDEGDENDN 454 MMAAPSRLPRRVASLSWGATMSAILAAAATFWTQKAVGATYSAKWNNINRPRIMRECFLLPKCIARGDPRCSPPGLTVFTGLKRGHDYSNNYPCLTNETIVCEDKLKSSWSSVDGGNGSPSPTTASASGLAPPTDPTRPPTLPSQEFRPKQSLGQNFLSDQNYVLKIVQSLVDKSPGGRRVVELGPGPGALTRVLHRRYPDMLAVEIDPRAVALLNEALPSLNVVQSDVLQVDWTALAELRGGPLSVIGNLPYHITSQILFCLLDNHRTVRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDFLQPVHGQPIFDVEPGALKQVLNLSFQQRRKMLRQSLKGLLASRGLTLDEEWATKRPEELEPAQFVELTRLLFGSATEKHHKGSEDNIESEERHLKQEQTRVWRRARHGGFDETDEGDENDN Sbjct: 1 MMAAPSRLPRRVASLSWGATMSAILAAAATFWTQKAVGATYSAKWNNINRPRIMRECFLLPKCIARGDPRCSPPGLTVFTGLKRGHDYSNNYPCLTNETIVCEDKLKSSWSSVDGGNGSPSPTTASASGLAPPTDPTRPPTLPSQEFRPKQSLGQNFLSDQNYVLKIVQSLVDKSPGGRRVVELGPGPGALTRVLHRRYPDMLAVEIDPRAVALLNEALPSLNVVQSDVLQVDWTALAELRGGPLSVIGNLPYHITSQILFCLLDNHRTVRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDFLQPVHGQPIFDVEPGALKQVLNLSFQQRRKMLRQSLKGLLASRGLTLDEEWATKRPEELEPAQFVELTRLLFGSATEKHHKGSEDNIESEERHLKQEQTRVWRRARHGGFDETDEGDENDN 454
BLAST of EWM27216.1 vs. NCBI_GenBank
Match: gi|299116859|emb|CBN74971.1| (chloroplast dimethyladenosine synthase (Partial), partial [Ectocarpus siliculosus]) HSP 1 Score: 369.007 bits (946), Expect = 4.055e-121 Identity = 187/287 (65.16%), Postives = 223/287 (77.70%), Query Frame = 0 Query: 124 TASASGLAPPTDPTRPPTLPSQEFRPKQSLGQNFLSDQNYVLKIVQSLVDKSPGGRRVVELGPGPGALTRVLHRRYPDMLAVEIDPRAVALLNEALPSLNVVQSDVLQVDWTALAELRGGPLSVIGNLPYHITSQILFCLLDNHRTVRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDFLQPVHGQPIFDVEPGALKQVLNLSFQQRRKMLRQSLKGLLASRGLTLDEEWATKRPEELEPAQFVELTRLLFGSATE 410 A+ G + +PP+LP EFRPKQSLGQN+LSDQNYV+KI D S GGRRV+ELGPG GALT+VLH R+PDMLAV+ID RA+ LL +PSLN V SDVLQ+D+T LAELRGGPLSVIGNLPYHITSQILF L D++++VR+AVVTMQLEVAQRIVA + K YGILSV+FQLY RP++ F++PPTVFYPQP VTSAL++LDF G V LK VL+ +FQQRRKMLRQSLK LL + G L EE+AT+RPE+LEP +FVELTR +FG + E Sbjct: 111 AAAGRGKGSGSAKRKPPSLPQGEFRPKQSLGQNYLSDQNYVMKICNHFGDTSEGGRRVLELGPGTGALTQVLHERFPDMLAVDIDQRAIELLGSNMPSLNAVMSDVLQLDYTKLAELRGGPLSVIGNLPYHITSQILFTLCDHYQSVRRAVVTMQLEVAQRIVAKSSTKQYGILSVVFQLYARPQVLFQIPPTVFYPQPSVTSALISLDFTGKGPG-----VNQACLKSVLSSAFQQRRKMLRQSLKPLLRA-GQKLPEEFATRRPEQLEPQEFVELTRAVFGDSAE 391
BLAST of EWM27216.1 vs. NCBI_GenBank
Match: gi|873225691|emb|CEM23118.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 326.635 bits (836), Expect = 5.442e-106 Identity = 170/304 (55.92%), Postives = 215/304 (70.72%), Query Frame = 0 Query: 138 RPPTLPSQEFRPKQSLGQNFLSDQNYVLKIVQSLVDKSPGGRRVVELGPGPGALTRVLHRRYPDMLAVEIDPRAVALLNEALPSLNVVQSDVLQVDWTALAELRGGPLSVIGNLPYHITSQILFCLLDNHRTVRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDFLQPVHGQPIFDVEPGALKQVLNLSFQQRRKMLRQSLKGLLASRGLTLDEEWATKRPEELEPAQFVELTRLLFGSATEKHHKGSEDNIESEERHLKQEQTRVWRRARHG 441 RPPTLPS EFRPKQSLGQN+LSDQNYV KI +L+D S GG RV+ELGPG GALTR+LH RYP M AVE+D RA++LL+ +P L+++ DVLQV+W +LA +GG +SVIGNLPY+ITSQILFCL+D++ + QAVVT Q EVA+R+ A Y ILSV+FQLY PRI FK+PP VF+P PKV SALV L F P H +P V+P LK+V++ +F+QRRKMLRQSLKG+ G+ L +W RP+ + P QFVE+T++LFG A E + RVWR+ +HG Sbjct: 41 RPPTLPSGEFRPKQSLGQNYLSDQNYVRKICDALIDTSEGGSRVIELGPGAGALTRLLHERYPLMTAVELDERAISLLSRNIPDLDIIHDDVLQVNWMSLARAKGGRVSVIGNLPYYITSQILFCLVDSYPAIDQAVVTTQWEVAERLTARPGDSQYSILSVVFQLYCEPRIVFKIPPQVFFPVPKVDSALVHLRF--PQH-RPPLGVDPIHLKKVVHSAFRQRRKMLRQSLKGVAHEAGVALPPQWGVLRPQAMTPQQFVEVTKILFGPADEGPPR------------------RVWRKDQHG 323
BLAST of EWM27216.1 vs. NCBI_GenBank
Match: gi|676386229|ref|XP_009036393.1| (hypothetical protein AURANDRAFT_13505, partial [Aureococcus anophagefferens] >gi|323453421|gb|EGB09293.1| hypothetical protein AURANDRAFT_13505, partial [Aureococcus anophagefferens]) HSP 1 Score: 320.472 bits (820), Expect = 1.225e-104 Identity = 168/260 (64.62%), Postives = 202/260 (77.69%), Query Frame = 0 Query: 147 FRPKQSLGQNFLSDQNYVLKIVQSLVDKSPGGRRVVELGPGPGALTRVLHRRYPDMLAVEIDPRAVALLNEALPS-LNVVQSDVLQVDWTALAELRGGPLSVIGNLPYHITSQILFCLLDNHRTVRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDFLQPVHGQPIFDVEPGALKQVLNLSFQQRRKMLRQSLKGLLASRGLTLDEEWATKRPEELEPAQFVELTRLLF 405 FRPKQSLGQN+LSDQNY KIV SL D S GRRVVELGPG GALTR+L R+YP+M+AVEID RAV LL + P+ V+ SDVL VD+T LA RGG LSVIGNLPY+ITSQILFCL D+H +V +AVVTMQ EVA R+VA R KDYGILSV+FQLY +P+I FK+P T FYPQPKVTSALV +DF + G V+P L+ V+ +F+QRRKMLRQSLKG+L G TL +++ATKRPEEL PA+F++LT ++ Sbjct: 1 FRPKQSLGQNYLSDQNYATKIVDSLGDDSERGRRVVELGPGLGALTRLLLRQYPEMVAVEIDGRAVELLEQTYPAPFTVLHSDVLAVDYTKLAAARGGRLSVIGNLPYYITSQILFCLCDHHASVSRAVVTMQHEVALRLVAKPRTKDYGILSVVFQLYAQPKIAFKIPHTAFYPQPKVTSALVAIDFPE---GGVDLPVDPRKLRTVVTTAFRQRRKMLRQSLKGIL--NGATLPDQFATKRPEELAPAEFLDLTGAIY 255
BLAST of EWM27216.1 vs. NCBI_GenBank
Match: gi|58613497|gb|AAW79335.1| (chloroplast dimethyladenosine synthase [Heterocapsa triquetra]) HSP 1 Score: 293.508 bits (750), Expect = 4.925e-92 Identity = 145/276 (52.54%), Postives = 199/276 (72.10%), Query Frame = 0 Query: 134 TDPTRPPTLPSQEFRPKQSLGQNFLSDQNYVLKIVQSLVDKSPGGRRVVELGPGPGALTRVLHRRYPDMLAVEIDPRAVALLNEALPSLNVVQSDVLQVDWTALAELRGGPLSVIGNLPYHITSQILFCLLDNHRTVRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDFLQPVHGQPIFDVEPGALKQVLNLSFQQRRKMLRQSLKGLLASRGLTLD---EEWATKRPEELEPAQFVELTRLLFG 406 +D R PTLP+ F+PKQSL QNFL+D NYV K+V ++ D SPGG++V+ELGPG GALT LH R+P+M+AV++D RA+ +L + +P V++SDVL +++T LAE+RGGPL+++GNLPYH+TSQILF L D+ ++V+ A VTMQ EVA+RIVA K YGILSV FQLY P+I F +PP F+P+P V S+ V L+F + +V+P L+ V +F+ RRKML+ SLK LL ++ EE+A RPE++EP +FV LT+LLFG Sbjct: 97 SDKPRTPTLPATLFKPKQSLSQNFLADPNYVFKMVNAIEDDSPGGKQVLELGPGTGALTSRLHPRFPEMMAVDLDQRAMRVLAQNVPGCTVIRSDVLLINYTKLAEVRGGPLTIVGNLPYHVTSQILFTLADHAKSVKDAHVTMQKEVAERIVARPNTKKYGILSVCFQLYADPKILFDIPPNAFFPRPNVMSSYVKLNFADAEERRLALNVDPRNLRNVTTRAFRMRRKMLQNSLKNLLDCXXTLINELPEEYAKLRPEQIEPWEFVHLTQLLFG 372
BLAST of EWM27216.1 vs. NCBI_GenBank
Match: gi|551671430|ref|XP_005838472.1| (hypothetical protein GUITHDRAFT_65961 [Guillardia theta CCMP2712] >gi|428182632|gb|EKX51492.1| hypothetical protein GUITHDRAFT_65961 [Guillardia theta CCMP2712]) HSP 1 Score: 286.574 bits (732), Expect = 1.193e-90 Identity = 149/274 (54.38%), Postives = 190/274 (69.34%), Query Frame = 0 Query: 138 RPPTLPSQEFRPKQSLGQNFLSDQNYVLKIVQSLVDKSPGGRRVVELGPGPGALTRVLHRRYPDMLAVEIDPRAVALLNEALPSLNVVQSDVLQVDWTALAELR--GGPLSVIGNLPYHITSQILFCLLDNHRTVRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDFLQPVHGQPIFDVEPGALKQVLNLSFQQRRKMLRQSLKGLLASRGLTLDEEWATKRPEELEPAQFVELTRLLFGSAT 409 + P+ + ++ KQSLGQNFL D N +IV+SL DKS GR VVE+GPG GALT +L + YP M A+EID R+V L+ LP L+V+ S VL VDW L+ R G +SVIGNLPY+I SQILF +LD +R+AV+TMQ EVAQR+V+ RCK YGILSV+ QLY P+I FK+PP VF PQP V SALV +DF + +P F + L+ VL +FQ RRKMLRQSLK L+ RG+ L EE T+RPE L P +F++LT+L+FG T Sbjct: 16 KTPSQSASVYKAKQSLGQNFLVDMNVARRIVESLQDKSEDGRSVVEVGPGKGALTAMLLQHYPKMTAIEIDQRSVQYLSGQLPELSVIHSSVLDVDWKELSANRAAGDQISVIGNLPYYIVSQILFSILDAAPHIRRAVLTMQWEVAQRVVSEPRCKPYGILSVVSQLYGTPKIAFKIPPNVFQPQPDVDSALVVIDFPKE---RPSFGINECNLRTVLRSAFQMRRKMLRQSLKALVTERGIVLPEELGTRRPESLTPHEFIDLTKLIFGEGT 286
BLAST of EWM27216.1 vs. NCBI_GenBank
Match: gi|224004354|ref|XP_002295828.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|209585860|gb|ACI64545.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 278.1 bits (710), Expect = 8.406e-88 Identity = 152/274 (55.47%), Postives = 185/274 (67.52%), Query Frame = 0 Query: 140 PTLPSQEFRPKQSLGQNFLSDQNYVLKIVQSLVDKSPGGRRVVELGPGPGALTRVLHRRY--PDMLAVEIDPRAVALLNEALPSLNVVQSDVLQVDWTALAELRGGPLSVIGNLPYHITSQILFCLLD--NHRTVRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDFLQPVH-GQPIFDVEPGALKQVLNLSFQQRRKMLRQSLKGLLASRGLT--LDEEWATKRPEELEPAQFVELTRLLFG 406 PTLP EFRPKQSLGQN+L D N V KI ++ + R VELGPG GALT VL P++ +EID R+V LL+E P L + DVLQ D+ L+ GPLS+IGNLPY+ITSQILF L D + VR A VTMQ EV +RIVAPTRCKDYGILSV+FQLY +I+FK+PPTVFYPQPKV SAL+ L FL P + + V P L+ V+ +FQQRRK +R L+ L + L L + W++ RPEEL P QFVE+TRLLFG Sbjct: 2 PTLPGGEFRPKQSLGQNYLRDGNTVAKICRAFATQQKTQLRAVELGPGAGALTDVLVNSIGKPNLQCIEIDQRSVELLSEKHPELRIHHLDVLQADYPQLSIDEKGPLSIIGNLPYYITSQILFALADASHSNAVRSATVTMQYEVGRRIVAPTRCKDYGILSVVFQLYADCKIHFKIPPTVFYPQPKVDSALIGLHFLGPTALRRRLAGVSPSNLRAVVTATFQQRRKTVRNGLRNLALTFALNQELPKNWSSMRPEELTPGQFVEVTRLLFG 275
BLAST of EWM27216.1 vs. NCBI_GenBank
Match: gi|1072238081|gb|OEU22808.1| (rRNA adenine dimethylase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 268.47 bits (685), Expect = 4.649e-82 Identity = 157/321 (48.91%), Postives = 203/321 (63.24%), Query Frame = 0 Query: 137 TRPPTLPSQEFRPKQSLGQNFLSDQNYVLKIVQSL-VDKSPGGRR-------VVELGPGPGALTRVLHRRY-PDML-AVEIDPRAVALLNEALPSLNVVQSDVLQVDWTALAELRGGPLSVIGNLPYHITSQILFCLLD--NHRTVRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDFLQPVHGQP-IFDVEPGALKQVLNLSFQQRRKMLRQSLK---GLLASRGLTLDEEWATKRPEELEPAQFVELTRLLFGSATEKHHKGSEDNIESEERHLKQEQTRVWRRARHG 441 T P LPS + +PKQSLGQN+L D N V KI+++ D + G R +VELGPG GALT L +Y D+L +EID R++ LL E P L+V DVLQV + +AE G PL VIGNLPY+ITSQILF L D ++ V A VTMQ EVAQR+VAPT CKDYGILSV+FQ Y R +FK+PPTVFYP PKV SAL+ L FL P + + V P + V+ +F+QRRK +R +LK G + L ++W +KRPE+L P QFVE+TRLLFG K+ +N S + + + +VWR+ +HG Sbjct: 103 TATPQLPSGKLKPKQSLGQNYLRDGNTVAKIIKAFHKDATIHGDRQGKPLKSIVELGPGAGALTDRLVDKYGTDILQCIEIDIRSIELLAERYPDLSVHHEDVLQVSYPEMAEKEGQPLVVIGNLPYYITSQILFALADASHYGAVDCATVTMQWEVAQRMVAPTSCKDYGILSVVFQTYADVRCHFKIPPTVFYPAPKVDSALIGLHFLGPSKLRDRLAGVSPKDFRSVVTTAFRQRRKTIRNTLKKIPGDAFALEQQLPDDWFSKRPEQLTPGQFVEVTRLLFGDIGSKNTNEDGENESSNTKEVDLGR-KVWRKLKHG 422
BLAST of EWM27216.1 vs. NCBI_GenBank
Match: gi|219125196|ref|XP_002182872.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405666|gb|EEC45608.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 263.462 bits (672), Expect = 6.152e-82 Identity = 146/280 (52.14%), Postives = 180/280 (64.29%), Query Frame = 0 Query: 140 PTLPSQEFRPKQSLGQNFLSDQNYVLKIV----QSLVDKSPGGRRVVELGPGPGALTRVLHRRY--PDMLAVEIDPRAVALLNEALPSLNVVQSDVLQVDWTALAELRGGPLSVIGNLPYHITSQILFCLLDNHRT--VRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDFLQPVH-GQPIFDVEPGALKQVLNLSFQQRRKMLRQSLKGLLASRGLTLDEE----WATKRPEELEPAQFVELTRLLFG 406 P LP+ ++PKQSLGQN+L D N V KI+ Q P R++ELGPG GALT L Y +M A+E+D R+V +L E P L V +DV+QV + LAE G PL VIGNLPY+ITSQILF L D V A VTMQ EV QR+VA KDYGILSV+FQLY +FK+PPTVFYP+PKV SAL+ L FL P Q + V P L++V+ +FQQRRK +R SLK L ++ +E WA+KRPEEL P QF+E+TRLLFG Sbjct: 2 PKLPAGSYKPKQSLGQNYLKDPNTVAKILRTFHQDATKHRPSVERILELGPGAGALTDRLVETYGAANMQAIELDERSVQILREKHPGLRVQHADVMQVSYADLAEAEGQPLVVIGNLPYYITSQILFALADASHAGAVHSATVTMQWEVGQRMVAARSTKDYGILSVVFQLYADVTCHFKIPPTVFYPKPKVDSALIGLHFLGPARLRQRLAGVRPADLRRVVTSTFQQRRKTVRNSLKKLCQGDEFSIQQELPEDWASKRPEELSPGQFIEITRLLFG 281
BLAST of EWM27216.1 vs. NCBI_GenBank
Match: gi|1129200837|gb|OLQ03985.1| (Ribosomal RNA small subunit methyltransferase A [Symbiodinium microadriaticum]) HSP 1 Score: 282.337 bits (721), Expect = 1.065e-80 Identity = 148/318 (46.54%), Postives = 203/318 (63.84%), Query Frame = 0 Query: 138 RPPTLPSQEFRPKQSLGQNFLSDQNYVLKIVQSLVDKSPGGRRVVELGPGPGALTRVLHRRYPDMLAVEIDPRAVALLNEALPSLNVVQSDVLQVDWTALAELRGGPLSVIGNLPYHITSQILFCLLDNHRTVRQAVVTMQLEVAQRIVAPTRCKDYGILSVLFQLYTRPRINFKLPPTVFYPQPKVTSALVTLDFLQPVHGQPIFDVEPGALKQVLNLSFQQRRKMLRQSLKGLLASRGLTLD---EEWATKRPEELEPAQFVELTRLLFGSATEKHHKGSEDNIESEERHLKQEQTRVWRRARHGGFDETDEGDEN 452 +PPTLP+ F+PK+SL Q FL+D NY+ K+V L D+S GG+RV+ELGPG GA+T L +RYP+M+ VE+D RA+ +L + +P + VV+SDVL V++T LAELRGGPLS++ NLP+H+ SQ+LF L D+ VR A V +Q EVAQRIVA K YGI SV+FQLY P+I F LPP ++P+P V ++ + LDF + +V+P L+ N F RRKM+ SLK +L+ ++ EE+A RPE++EP +FV LT+L+FG K+E R +RRA G F TD G N Sbjct: 496 KPPTLPANLFKPKESLSQTFLADPNYIFKMVSELDDESEGGKRVIELGPGTGAVTSRLWQRYPEMVGVELDQRAMRVLAQKVPGVTVVRSDVLLVNYTRLAELRGGPLSIVSNLPFHVASQLLFTLADHADGVRSAHVILQQEVAQRIVAKPNTKKYGIPSVVFQLYADPKILFHLPPKAYFPRPNVMTSYLKLDFEAAAERRKALNVDPRDLRNFTNTVFNYRRKMMSNSLKRILSCHTTLINKLPEEYAKLRPEQIEPWEFVHLTQLIFG---------------------KKEFPRHFRRAWRGEFGRTDFGAFN 792 The following BLAST results are available for this feature:
BLAST of EWM27216.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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