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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100948g1.182.mrna |
| Orig protein id | gnl|cribi|Naga_100948g1.182 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:916284..917443 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3174 ID=rna3174|Name=rna3174|organism=Nannochloropsis gaditana|type=mRNA|length=1316bp
CTCGTTTCTGCCATCTTAGTTCAAAGGAGCACAATACTTCATCTGGTGCC
TGAAAGTGGATAGCTTATCCATGAAAGGGAAGGAATGTTGCTGGCTTTGC
TTACGTCCTTGGGTGTCCTCGACAACCCTCATTAGACCACCCTTTTTCAT
CTCACTTATCGATGATCCCGCACAGGTTAAGCTTTTCCCTTGGATTGTCC
TTTACTTGCAAGCACACTGACCGTGATCCTGCCTCAGCGCGATACTTTGA
GCGGTGGCCATGGGCGGTCGCATCTCCTCCCTCGTCTTCCAACCTCCCTC
CAAACGTTCGCACATAAACTCCACCAAATACATCATCCTACCCACCAGCA
AAGGAAACAGAATTCCGGCTTTTTACTTTGACCGGTCGGCACATATAACT
GTGCTGGTATCGCACGGAAACGCCGAAGATTTGGGTATGATCTATGACCA
ATTTTTTGACTTCTCTCGGCAACTCAACGTGAACGTTATGGCCTACGAAT
ATTCCGGGTACGGGAGGGCGACTGGGTCGCCTTCGGAAAGCAATTGCTAC
GCCGATATCGACGCTGCTTTCAAGTATTTGGTGGAAATCAAGAAAGTCGT
GCCCTCACGATTGGTGCTGTTGGGGCGATCGATTGGCAGCGGTCCCAGCT
GTTACCTTGCCGAACGTCTCGCTTTGTCTGGCACGCCCGTGGGTGGAGTG
ATGCTACAGAGTCCCGTCCTCTCTATACTCCGAGTGGTCCTCCCAGACCT
GCGTTGGACCTGGTGGGGCGACATGTTTCCCAACGTGGATCGGGTCAAGA
GGATGGAATGCCCCATCTTCGTCATCCATGGCACGCGGGACGAGATCGTT
CCTTTCCGTCACGGGCAAGACTTATTCCTGGCCACTCCCGTGCAATGGAG
AGCAAGACCATTGTGGGTGGAGGGAGGCGGGCACAATGACCTGGAGGGGC
GGTTGCGGCAGGAGGGGACATATTTTTCCTGCGTTTTGGAATTTTTGCGC
GAATGGTGTTCGGGGGAGGGAGGGGGGCATAGGGGTCTTCACGGCAGTGT
CTATTAGGGGGTGCGTTGATGCCTGGCGATGGGGCCGGAAGGAGACACGA
AGATGGAAAACAGGGAGGTGGGGTCCACCAAGAGGGGTAGAACGTGGGCG
ACGGTGTAATGTATTGTAGACGATAGCGGGCCATCGCAATGACAGCCAAA
GTACATATTCACGGGCGAGGACACGGGGGGGACGATAAAACCAACCGAAG
ACTAACGCGTTCTCCTATCGAACCCGTTCCCGAAGGCGGGAAGCCAAAGC
ACGCGCGCCGTCTTCA back to topprotein sequence of rna3174 >rna3174-protein ID=rna3174-protein|Name=rna3174|organism=Nannochloropsis gaditana|type=polypeptide|length=347bp
MDWKLPPALGAHAGSGGNAGVEMGLEAPSPSFSLAATSQGTGMVAHPGSS
NGDAGDRAMNLTLGSSFEAAASMARAGLKPGYGEGAYYPQAPLATAWSPD
AHPLCHALLMTPSGMTGRVEAHRRRQGGRGEGNEWGSSPGVTDEFLIGLS
DGSQGVLPESMLRTCIERLEAHTAGNQAQLQTLRERDAEGENGAGRGGSG
VGEGAWEGGGGGQGGGQGPGTAKAVTKRAQKAQGQQRRETGGGKKGGRAG
GTGVTGAPVERLCVPLPRAPAGKASLTPEERRRCLEFVRRLASPYFARDF
CHPVSELHPEVWEEVRREMGSSGLSGRRFFGIFRDLSALYLSGGNIT back to topmRNA from alignment at CM002460.1:916284..917443+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3174 ID=rna3174|Name=rna3174|organism=Nannochloropsis gaditana|type=mRNA|length=1160bp|location=Sequence derived from alignment at CM002460.1:916284..917443+ (Nannochloropsis gaditana)
TTTCCGCACGTGCCCGGCTATCCATGACTTGACACTTTGCCATgtcccac
gcctccctcttgacccTCATATGGCTACAGGTGGGGCGGCCGTATGGATT
GGAAATTACCGCCGGCGCTTGGGGCACATGCTgggagcggaggaaacgCC
GGGGTGGAAATGGGTTTAGAGGCACCTTCgccgtctttctcccttgcagC
AACTAGTCAGGGCACTGGAATGGTCGCACACCCTGGGAGCAGCAATGGTG
ACGCCGGCGATAGAGCTATGAATCTCACTCTTGGGTCCTCTTTTGAAGCC
GCTGCGTCGATGGCACGTGCCGGACTTAAACCCGGCTATGGAGAGGGAGC
TTACTACCCTCAGGCCCCTTTGGCGACGGCCTGGTCCCCGGACGCCCACC
CGCTCTGCCACGCGCTCCTAATGACACCCTCCGGGATGACGGGTCGTGTT
GAAGCCCATCGACGCcgtcaaggaggacggggggagggaaatgagtGGGG
CTCGTCCCCCGGGGTGACGGATGAGTTTTTGATTGGATTGTCTGATGGGA
GCCAGGGAGTATTGCCGGAATCGATGCTTCGAACGTGCATAGAGCGCCTG
GAGGCACACACTGCTGGGAACCAAGCACAGCTTCAAACTctcagggagag
ggatgcgGAGGGTGAAAACGGggcaggcagaggagggagcggcgtgggag
agggagcatgggaaggagggggaggaggacaaggaggaggccaggggccG
GGAACTGCGAAGGCTGTGACGAAGCGCGCACAGAAAGCGCAAGGTCAGCA
GCGTCGGGagacgggcggagggaaaaaggggggccGCGCGGGTGGCACAG
GCGTCACAGGAGCCCCTGTTGAGCGCTTGTGCGTGCCCCTCCCTAGGGCC
CCCGCCGGCAAAGCCTCCTTGACGCccgaggaaaggagacgcTGCTTGGA
ATTCGTCCGGCGCTTGGCCAGCCCATATTTCGCCAGGGACTTTTGCCACC
CGGTGTCGGAGCTGCATCCGGAGGTGTGGgaagaggtgaggagggagatg
ggtTCATCGGGCTTGTCGGGAAGGAGATTCTTCGGCATTTTTCGGGATTT
GTCGGCGCTGTATCTTTCGGGGGGCAATATTACATGAGCTTGTATGCATG
TGTGTTGTTG back to topCoding sequence (CDS) from alignment at CM002460.1:916284..917443+ >rna3174 ID=rna3174|Name=rna3174|organism=Nannochloropsis gaditana|type=CDS|length=1044bp|location=Sequence derived from alignment at CM002460.1:916284..917443+ (Nannochloropsis gaditana)
ATGGATTGGAAATTACCGCCGGCGCTTGGGGCACATGCTgggagcggagg
aaacgCCGGGGTGGAAATGGGTTTAGAGGCACCTTCgccgtctttctccc
ttgcagCAACTAGTCAGGGCACTGGAATGGTCGCACACCCTGGGAGCAGC
AATGGTGACGCCGGCGATAGAGCTATGAATCTCACTCTTGGGTCCTCTTT
TGAAGCCGCTGCGTCGATGGCACGTGCCGGACTTAAACCCGGCTATGGAG
AGGGAGCTTACTACCCTCAGGCCCCTTTGGCGACGGCCTGGTCCCCGGAC
GCCCACCCGCTCTGCCACGCGCTCCTAATGACACCCTCCGGGATGACGGG
TCGTGTTGAAGCCCATCGACGCcgtcaaggaggacggggggagggaaatg
agtGGGGCTCGTCCCCCGGGGTGACGGATGAGTTTTTGATTGGATTGTCT
GATGGGAGCCAGGGAGTATTGCCGGAATCGATGCTTCGAACGTGCATAGA
GCGCCTGGAGGCACACACTGCTGGGAACCAAGCACAGCTTCAAACTctca
gggagagggatgcgGAGGGTGAAAACGGggcaggcagaggagggagcggc
gtgggagagggagcatgggaaggagggggaggaggacaaggaggaggcca
ggggccGGGAACTGCGAAGGCTGTGACGAAGCGCGCACAGAAAGCGCAAG
GTCAGCAGCGTCGGGagacgggcggagggaaaaaggggggccGCGCGGGT
GGCACAGGCGTCACAGGAGCCCCTGTTGAGCGCTTGTGCGTGCCCCTCCC
TAGGGCCCCCGCCGGCAAAGCCTCCTTGACGCccgaggaaaggagacgcT
GCTTGGAATTCGTCCGGCGCTTGGCCAGCCCATATTTCGCCAGGGACTTT
TGCCACCCGGTGTCGGAGCTGCATCCGGAGGTGTGGgaagaggtgaggag
ggagatgggtTCATCGGGCTTGTCGGGAAGGAGATTCTTCGGCATTTTTC
GGGATTTGTCGGCGCTGTATCTTTCGGGGGGCAATATTACATGA back to top
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