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Properties
| Property Name | Value |
|---|
| Product | protein of unknown function DUF933 |
| Orig transcript id | gnl|cribi|Naga_100080g9.2854.mrna |
| Orig protein id | gnl|cribi|Naga_100080g9.2854 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002461.1 | supercontig | CM002461.1:294391..296129 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3391 ID=rna3391|Name=rna3391|organism=Nannochloropsis gaditana|type=mRNA|length=2005bp
GATATTTCCGGGGCTCACAGTCTCATGTTCAGTGCTAATTTTCTTCACAC
AAAAATGTGTCGGGCCGTGTTGGCTCTTCTCTGCTTTATATTGTGTGCTT
CTATGGCGTGCCCGTCCGATGCATCCATGGACAGCATGAACGCAGTGGCG
CTGCTTCACATTCGATTAAGACTCCTATCATGTCAATTTACGATAAACAG
GAGTGGCAACCATGGCGGGAAGCCGGAAAAAGGGGAAGCAATCCAGGGAC
GGATATTCCAAAAAGGACCAAGCACACAAATGGCTTCAGATGCTAGCTGA
AGCCCACTATCAACTACGACGGTCGGGCAACACCACAGCCACGACAGCTA
CCGCTGCAACGAGAAAGGAAAGTGCAGCCAATTGCAATGCAAATGGTGGC
TGGGCTCAAAGATTCCGGCTTCGGCATCAACATCACATGCACGCGGGGTA
CCGATGGAGTCAGTCTGGGTCGGGGGGGCCGCGGCTGAATCCTCTGGAGG
CCGCCCGCTTTATCGAGTCCTATTTAAGAGAACCGTCGACCGCTGCGTCC
GCTGCATGGGTGTATAAGGTCACGGGAAGGACGGGAAGGAGGGAGGGGGC
GGAGACAAGGAAGGCTACAGGGGGAACCAGGAGAGACCGGGGCTTGTGCG
AGTGGTGGCAGCGGGTAGGGGAAAGTTCGGAGAGCGGCAGCTTGTGCGCC
GACCGAAGAGTGGACGAGAAGCCTAATGGTGTAGTGACATTGACGGAGCT
TTGTTGTCGGCAAATCGGCGCGGACCTCGCGTTGTACGGGGCAGCTACCG
CGGCGGGCTCCGACCCGATGACGGCCCAAATGGCAGATTTAGCCATCCAC
TCTGAGGACAAGCAAAAAACTGAATCCTCCTTAGTCGCGAGCACGAGGAC
GGTATCTGACGGGAGTGCGGATGGACGCGTGGAAGAGAGGGGGAATGAGG
GGGAAGGGGAGGGAGAGGGGAGGTTGACGTATCGTGGGGGACTGGAAGGC
ATTTCGGAGACGTCAGTAGCAGCGTCAATACGGACTATGTTTAGCCTCCT
TCCCCCCATGTGCTTGGCCCATATCTCCCTCGCGGCCTCCCTCGCCCAGG
CGGTCACGGACGCGGCCCTGCCCTTGTTGTGCCAGCCGAGCGCCCTTTGT
CTGGCTTTGGTGGGCGACTACACCGACGAAGGCTTGATTAAAGCGCTGTC
CCCTCGTTTGGGGAACGCGTTCGCGCAATTTTCGTGGGAATGTGCCCGGG
TCGAACCTCGACTGGAGGGGTGTGTGGCGTTGGAGTCCTTGTACCTGAGA
AGCCCGTGCCTGACCCCGTCGTGTTTGGGGGAGGTGGGCGGGCGGCTCTC
CACGGTCAAGAGCCTCACCCTCTCTCGCTGCTTCAATGCTGACGTGACCA
TGACTGCCAAGGAGGTGCTCGCCCACATCGGCGCGTCCTGGCATTACCTG
GAGGAGCTTAGCTTGGAGGGCTGTCGTTGGCTTTCGGAAAAGGCCGTGCT
CAAGTGGGCAGGGGGGAAGGAAAAGGTCATGAACGCCCGGGGGCGGGAGG
GGGGCGAGGGAGGGAAAGAGTGGGTGGACGAGGAGGCGGCCGTATGGCAA
ATGGGGAAGCGGCTCGGGCGAGATATTCCTTCGGTGCTGGGATTGGAGGC
ATCGCTCTCTCCTTGTGCGCCCCCTGCGGCCTTGCGTCGGTTGCGCGTAG
ATGTGCGCCTTGCAAACAGAGCATTGGTCCGGCAAGCTTGGGAATCGCGG
GGCGTCGTGGTGGAGGAATGGTGAGAGGAGAAGCGAGCGGTGGGGCTGTC
TACAAGGTTTGCGATGGATGAGAGAAGCATGGTATACCCCAGGCAACGTA
TGCTGCCAGGACTGGCTCGCCAATGATTGAATTGTGAGCGGGGGAGGACT
TCGTCTAGGGCTTGGTCGTCGAAGGAGGTGTGGTGTTGGCTGTGGGCGTG
AGGAAAAAAGGGATCAAAGTAATGTAGTCATGTAGATAAGTAGCGACAGG
AGGAG back to topprotein sequence of rna3391 >rna3391-protein ID=rna3391-protein|Name=rna3391|organism=Nannochloropsis gaditana|type=polypeptide|length=402bp
MPPKAKEEKKAVVRFGRVRSNLKMGLVGLPNVGKSSLFNLLCNASAAASN
FAFCTIDPNESRCVVPDQRFDYLCDLHKPASKIPAYLHVTDIAGLIKGAS
EGAGLGNAFLSHIAAVDGIFHLVRGFENDEIMHVDDSVDPVRDLETITSE
LCMKDLDTIDRAIENEKKEHKRTKMTKEMEAYMALLEKIKAMLEANQPVR
TGTWTAAEVESVNERLKELITTKPMIYLVNLSMEQFVKKRSRCLPLVQKW
VDEHGGGTIIPFSVEFEQKRWDLREDPAALETFMADAEGAKSALPRMVKI
GYKQLHLIYFFTAGEQEVRCWTIQEGNLAPQAAGAIHTDFERGFIKAEVV
SYEDYKAYNNGKASMVDVKAAGKYRIEGKSYVVQDGDIIHFQFNVTADKK
KK back to topmRNA from alignment at CM002461.1:294391..296129- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3391 ID=rna3391|Name=rna3391|organism=Nannochloropsis gaditana|type=mRNA|length=1739bp|location=Sequence derived from alignment at CM002461.1:294391..296129- (Nannochloropsis gaditana)
GATTTTGCGTCTCCTATTAAGAATTTGATAATATGCCACCTAAGGCGAAG
GAAGAGAAGAAAGCAGTTGTGCGATTCGGTCGTGTCCGCAGCAACCTAAA
AATGGGATTGGTGGGATTGCCAAACGTGGGGAAGTCGAGCCTTTTTAATT
TATTGTGCAATGCCTCCGCGGCAGCCAGCAATTTCGCTTTCTGGTGCGTT
ATAACTATATCTGAACGATGCATTACCTCGTGGCTTAATTCTGGACCCTT
GCTTCAGACCTCACGCGGATTTCTCTGTCTCCTCCATCCCAACCTGTAGC
ACCATCGACCCCAACGAGTCACGTTGTGTCGTGCCTGACCAGCGCTTTGA
CTACTTGTGCGACTTGCACAAACCTGCTAGCAAGATCCCTGCCTACCTGC
ATGTGACAGACATTGCTGGGCTCATCAAAGGTGCCAGCGAGGGGGCGGGC
CTGGGGAACGCCTTCCTGAGCCACATCGCCGCTGTCGACGGGATCTTCCA
CCTGGTGCGGGGCTTCGAGAACGACGAGATCATGCATGTGGACGACTCAG
TCGACCCCGTCCGTGATTTGGAGACCATCACCAGCGAGCTGTGCATGAAG
GATTTGGACACGATCGACCGGGCCATCGAGAACGAGAAAAAGGAGCACAA
ACGCACCAAGGTGAGGTCAAGGTCCCGTGTCCCGTTCGTACAGGTTTCCT
TTTCGATAGAAGCTCAAAGCGCTGGTCATGTCTTCTGGAAGTTTCGACAA
AATTGAAAGGACCAACCATTCCCACCGTGGCATTCCTTCCATTGTCTTCG
TGAGGAGACGACCGACCAAGCCAACGCCATGTGTCTCACCCGCCCAACCC
CCTGCTTTCTTTTCGACGGCACAGATGACCAAGGAGATGGAGGCCTACAT
GGCGCTGTTGGAGAAAATCAAGGCCATGCTGGAGGCCAATCAGCCGGTCA
GGACCGGGACTTGGACGGCGGCGGAGGTAGAGAGTGTGAACGAGCGGTTG
AAAGAGCTCATCACCACCAAGCCGATGATCTATTTGGTCAACTTGAGCAT
GGAGCAGTTCGTCAAGAAGCGGAGCCGGTGTCTCCCCTTGGTCCAAAAGT
GGGTGGACGAGCACGGCGGGGGAACGATCATTCCCTTCTCGGTAGAGTTC
GAGCAGAAACGATGGGATTTGCGGGAAGACCCTGCGGCCTTGGAGACCTT
TATGGCGGACGCGGAGGGGGCCAAGAGCGCCCTGCCGCGGATGGTAAAAA
TCGGGTACAAGCAGCTCCATTTGATCTACTTCTTCACGGCCGGGGAGCAG
GAGGTCCGGTGCTGGACGATCCAAGAGGGCAATTTGGCGCCCCAAGCCGC
CGGGGCCATCCACACAGACTTTGAAAGGGGGTTCATTAAAGCGGAAGTGG
TGTCCTACGAGGACTACAAGGCTTACAACAACGGGAAAGCGAGCATGGTG
GACGTGAAGGCGGCCGGCAAGTATCGGATCGAAGGGAAGTCCTACGTGGT
GCAAGACGGGGATATCATCCATTTTCAATTCAACGTGACGGCGGACAAGA
AGAAGAAGTAAAAGGGGCCAGGCAGATCGTCGGTCTGGGGGCTGAAAGAG
GGGTGGAGGGGTCAGAGAGCAAGGGGGGAGGTCCCAGTAGTAGGGAGTGG
AGAGCGGGATGAAGTTCGTGGAAGGGGGGGGACTGCGCAACGAGGAGACG
GAACGAAAATGAAAAGAAATGGACCAGGAATGCGGGAGC back to topCoding sequence (CDS) from alignment at CM002461.1:294391..296129- >rna3391 ID=rna3391|Name=rna3391|organism=Nannochloropsis gaditana|type=CDS|length=3627bp|location=Sequence derived from alignment at CM002461.1:294391..296129- (Nannochloropsis gaditana)
ATGACCAAGGAGATGGAGGCCTACATGGCGCTGTTGGAGAAAATCAAGGC
CATGCTGGAGGCCAATCAGCCGGTCAGGACCGGGACTTGGACGGCGGCGG
AGGTAGAGAGTGTGAACGAGCGGTTGAAAGAGCTCATCACCACCAAGCCG
ATGATCTATTTGGTCAACTTGAGCATGGAGCAGTTCGTCAAGAAGCGGAG
CCGGTGTCTCCCCTTGGTCCAAAAGTGGGTGGACGAGCACGGCGGGGGAA
CGATCATTCCCTTCTCGGTAGAGTTCGAGCAGAAACGATGGGATTTGCGG
GAAGACCCTGCGGCCTTGGAGACCTTTATGGCGGACGCGGAGGGGGCCAA
GAGCGCCCTGCCGCGGATGGTAAAAATCGGGTACAAGCAGCTCCATTTGA
TCTACTTCTTCACGGCCGGGGAGCAGGAGGTCCGGTGCTGGACGATCCAA
GAGGGCAATTTGGCGCCCCAAGCCGCCGGGGCCATCCACACAGACTTTGA
AAGGGGGTTCATTAAAGCGGAAGTGGTGTCCTACGAGGACTACAAGGCTT
ACAACAACGGGAAAGCGAGCATGGTGGACGTGAAGGCGGCCGGCAAGTAT
CGGATCGAAGGGAAGTCCTACGTGGTGCAAGACGGGGATATCATCCATTT
TCAATTCAACGTGACGGCGGACAAGAAGAAGAAGTAACACCATCGACCCC
AACGAGTCACGTTGTGTCGTGCCTGACCAGCGCTTTGACTACTTGTGCGA
CTTGCACAAACCTGCTAGCAAGATCCCTGCCTACCTGCATGTGACAGACA
TTGCTGGGCTCATCAAAGGTGCCAGCGAGGGGGCGGGCCTGGGGAACGCC
TTCCTGAGCCACATCGCCGCTGTCGACGGGATCTTCCACCTGGTGCGGGG
CTTCGAGAACGACGAGATCATGCATGTGGACGACTCAGTCGACCCCGTCC
GTGATTTGGAGACCATCACCAGCGAGCTGTGCATGAAGGATTTGGACACG
ATCGACCGGGCCATCGAGAACGAGAAAAAGGAGCACAAACGCACCAAGAT
GCCACCTAAGGCGAAGGAAGAGAAGAAAGCAGTTGTGCGATTCGGTCGTG
TCCGCAGCAACCTAAAAATGGGATTGGTGGGATTGCCAAACGTGGGGAAG
TCGAGCCTTTTTAATTTATTGTGCAATGCCTCCGCGGCAGCCAGCAATTT
CGCTTTCTGATGACCAAGGAGATGGAGGCCTACATGGCGCTGTTGGAGAA
AATCAAGGCCATGCTGGAGGCCAATCAGCCGGTCAGGACCGGGACTTGGA
CGGCGGCGGAGGTAGAGAGTGTGAACGAGCGGTTGAAAGAGCTCATCACC
ACCAAGCCGATGATCTATTTGGTCAACTTGAGCATGGAGCAGTTCGTCAA
GAAGCGGAGCCGGTGTCTCCCCTTGGTCCAAAAGTGGGTGGACGAGCACG
GCGGGGGAACGATCATTCCCTTCTCGGTAGAGTTCGAGCAGAAACGATGG
GATTTGCGGGAAGACCCTGCGGCCTTGGAGACCTTTATGGCGGACGCGGA
GGGGGCCAAGAGCGCCCTGCCGCGGATGGTAAAAATCGGGTACAAGCAGC
TCCATTTGATCTACTTCTTCACGGCCGGGGAGCAGGAGGTCCGGTGCTGG
ACGATCCAAGAGGGCAATTTGGCGCCCCAAGCCGCCGGGGCCATCCACAC
AGACTTTGAAAGGGGGTTCATTAAAGCGGAAGTGGTGTCCTACGAGGACT
ACAAGGCTTACAACAACGGGAAAGCGAGCATGGTGGACGTGAAGGCGGCC
GGCAAGTATCGGATCGAAGGGAAGTCCTACGTGGTGCAAGACGGGGATAT
CATCCATTTTCAATTCAACGTGACGGCGGACAAGAAGAAGAAGTAACACC
ATCGACCCCAACGAGTCACGTTGTGTCGTGCCTGACCAGCGCTTTGACTA
CTTGTGCGACTTGCACAAACCTGCTAGCAAGATCCCTGCCTACCTGCATG
TGACAGACATTGCTGGGCTCATCAAAGGTGCCAGCGAGGGGGCGGGCCTG
GGGAACGCCTTCCTGAGCCACATCGCCGCTGTCGACGGGATCTTCCACCT
GGTGCGGGGCTTCGAGAACGACGAGATCATGCATGTGGACGACTCAGTCG
ACCCCGTCCGTGATTTGGAGACCATCACCAGCGAGCTGTGCATGAAGGAT
TTGGACACGATCGACCGGGCCATCGAGAACGAGAAAAAGGAGCACAAACG
CACCAAGATGCCACCTAAGGCGAAGGAAGAGAAGAAAGCAGTTGTGCGAT
TCGGTCGTGTCCGCAGCAACCTAAAAATGGGATTGGTGGGATTGCCAAAC
GTGGGGAAGTCGAGCCTTTTTAATTTATTGTGCAATGCCTCCGCGGCAGC
CAGCAATTTCGCTTTCTGATGACCAAGGAGATGGAGGCCTACATGGCGCT
GTTGGAGAAAATCAAGGCCATGCTGGAGGCCAATCAGCCGGTCAGGACCG
GGACTTGGACGGCGGCGGAGGTAGAGAGTGTGAACGAGCGGTTGAAAGAG
CTCATCACCACCAAGCCGATGATCTATTTGGTCAACTTGAGCATGGAGCA
GTTCGTCAAGAAGCGGAGCCGGTGTCTCCCCTTGGTCCAAAAGTGGGTGG
ACGAGCACGGCGGGGGAACGATCATTCCCTTCTCGGTAGAGTTCGAGCAG
AAACGATGGGATTTGCGGGAAGACCCTGCGGCCTTGGAGACCTTTATGGC
GGACGCGGAGGGGGCCAAGAGCGCCCTGCCGCGGATGGTAAAAATCGGGT
ACAAGCAGCTCCATTTGATCTACTTCTTCACGGCCGGGGAGCAGGAGGTC
CGGTGCTGGACGATCCAAGAGGGCAATTTGGCGCCCCAAGCCGCCGGGGC
CATCCACACAGACTTTGAAAGGGGGTTCATTAAAGCGGAAGTGGTGTCCT
ACGAGGACTACAAGGCTTACAACAACGGGAAAGCGAGCATGGTGGACGTG
AAGGCGGCCGGCAAGTATCGGATCGAAGGGAAGTCCTACGTGGTGCAAGA
CGGGGATATCATCCATTTTCAATTCAACGTGACGGCGGACAAGAAGAAGA
AGTAACACCATCGACCCCAACGAGTCACGTTGTGTCGTGCCTGACCAGCG
CTTTGACTACTTGTGCGACTTGCACAAACCTGCTAGCAAGATCCCTGCCT
ACCTGCATGTGACAGACATTGCTGGGCTCATCAAAGGTGCCAGCGAGGGG
GCGGGCCTGGGGAACGCCTTCCTGAGCCACATCGCCGCTGTCGACGGGAT
CTTCCACCTGGTGCGGGGCTTCGAGAACGACGAGATCATGCATGTGGACG
ACTCAGTCGACCCCGTCCGTGATTTGGAGACCATCACCAGCGAGCTGTGC
ATGAAGGATTTGGACACGATCGACCGGGCCATCGAGAACGAGAAAAAGGA
GCACAAACGCACCAAGATGCCACCTAAGGCGAAGGAAGAGAAGAAAGCAG
TTGTGCGATTCGGTCGTGTCCGCAGCAACCTAAAAATGGGATTGGTGGGA
TTGCCAAACGTGGGGAAGTCGAGCCTTTTTAATTTATTGTGCAATGCCTC
CGCGGCAGCCAGCAATTTCGCTTTCTG back to top
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