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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100099g20.8538.mrna |
| Orig protein id | gnl|cribi|Naga_100099g20.8538 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:964871..965834 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3191 ID=rna3191|Name=rna3191|organism=Nannochloropsis gaditana|type=mRNA|length=2290bp
CAAGGTGCCTTTTCATGGTTTCACAGCGGCTTCCTGTCACTCCATTAATT
ACGCAGGTGTCCTTTCCGCTAAACACACACCCTGAGTCGCGTCTGGTCGC
CTTTGGCCTGCCAGGGGGTACCAGAGCAGGAAAATCGCGGCACTGCATAC
ACTCACAGGAAGTGATGCCCTCCACTTGCCATTATCTCTTCTGCCCTCAC
CTCTCTAAATCATGATTGAAATCCTACCTGTGAGCTCTCGTGAAGAGCTA
AAGGAATTTTTGTCGGCCAAACCCAAGGCCATACTGGGATTTCATGCTTA
TTGGCTTCGAGGTTCTTCCGCTCTTGTTGAACTCGTCCTTCACCAGGCGG
CTGCGGCGTTAACTGCTCCCGTGCCCACATCTATCACGTCAAAGGAGGAA
AGAGAAAATCAGGATGTGATAGTGACAGCGATTGAGGAGGTAGTCCTGGG
GCTTTTGGACGTAGGGCTGCACGAAGACTTGGCATTCGAGGCCGATGTGG
GCATGCTGCCTTGCTTCAACTTCTACCGCGACGGCCGATTGGTCGATGGG
ATCCGGGCGGATGGCAACTACGGGCATGGAAATAAGTTAGGAAACGGGAG
GAAGGGGGCGGCTTGGATGATCCAGCGGTGTCTCGCCTTTGTAACCACCA
TGGAGGAGGACGTGGGATACATCGACGTGAGTAGAGGGGATACCCCTTCA
CTGTCCGCCACGCAGCTCCTTTCAGCCTCCACGGCACCCCGATCTTTCTA
CCTGGTGAACGCCATCCCCCCCGGCGAACCCCTCAATCTCTTTATCGCAG
GCGACCGTTCCAAAGTCGGCAAGTCCAGCGTCTGCCTGGCGCTTCTCGGC
TCCCTCCTTCGCCTGGGTTTTGCTCCGGGAGACCTTGCCTACATCAAACC
CGCCACCCAATGCGAGGCGCCGCAGCTTGTCACGGCTTGGTGCGACAGTG
TTGGGATCGCCAACCGTGGCATCGGCCCTGTTGTCTTTTACAAGGGCTTT
ACGCGAGAGTTCTTGAAGGGGAATGCGGGCACCTCCGCAGACTTGCTCCG
GGAGGCCTGTGAGGGCGTGCGTTCCGTGGGAACAGGGAAAAAAATCGTAC
TGGTGGACGGCGTAGGCTACCCGGCGGTGGGATCCATCTGCGGCATCAGC
AACGCGGACATTGCGCGGGCCTTAGGGGCCTGCCCTGTGCTGTTGGTGGG
CCGGTCGGGGGTTGGCGATGCGGTCGATTCTTTCAACCTGCACGCCACTT
ATTTCCGGCACCAGGGCGTGAAGGTGCTCGGCGCGGTATTCAACCGACTG
CCTCTGGAAGGTTTTTATTCCTTGGCGGCTTGTCGGGAGGCAGTGGGCGG
ATATTTTGCGAAATTCCAGTCCCAGAGCAAGGCGTATGGGTTTTTGCCCG
AGGTGGCCTCTTTGGGAAAAGTGCGCGAAGAGATGGAAGCGGAGCACGCG
GCGGGGCAGAAGCCGGGTGAAGAGAAGGCGAAGCGGATGGAGATGGTCCA
AGTCCTGGTGGAGGCATTCCGAGAGCATGTGGATTTGGAGGGGCTTTTGC
AGGACGCGTGGGAGTACCGGTTGGAAGAAAGGGAAGGACGGCGCTTATCG
GGGGGAAAGGCAACCGTTGGAGGGAGGAGGAGGGGAAGAGAAGTGCCATC
CGATGTGGACTTTGCGGAGTCTGGGCAAGGGAAGGCAGTGCAGGAAGGGG
GAGGGGGAGGGGGGGGCATTTGTGCTTTTGTCCCGGGCCAGAAACGGAAA
AGTAGGGGAGAGATCGAGCAAGAGGCCAAGAAGCAGGGGGCCAAGGGGGG
ATGAGGATCGTAATCCCTCGAAGGTTCACGGGGAGCGAGACCGAGGGGAT
GAGGGACGTGCCGAACCTGTCGTTTTCTGCTTTCTCTTCCATGCATATGC
AGCATGCCCGTGAAGCTTCGAGGACTGGAGGGAGGGGGGGAGGGAGAGAG
GGAGGGGGGGCGGCTGGATCCTGCCTTCCATGATGACGGCACCTTCAACG
CAAGGTATTCTTGTGAGGTGGCTTGACCAGGCCATGCTTTCAAGAGCTAC
CAGTGGAGGTCCTGAGACGGGGGCAAGGTCTCAGCCGCGGAGGGGAAGGC
ACGAGGGCGGGGAGAGGCCCGCTCTTTGTTGATAGTAAAGACATGACGCA
CTGCCGACGAGATTGCTCGGTGACTTATTTTTTAAAAATTGCTTACAAGG
TGCCCTTGGCCCCGTCTTTTTCTCTATTTCTGGCTCCGAATCCCCTCTTT
CTCGCCTTCCACCGAGCCGCTAGGACTCCTTCCCACTCTA back to topprotein sequence of rna3191 >rna3191-protein ID=rna3191-protein|Name=rna3191|organism=Nannochloropsis gaditana|type=polypeptide|length=254bp
MAYVSKSHDEALEELAIRLARVEAKIFGPGDDNILHIRASSSEGGSPERR
ACPMELWQRVLKASKCVEEYARRMGEKPVLNELETELFNAPHSLSRSAFR
RKGFPPASINQAAAPPDGPSVPPPSSNVLVGIPEKTTLVLAKEEETRRTL
ALLSEIDELKAFISGPFLEGGGHREEAALYTQLQRVERDFWDVEAVAFAL
TREMEEVLTVYDEVVERLSGKCVEWEGVLAARWKARKRGFGARNREKDGA
KGTL back to topmRNA from alignment at CM002460.1:964871..965834- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3191 ID=rna3191|Name=rna3191|organism=Nannochloropsis gaditana|type=mRNA|length=964bp|location=Sequence derived from alignment at CM002460.1:964871..965834- (Nannochloropsis gaditana)
TACACTCGCTATATATTCAGGCATAACCTCGCACTCGCTTTGAAATTTAA
CGCCCGTCCTGACAGCAGGATTACGCACGGGGAGCCAGCGCCTGAGATAG
ACTCTATCGCTCGAAGTGGACGCTTCACGGCCTTCGGCGAGAGTTTCAGC
TCCAGCACCATAACGCATCTCTTACATGGCTTATGTGTCGAAATCGCACG
ACGAGGCATTGGAAGAATTGGCCATACGACTGGCTAGGGTAGAGGCTAAG
ATCTTCGGTCCTGGAGACGATAATATCCTCCACATTCGTGCCTCGTCTTC
TGAGGGAGGGAGCCCGGAAAGGCGAGCGTGCCCCATGGAGCTGTGGCAAA
GGGTACTCAAAGCCTCCAAATGCGTCGAGGAATATGCCCGCAGAATGGGT
GAAAAACCAGTTCTAAACGAGCTTGAAACGGAGCTTTTCAATGCGCCACA
CTCACTTTCCCGGAGTGCATTCCGAAGAAAGGGCTTCCCTCCTGCCTCGA
TAAATCAAGCAGCTGCGCCTCCTGACGGCCCCTCTGTTCCCCCTCCCTCC
AGTAATGTGCTGGTGGGAATACCGGAAAAGACCACACTGGTCCTCGCTAA
AGAAGAGGAGACGCGTCGAACGCTGGCGCTATTGTCAGAGATTGACGAGC
TGAAAGCCTTTATCTCCGGACCTTTTTTAGAAGGGGGGGGGCACAGGGAG
GAGGCAGCTTTGTACACGCAACTACAGCGCGTGGAGAGGGACTTCTGGGA
CGTGGAAGCCGTGGCTTTTGCCCTGACAAGGGAGATGGAGGAGGTCTTGA
CGGTGTACGACGAGGTTGTGGAGCGGCTTTCGGGCAAATGTGTAGAGTGG
GAAGGAGTCCTAGCGGCTCGGTGGAAGGCGAGAAAGAGGGGATTCGGAGC
CAGAAATAGAGAAAAAGACGGGGCCAAGGGCACCTTGTAAGCAATTTTTA
AAAAATAAGTCACC back to topCoding sequence (CDS) from alignment at CM002460.1:964871..965834- >rna3191 ID=rna3191|Name=rna3191|organism=Nannochloropsis gaditana|type=CDS|length=765bp|location=Sequence derived from alignment at CM002460.1:964871..965834- (Nannochloropsis gaditana)
ATGGCTTATGTGTCGAAATCGCACGACGAGGCATTGGAAGAATTGGCCAT
ACGACTGGCTAGGGTAGAGGCTAAGATCTTCGGTCCTGGAGACGATAATA
TCCTCCACATTCGTGCCTCGTCTTCTGAGGGAGGGAGCCCGGAAAGGCGA
GCGTGCCCCATGGAGCTGTGGCAAAGGGTACTCAAAGCCTCCAAATGCGT
CGAGGAATATGCCCGCAGAATGGGTGAAAAACCAGTTCTAAACGAGCTTG
AAACGGAGCTTTTCAATGCGCCACACTCACTTTCCCGGAGTGCATTCCGA
AGAAAGGGCTTCCCTCCTGCCTCGATAAATCAAGCAGCTGCGCCTCCTGA
CGGCCCCTCTGTTCCCCCTCCCTCCAGTAATGTGCTGGTGGGAATACCGG
AAAAGACCACACTGGTCCTCGCTAAAGAAGAGGAGACGCGTCGAACGCTG
GCGCTATTGTCAGAGATTGACGAGCTGAAAGCCTTTATCTCCGGACCTTT
TTTAGAAGGGGGGGGGCACAGGGAGGAGGCAGCTTTGTACACGCAACTAC
AGCGCGTGGAGAGGGACTTCTGGGACGTGGAAGCCGTGGCTTTTGCCCTG
ACAAGGGAGATGGAGGAGGTCTTGACGGTGTACGACGAGGTTGTGGAGCG
GCTTTCGGGCAAATGTGTAGAGTGGGAAGGAGTCCTAGCGGCTCGGTGGA
AGGCGAGAAAGAGGGGATTCGGAGCCAGAAATAGAGAAAAAGACGGGGCC
AAGGGCACCTTGTAA back to top
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