EWM27422.1, cds3255 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27422.1 vs. NCBI_GenBank
Match: gi|585109657|gb|EWM27422.1| (glutathione s-transferase mu 1 [Nannochloropsis gaditana]) HSP 1 Score: 637.876 bits (1644), Expect = 0.000e+0 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
Query: 1 MPLSHNQTGTVDQDKAMSKTENNHTVLFAVAATAATAGALAGPLSSMVHRAYKRHRHRKHTHFTLGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWCQMGREGKRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTGGLWLVGGRMTVADFVLYDLLSQARTLYPPALSSHRELQDFTYRFEALPSIAQYLGSEACQLLPLFMVKVV 307
MPLSHNQTGTVDQDKAMSKTENNHTVLFAVAATAATAGALAGPLSSMVHRAYKRHRHRKHTHFTLGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWCQMGREGKRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTGGLWLVGGRMTVADFVLYDLLSQARTLYPPALSSHRELQDFTYRFEALPSIAQYLGSEACQLLPLFMVKVV
Sbjct: 1 MPLSHNQTGTVDQDKAMSKTENNHTVLFAVAATAATAGALAGPLSSMVHRAYKRHRHRKHTHFTLGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWCQMGREGKRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTGGLWLVGGRMTVADFVLYDLLSQARTLYPPALSSHRELQDFTYRFEALPSIAQYLGSEACQLLPLFMVKVV 307
BLAST of EWM27422.1 vs. NCBI_GenBank
Match: gi|553185828|ref|XP_005854315.1| (glutathione S-transferase [Nannochloropsis gaditana CCMP526] >gi|422294739|gb|EKU22039.1| glutathione S-transferase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 459.914 bits (1182), Expect = 7.970e-162 Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0
Query: 17 MSKTENNHTVLFAVAATAATAGALAGPLSSMVHRAYKRHRHRKHTHFTLGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWCQMGREGKRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTG 237
MSK ENNHTVLFAVAATAATAGALAGPLSSMVHRAYKRHRHRKHTHFTLGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWCQMGREGKRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTG
Sbjct: 1 MSKNENNHTVLFAVAATAATAGALAGPLSSMVHRAYKRHRHRKHTHFTLGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWCQMGREGKRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTG 221
BLAST of EWM27422.1 vs. NCBI_GenBank
Match: gi|998735188|ref|XP_015505857.1| (PREDICTED: glutathione S-transferase Mu 1 isoform X1 [Parus major]) HSP 1 Score: 123.635 bits (309), Expect = 2.031e-30 Identity = 67/238 (28.15%), Postives = 115/238 (48.32%), Query Frame = 0
Query: 64 TLGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWCQMGREGKRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTGGLWLVGGRMTVADFVLYDLLSQARTLYPPALSSHRELQDFTYRFEALPSIAQYLGSEACQLLPL 301
TLG W R A+R LL Y E P++D+ + G PDY + W++ K++ D +P+ G T + + I+RY+ R++ + G +E+ VD+L +++ DF ++L + +NP + + K + L +L F ++L + K W VG ++T DF+++D+L Q R P L + L+DF RF AL +A Y+ S Q +P+
Sbjct: 4 TLGYWDIRGLAHAIRLLLEYTETPYEDKLYSCGEAPDYDKSQWINEKEKLGLDFPNLPYFIDGPTK--------------------LTQSNAILRYIARKHNMCGETEEEILRVDMLENQIMDFRMSLVMVCYNPDFEKLKPGYLE-QLPGKLKLFSNFLGDRK------------WFVGEKLTFVDFLMFDVLDQNRIFEPKCLEPFKNLKDFVERFGALEKVAAYMKSSRFQKMPI 208
BLAST of EWM27422.1 vs. NCBI_GenBank
Match: gi|543374134|ref|XP_005530282.1| (PREDICTED: glutathione S-transferase Mu 1-like [Pseudopodoces humilis]) HSP 1 Score: 123.635 bits (309), Expect = 2.154e-30 Identity = 66/238 (27.73%), Postives = 114/238 (47.90%), Query Frame = 0
Query: 64 TLGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWCQMGREGKRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTGGLWLVGGRMTVADFVLYDLLSQARTLYPPALSSHRELQDFTYRFEALPSIAQYLGSEACQLLPL 301
LG W R A+R LL Y E P++D+ + G PDY + W++ K++ D +P+ G T + + I+RY+ R++ + G +E+ VD+L +++ DF ++L + +NP + + K + L +L F ++L + K W VG ++T DF+++D+L Q R P L + L+DF RF AL +A Y+ S Q +P+
Sbjct: 3 VLGYWDIRGLAHAIRLLLEYTETPYEDKLYSCGEAPDYDKSQWINEKEKLGLDFPNLPYFIDGSTK--------------------LTQSNAILRYIARKHNMCGETEEEILRVDMLENQIMDFRMSLVMICYNPDFEKLKPGYLEQ-LPGKLKLFSNFLGDRK------------WFVGEKLTFVDFLMFDVLDQNRIFEPKCLEPFKNLKDFVERFGALEKVAAYMKSSCFQKMPI 207
BLAST of EWM27422.1 vs. NCBI_GenBank
Match: gi|1208030011|gb|OWK56468.1| (Glutathione S-transferase Mu 5 [Lonchura striata domestica]) HSP 1 Score: 122.479 bits (306), Expect = 5.845e-30 Identity = 67/238 (28.15%), Postives = 114/238 (47.90%), Query Frame = 0
Query: 64 TLGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWCQMGREGKRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTGGLWLVGGRMTVADFVLYDLLSQARTLYPPALSSHRELQDFTYRFEALPSIAQYLGSEACQLLPL 301
TLG W R A+R LL Y E P++D+ + G PDY + W++ K++ D +P+ G T + + I+RY+ R++ + G +E+ VD+L +++ DF ++L + +NP + + K + L +L F ++L + K W G ++T DF+++D+L Q R P L + L+DF RF AL +A YL S Q +P+
Sbjct: 4 TLGYWDIRGLAHAIRLLLEYTETPYEDKLYSCGEAPDYDKSQWINEKEKLGLDFPNLPYFIDGPTK--------------------LTQSNAILRYIARKHNMCGETEEEILRVDMLENQIMDFRMSLVMVCYNPDFEKLKPGYLEQ-LPGKLKLFSNFLGDRK------------WFAGEKLTFVDFLMFDVLDQNRIFEPKCLEPFKNLKDFVERFGALEKVAAYLKSSRFQKMPI 208
BLAST of EWM27422.1 vs. NCBI_GenBank
Match: gi|927162789|ref|XP_013920028.1| (PREDICTED: glutathione S-transferase Mu 1-like [Thamnophis sirtalis]) HSP 1 Score: 120.939 bits (302), Expect = 1.871e-29 Identity = 70/237 (29.54%), Postives = 114/237 (48.10%), Query Frame = 0
Query: 65 LGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWCQMGREGKRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTGGLWLVGGRMTVADFVLYDLLSQARTLYPPALSSHRELQDFTYRFEALPSIAQYLGSEACQLLPL 301
LG W R ++R LL Y P++D+ + G PDY + W++ K++ D +P YL+ +GK K + + I+RY+ R++ L G+ +E+ VD+L +++ DF + L + +NP + + K + L +L F +L + K W G ++T DF++YD+L Q R P L + LQDF RFEAL IA Y+ S P+
Sbjct: 3 LGYWDIRGLAHSIRLLLEYTGTPYEDKLYSCGEAPDYDKSQWINEKEKLGLDFPNLP--------YLI-----------DGKTK-LTQSNAIIRYIARKHDLCGKTEEELNRVDMLENQVMDFRMGLAMICYNPDFEKLKPGYLE-QLPGKLKLFSQFLGDRK------------WFAGDKITFVDFLMYDVLDQNRMFEPKCLDQFKNLQDFLTRFEALEKIAAYMSSSRFMKTPI 206
BLAST of EWM27422.1 vs. NCBI_GenBank
Match: gi|1096017969|ref|XP_018777730.1| (PREDICTED: glutathione S-transferase Mu 3-like isoform X1 [Serinus canaria]) HSP 1 Score: 120.939 bits (302), Expect = 1.928e-29 Identity = 67/238 (28.15%), Postives = 113/238 (47.48%), Query Frame = 0
Query: 64 TLGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWCQMGREGKRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTGGLWLVGGRMTVADFVLYDLLSQARTLYPPALSSHRELQDFTYRFEALPSIAQYLGSEACQLLPL 301
TLG W R A+R LL Y E P++D+ + G PDY + W++ K++ D +P+ G T + + I+RY+ R++ + G +E VD+L +++ DF ++L + +NP + + K + L +L F ++L + K W G ++T DF+++D+L Q R P L + L+DF RF AL +A YL S Q +P+
Sbjct: 4 TLGYWDIRGLAHAIRLLLEYTETPYEDKLYSCGEAPDYDKSQWINEKEKLGLDFPNLPYFIDGPTK--------------------LTQSNAILRYIARKHNMCGETEEETLRVDMLENQIMDFRMSLVMVCYNPDFEKLKPGYLE-QLPGKLKLFSNFLGDRK------------WFAGEKLTFVDFLMFDVLDQNRIFEPKCLEPFKNLKDFMERFGALEKVAAYLKSSRFQKMPI 208
BLAST of EWM27422.1 vs. NCBI_GenBank
Match: gi|729771503|ref|XP_010583076.1| (PREDICTED: glutathione S-transferase Mu 1-like [Haliaeetus leucocephalus]) HSP 1 Score: 119.398 bits (298), Expect = 7.929e-29 Identity = 66/238 (27.73%), Postives = 113/238 (47.48%), Query Frame = 0
Query: 64 TLGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWCQMGREGKRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTGGLWLVGGRMTVADFVLYDLLSQARTLYPPALSSHRELQDFTYRFEALPSIAQYLGSEACQLLPL 301
TLG W R A+R LL Y E P++D+ + G PDY + W++ K++ D +P+ G T + + IMRY+ R++ + G +E+ VD+L +++ DF ++L + +NP + + K + L +L F ++L + K W G ++T DF+++D+L Q R P L + L+DF RF AL +A Y+ S +P+
Sbjct: 4 TLGYWDIRGLAHAIRLLLEYTETPYEDKLYSCGEAPDYDKSQWINEKEKLGLDFPNLPYFIDGTTK--------------------LTQSNAIMRYIARKHKMCGETEEEILRVDMLENQIMDFRMSLVMVCYNPDFEKLKPGYL-EQLPGKLKLFSNFLGDRK------------WFAGEKLTFVDFLMFDVLEQNRIFEPKCLEPFKNLKDFMDRFGALEKVAAYMKSSRFLKMPI 208
BLAST of EWM27422.1 vs. NCBI_GenBank
Match: gi|683931904|ref|XP_009095569.1| (PREDICTED: glutathione S-transferase Mu 3-like isoform X2 [Serinus canaria]) HSP 1 Score: 119.398 bits (298), Expect = 8.234e-29 Identity = 66/238 (27.73%), Postives = 112/238 (47.06%), Query Frame = 0
Query: 64 TLGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWCQMGREGKRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTGGLWLVGGRMTVADFVLYDLLSQARTLYPPALSSHRELQDFTYRFEALPSIAQYLGSEACQLLPL 301
LG W R A+R LL Y E P++D+ + G PDY + W++ K++ D +P+ G T + + I+RY+ R++ + G +E VD+L +++ DF ++L + +NP + + K + L +L F ++L + K W G ++T DF+++D+L Q R P L + L+DF RF AL +A YL S Q +P+
Sbjct: 3 VLGYWDIRGLAHAIRLLLEYTETPYEDKLYSCGEAPDYDKSQWINEKEKLGLDFPNLPYFIDGPTK--------------------LTQSNAILRYIARKHNMCGETEEETLRVDMLENQIMDFRMSLVMVCYNPDFEKLKPGYLEQ-LPGKLKLFSNFLGDRK------------WFAGEKLTFVDFLMFDVLDQNRIFEPKCLEPFKNLKDFMERFGALEKVAAYLKSSRFQKMPI 207
BLAST of EWM27422.1 vs. NCBI_GenBank
Match: gi|975094453|ref|XP_015262052.1| (PREDICTED: glutathione S-transferase Mu 1-like isoform X1 [Gekko japonicus] >gi|975094455|ref|XP_015262053.1| PREDICTED: glutathione S-transferase Mu 1-like isoform X2 [Gekko japonicus]) HSP 1 Score: 119.013 bits (297), Expect = 1.147e-28 Identity = 67/230 (29.13%), Postives = 107/230 (46.52%), Query Frame = 0
Query: 64 TLGSWRAREYGQAVRYLLAYLELPWKDRFFDMGPGPDYHQLAWVDAKDEAAHDKAVVPFSAQGLTTYLVVEERGWCQMGREGKRKGVKHARTIMRYLGRQYGLIGRNVKEMEAVDLLLDELQDFTLALHRLVHNPSYAREKERFFTTALASRLGGFEDWLLNEKKTHKKSSPTGGLWLVGGRMTVADFVLYDLLSQARTLYPPALSSHRELQDFTYRFEALPSIAQYLGS 293
LG W R A+R LL Y E P++D+ + G PDY + W+ K++ D +P+ G T + + I+RY+ R++ + G +EM VD+L +++ DF ++L + +NP + + K + L +L F +L N K W G ++T DF++YD+L Q R P L + L+DF FEAL IA Y+ S
Sbjct: 4 ILGYWDIRGLAHAIRLLLEYTETPYEDKLYSCGEAPDYDKSQWISEKEKLGLDFPNLPYLIDGKTK--------------------LTQSNAILRYIARKHKMCGETEEEMCRVDMLENQVMDFRMSLVMVCYNPDFEKLKPGYLEQ-LPGKLKLFSQFLGNRK------------WFAGEKITFVDFLMYDVLDQNRMFEPKCLDQFKNLKDFLAHFEALEKIAAYMRS 200 The following BLAST results are available for this feature:
BLAST of EWM27422.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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