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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100107g3.4502.mrna |
| Orig protein id | gnl|cribi|Naga_100107g3.4502 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:1039986..1042353 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3224 ID=rna3224|Name=rna3224|organism=Nannochloropsis gaditana|type=mRNA|length=1720bp
AAGGATGAAATGGAGGGAAACATTTTGATAATAAGATTTACACACCAGCT
CAGGGATTGTGTTTGTTTTCATCTGTCAATTTTTTCCTTGCCAGGTACCT
CGCGGATTGCCTCGAGGACTTACGAACAAACAGCCCTCTTCAAGCAAGCA
AGTCAAAGTTTTCCGCACGGACTCTTTCGACGCAAAAACTGAAAGGTTTT
CATCTCAAGTGGTGACATGAGCACTTTTTCAAGTGACCGCAGCGCTCTTT
TTGCCAAGAGCACAGACGGCAAAGGGAGCAAGTCCACATCTCCGAATCGG
CCAGGCACCACGAGCACATTTACAACACCTTCGGCAAGGGGGTCCTCCAC
TTTGTCTTCTACTCGCCACACCCCTCTATCCTCTTACCGAACGGGCGATG
TGGCTGCTGCTGTACCGAAGAGGATGAATCTAGAAAAACTTAAGGAAGCG
GAGCAGTGGCGCGTGAAAGCTGTGAAAACGTTGAAAACCTCCTTGTTTGG
AAATTGGCAGCCTGATTATCTGTCAGCTGCGCCGTATTTCGACAAAGCTG
CATCGTTGTACAAGGCAGCGGGGGCGGAGGAGCAGGCAAAGGCAGCATAT
ATGAAATCCGCGGAATGCAACGAAAAAACTAGCACGTATGCGGCCGCGGC
CATGGCGTACCGAAATGCTGCTCAAATTGCCAAAGTGGAGGAGGAGGAAG
AAGCAGCCGGAGAGCTCTTGGCACGAGAGGCAGACATGTGGGTGCTGCAG
GGCGACGTGGGCCGCGCCGCTGACTCCCTGGTCAAAGCTGGAGTCCAGGT
GGAAGACGCCTGCCCCAAACAGGCCGTTGCGTACTGCCTCCAAGGCGTTT
CCTGGCTCGCACCCGACCAAGGAGAAAGCGTCGACCTCCGGAGCGCCCCC
TTGGCCAGCGACGTGCTGAGCCGATCCCTCAATCTGTGTCTTAGGAACGA
ACAGGTGCATCCTGCCCTCGACATCTCCGACAAGGCGGGGCGGGTTTTGC
GGGCGCAGGGCCTGACCTCCTCTCTGTACAAGATGTACTGTACCACCACG
GTCCTACAGCTGTACATCGGCGATGTGGTCGCCGCGGACAAGACTTTCTT
GGAGGTGCATCTGCAGGACTCTGGGTACATCCGTTCGGTGGAGTGTGAGT
GCGCCGAGAATTTGTTGTCAGCCGCCAAGGGCCTGTCGAGGACGGCCTTG
GAGGGGGCAGTCCACGCGCTCTCCCGGGCGTATTTGGACAACAGCGTCCT
CAAATTCGCCCGACGCTTGACAGTGGATCGGATCTCGGGGGGGCTGGGGG
GGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGAAGGAGGGAAGGAAC
GGCGGACCGCAGCATGGGGGAATGGGCCCTTCTCTAAGTGCCCCCGAAGC
CCCCCTTCTCCTCCTCCTCCTTCCGGCCTTGAGCCTCCTGAGGCCAGGGC
CATTCCCACAGGGACGCAGTTGCCGGGGAGGCCGCCTGCCCCCCCCATGC
CGCCCAAACCTGCCGCTTCCTCCTCCGCTTTTTCCTCTTCCTCCTCCTTC
CTCTTCGAACGGAGCAAAGCCGAAGCACCGTCCCCTCCTCCCTCCACGTT
CCCAGGGAGGCAGCCTTTTTCTCCTGAATCTCCCTCGTTGAGTCAGACTT
TCCTGGACATGACAGACCTGCAAGCCGAAGTGTTGAATTACGGGTGTCGG
GAGGGAACGAGGGAAGAGGA back to topprotein sequence of rna3224 >rna3224-protein ID=rna3224-protein|Name=rna3224|organism=Nannochloropsis gaditana|type=polypeptide|length=329bp
MMMRAPLPATASAFPGPGGGGGGGSGIGGGGGQAGSSLRGANPSRIHAAV
PALAPQQRTVVLQRILKDQATFLATQSTPSADLGSETLSWYWDSSEKRTH
NLEYMYRAILNFCLFRVPIQDRRIVKALICLCQSSTQACASSQTRCGIPN
WFTSALLLWMTLQEFQEQASASRGAEAPNKKPDPPPPMQSESDPDVEGGR
NPGEGPAGHVGGKEEERNSGKGAGKTNWTIFCPFVKQQCRPQVVTFLHII
RLQLQAEEFLYMKLEKRTPRLWISRSGLPALPVECLLAIVRFVKQIFEGD
MEIGRLAQKAEGTVLEIVAERGEERKKEG back to topmRNA from alignment at CM002460.1:1039986..1042353- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3224 ID=rna3224|Name=rna3224|organism=Nannochloropsis gaditana|type=mRNA|length=2368bp|location=Sequence derived from alignment at CM002460.1:1039986..1042353- (Nannochloropsis gaditana)
CATGTCTTGCATCCCATGACAGCTCGTTGATAAATATTCTCCGCAGCGGT
AAAAGCGCGGGATTTGCAAGGCTGTCCTAGCATAGCTGTAGCGTGTGTCT
AGACAGACGCGGCGGACAGGAGGGGGAAAGGAGAGCGGAGAGTGCGTCGG
GAAGGGACTGTTCCGGTGGAAGCTGCTTTCATTCCTCCTTGGAGAATTTG
AACAAAAAGTCAGAAATTTGTTGGCGCGTGACAAAGTGGGAGTAAAAAGG
ACACGCTCCTAGTCATGATGATGAGAGCGCCATTACCCGCCACTGCGTCT
GCATTTCCCGGGCCGGGAGGAGGAGGAGGAGGAGGGAGCGGGATCGGCGG
TGGAGGTGGACAAGCGGGCAGTAGTCTACGAGGCGCTAACCCCTCGCGTA
TCCATGCCGCTGTACCAGCATTGGCGCCACAACAGCGGACAGTGGTGCTG
CAACGGATCTTGAAGGATCAGGCCACCTTCTTGGCGACTCAGAGCACCCC
GTCCGCAGACCTTGGTTCAGGTTGGGGCGGAGGAAAAGGAAGAAATTAGT
CGGGGAAAATAGATGTATGTTTCGCAATCGCCGCGGCAGAGGCGTCGCTC
AGATTTAGTGCTGTCCCTCGGTGCTGGTATAGGACGGTGATTCTCACTGC
TCCCTCCCTCCTTTCCCAACTTCTCCAGAGACATTGAGTTGGTACTGGGA
TTCGAGCGAGAAGCGGACGCACAACCTGGAGTACATGTACCGGGCTATAT
TGAATTTTTGCCTCTTTCGGGTTCCGATCCAGGACCGACGCATAGTCAAA
GCCTTGATTTGCCTGTGTCAATCCTCCACGCAGGCATGTGCCTCTTCCCA
GACCCGGTGCGGTATCCCCAACTGGTTTACCTCGGCCTTGCTGCTGTGGA
TGACGTTGCAGGAGTTTCAGGAACAGGCCTCCGCATCGCGGGGAGCGGAA
GCCCCCAACAAGAAACCGGACCCGCCCCCCCCGATGCAGTCAGAAAGCGA
CCCGGATGTGGAGGGGGGGAGGAATCCGGGGGAGGGACCAGCAGGCCATG
TGGGAGGCAAAGAAGAGGAGAGGAACAGCGGTAAAGGCGCAGGGAAAACG
AATTGGACGATATTCTGCCCTTTTGTAAAGCAACAGTGCCGGCCGCAAGT
CGTCACTTTTCTCCACATCATCCGACTCCAGCTTCAAGCAGAGGTGCGGC
AGCATGAAGAGCCTTTGACCCTTGCCTCCTTGTCCACTTTTTTTCTTTCC
CTTTCCTGCGCCTTAATGTGCTGATCATTTCCCCCGCCGTGTGGACTTCT
TCTTGTCAGGCGTCCATCTCATCTTTCCTCATTCTCCTTCTCTGCTCAGG
AGTTCCTGTACATGAAGCTTGAAAAACGAACGCCTCGGCTCTGGATCAGT
CGCAGCGGCCTCCCCGCCCTCCCCGTGGAGTGCCTGCTGGCGATTGTTCG
GTTCGTCAAACAGATCTTTGAGGGGGATATGGAAATCGGAAGACTGGCGC
AGAAGGCAGAAGGGACTGTTCTGGAGATCGTGGCTGAGCGGGGGGAGGAA
AGGAAAAAAGAAGGATAGGTGGAGGGGGCGTGTGGGAAGGGAGACCTGTC
ATCAAGAGCGTAAAGTGGCTTCAATTTGTGCATAGGTACATGAGAATAGG
AAGAAGGTGAAGCAAAGCGGTTTTCAAAGGTACATAAGGTGACAAACGGG
AGGGGCAAGGTGTCCTTGAAGGACAAATATGTACAACGAACAGAAGGTGG
CGAAGCGAGGGACAACATAGCATGCATAAAGGAGGCGCTGCAGTAAATTA
TTTTAGAGAGATACCTGGAACAGTAGTCGCCTCCCTCGTCGGAGCCAGGC
GATTATCTCCATCGTTCTTTATATCTCTCCTCTCGTCATTCCTAATTTGA
AAGAGCTTTACCGCACACAAATAAGAAACCAGGTTTGCGGACGGTTACAT
TCAGGACTTGCAGGGCCCTGATATGTTGCATAGCAGCGAGAATTTGCACA
TTCTACACACAGATGTATAGCATTACAAAACGTATTTTTGTACCTTCGCT
TACTATATCTCTGCTTGGAGAGCTACATTTCTAGGGTGTGGTGGTCATCG
GGGCGATTGTGGCAACGTTAGCTGAGTTGGAGGGACATAGACATAGCGAT
GGGATATGCGTATGAATGGCACCACTTATAAAATTTCCAGTATTATCCTG
TGCGAGACCTGCCTGTCGTTCAGTCTTGAAGGGCAAAGAAAGAAGCAGAC
TTTGAACTCCCATCGGGGTGGTCTTCTCGCCCGGACAGCGGCTAATCACT
TTGACTCGTGCTCACGACTAGCAAGTTTTGACATGAACAGAATATATATA
TGCTCGCTATTATGCCTC back to topCoding sequence (CDS) from alignment at CM002460.1:1039986..1042353- >rna3224 ID=rna3224|Name=rna3224|organism=Nannochloropsis gaditana|type=CDS|length=2970bp|location=Sequence derived from alignment at CM002460.1:1039986..1042353- (Nannochloropsis gaditana)
GAGTTCCTGTACATGAAGCTTGAAAAACGAACGCCTCGGCTCTGGATCAG
TCGCAGCGGCCTCCCCGCCCTCCCCGTGGAGTGCCTGCTGGCGATTGTTC
GGTTCGTCAAACAGATCTTTGAGGGGGATATGGAAATCGGAAGACTGGCG
CAGAAGGCAGAAGGGACTGTTCTGGAGATCGTGGCTGAGCGGGGGGAGGA
AAGGAAAAAAGAAGGATAGAGACATTGAGTTGGTACTGGGATTCGAGCGA
GAAGCGGACGCACAACCTGGAGTACATGTACCGGGCTATATTGAATTTTT
GCCTCTTTCGGGTTCCGATCCAGGACCGACGCATAGTCAAAGCCTTGATT
TGCCTGTGTCAATCCTCCACGCAGGCATGTGCCTCTTCCCAGACCCGGTG
CGGTATCCCCAACTGGTTTACCTCGGCCTTGCTGCTGTGGATGACGTTGC
AGGAGTTTCAGGAACAGGCCTCCGCATCGCGGGGAGCGGAAGCCCCCAAC
AAGAAACCGGACCCGCCCCCCCCGATGCAGTCAGAAAGCGACCCGGATGT
GGAGGGGGGGAGGAATCCGGGGGAGGGACCAGCAGGCCATGTGGGAGGCA
AAGAAGAGGAGAGGAACAGCGGTAAAGGCGCAGGGAAAACGAATTGGACG
ATATTCTGCCCTTTTGTAAAGCAACAGTGCCGGCCGCAAGTCGTCACTTT
TCTCCACATCATCCGACTCCAGCTTCAAGCAGAGATGATGATGAGAGCGC
CATTACCCGCCACTGCGTCTGCATTTCCCGGGCCGGGAGGAGGAGGAGGA
GGAGGGAGCGGGATCGGCGGTGGAGGTGGACAAGCGGGCAGTAGTCTACG
AGGCGCTAACCCCTCGCGTATCCATGCCGCTGTACCAGCATTGGCGCCAC
AACAGCGGACAGTGGTGCTGCAACGGATCTTGAAGGATCAGGCCACCTTC
TTGGCGACTCAGAGCACCCCGTCCGCAGACCTTGGTTCAGGAGTTCCTGT
ACATGAAGCTTGAAAAACGAACGCCTCGGCTCTGGATCAGTCGCAGCGGC
CTCCCCGCCCTCCCCGTGGAGTGCCTGCTGGCGATTGTTCGGTTCGTCAA
ACAGATCTTTGAGGGGGATATGGAAATCGGAAGACTGGCGCAGAAGGCAG
AAGGGACTGTTCTGGAGATCGTGGCTGAGCGGGGGGAGGAAAGGAAAAAA
GAAGGATAGAGACATTGAGTTGGTACTGGGATTCGAGCGAGAAGCGGACG
CACAACCTGGAGTACATGTACCGGGCTATATTGAATTTTTGCCTCTTTCG
GGTTCCGATCCAGGACCGACGCATAGTCAAAGCCTTGATTTGCCTGTGTC
AATCCTCCACGCAGGCATGTGCCTCTTCCCAGACCCGGTGCGGTATCCCC
AACTGGTTTACCTCGGCCTTGCTGCTGTGGATGACGTTGCAGGAGTTTCA
GGAACAGGCCTCCGCATCGCGGGGAGCGGAAGCCCCCAACAAGAAACCGG
ACCCGCCCCCCCCGATGCAGTCAGAAAGCGACCCGGATGTGGAGGGGGGG
AGGAATCCGGGGGAGGGACCAGCAGGCCATGTGGGAGGCAAAGAAGAGGA
GAGGAACAGCGGTAAAGGCGCAGGGAAAACGAATTGGACGATATTCTGCC
CTTTTGTAAAGCAACAGTGCCGGCCGCAAGTCGTCACTTTTCTCCACATC
ATCCGACTCCAGCTTCAAGCAGAGATGATGATGAGAGCGCCATTACCCGC
CACTGCGTCTGCATTTCCCGGGCCGGGAGGAGGAGGAGGAGGAGGGAGCG
GGATCGGCGGTGGAGGTGGACAAGCGGGCAGTAGTCTACGAGGCGCTAAC
CCCTCGCGTATCCATGCCGCTGTACCAGCATTGGCGCCACAACAGCGGAC
AGTGGTGCTGCAACGGATCTTGAAGGATCAGGCCACCTTCTTGGCGACTC
AGAGCACCCCGTCCGCAGACCTTGGTTCAGGAGTTCCTGTACATGAAGCT
TGAAAAACGAACGCCTCGGCTCTGGATCAGTCGCAGCGGCCTCCCCGCCC
TCCCCGTGGAGTGCCTGCTGGCGATTGTTCGGTTCGTCAAACAGATCTTT
GAGGGGGATATGGAAATCGGAAGACTGGCGCAGAAGGCAGAAGGGACTGT
TCTGGAGATCGTGGCTGAGCGGGGGGAGGAAAGGAAAAAAGAAGGATAGA
GACATTGAGTTGGTACTGGGATTCGAGCGAGAAGCGGACGCACAACCTGG
AGTACATGTACCGGGCTATATTGAATTTTTGCCTCTTTCGGGTTCCGATC
CAGGACCGACGCATAGTCAAAGCCTTGATTTGCCTGTGTCAATCCTCCAC
GCAGGCATGTGCCTCTTCCCAGACCCGGTGCGGTATCCCCAACTGGTTTA
CCTCGGCCTTGCTGCTGTGGATGACGTTGCAGGAGTTTCAGGAACAGGCC
TCCGCATCGCGGGGAGCGGAAGCCCCCAACAAGAAACCGGACCCGCCCCC
CCCGATGCAGTCAGAAAGCGACCCGGATGTGGAGGGGGGGAGGAATCCGG
GGGAGGGACCAGCAGGCCATGTGGGAGGCAAAGAAGAGGAGAGGAACAGC
GGTAAAGGCGCAGGGAAAACGAATTGGACGATATTCTGCCCTTTTGTAAA
GCAACAGTGCCGGCCGCAAGTCGTCACTTTTCTCCACATCATCCGACTCC
AGCTTCAAGCAGAGATGATGATGAGAGCGCCATTACCCGCCACTGCGTCT
GCATTTCCCGGGCCGGGAGGAGGAGGAGGAGGAGGGAGCGGGATCGGCGG
TGGAGGTGGACAAGCGGGCAGTAGTCTACGAGGCGCTAACCCCTCGCGTA
TCCATGCCGCTGTACCAGCATTGGCGCCACAACAGCGGACAGTGGTGCTG
CAACGGATCTTGAAGGATCAGGCCACCTTCTTGGCGACTCAGAGCACCCC
GTCCGCAGACCTTGGTTCAG back to top
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