Naga_100101g15, gene3035 (gene) Nannochloropsis gaditana

Overview
NameNaga_100101g15
Unique Namegene3035
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:870366..875623 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100101g15
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:870366..875623 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G02740NO09G02740Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3158rna3158-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3158rna3158Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3158

>rna3158-protein ID=rna3158-protein|Name=rna3158|organism=Nannochloropsis gaditana|type=polypeptide|length=1483bp
MPDECLAHMTENATSSYLVVFFRLASSALQLVKDTDVAPATWDVPRTSAN
PPLLCGWCRCPCHIALPTTSLPGRRPGNKNRVRASPLQIRPSHPFFALLL
VGTRHSQPTVRAAAVDLLGTLLQYWSNVMDRAQGEPSKDSWSSESLRDVA
TALPDMTWWVLVTLSEGVRENGKGNQDVNFDKIAEIWRSITSMLGPSAAG
DVLISSVNRYLDGDLSVPESSGSGENCRAITRTSKAIVLLGGKSPSGTRD
KGLTLVVEAVRKPGTAFERAALLLGQWHEEMQTGKEKGEGRIVLWNAFNT
NLLRLKASAPEPDPCESRRWMMAAAVALVQGGVRADLTEMQDIEKPGILF
WALMEAIKEEKDKMRQTLAGGALVRLGLGALNCGRGQEGFEKAVKNLCLL
ACLKEHGRGLPARVGAREALKQLASKVDNPFVYFGGPSFWGRFQASIKPR
PRWLVGEGCLRHWEKIDAYEDELGNLKDDEDKLEMCDQLRISPEDAIRVV
MVVTPAAPEAFMAQLAFCLPALVRRATMDEVDDVHNTKLVNMLAARAASN
IFKQVPLTDVALKAHEMALILDHSLRRRRSPREEDKRPRAAFCLFEVTKA
LTESPGPRHVKAALPFLLPVAMATIVDDNAEVRLYGLQSFNLLVGVVPLM
EPKDWFVESKRDHSCKKEGFKTTSTFELRQSALLHLLLGGQVKLAHASEG
SQGKKLLTLPDRLPSLFRKGLVLRPYQWDGIMWLTLLRRAGLHGALCDDM
GLGKTLQTLVAMAVARCEAEDGGKEGEDQVEHCRPQILAHSLPSLVLCPA
TLSGHWYFEARRFLLPETVVTVQYAAGLSSLEKERALEGLDSRHLVVASY
EMLRRDNAWKGSMQQAEEVGEGGAREGRGLLMRQAWNYIIFDEVHVLRGG
ERTLLGKAVRNLRGQHRLGLTGTPLQNQVQDVWGVFDVLMPGLLGTKQVF
ERSYGRPIGKATMRSASADATAEALGKLDDLHTHLLPFLLRREKGKVLKD
LPPKTVTDLACELTQLQREMYDGHCHTKRATEVLTGLQALVDRDDGAAKG
REGVDRESLKEQLGAQALRLLQYLRLLCVHPALVLESGSRVRGQLLREIE
CSGKMLALQNLLFACNVVKDLEEGDGGSRDGGNEEQAIDGNVIGFCATEG
MLENFEDGVSQGSGGMGPEGEDEHISQEGESEIEDIPRMHTNLRAQSPKA
IESTSGFPSDFREDLHRCLIFAQHRVTLDAIETSILARAQWNPAYAELED
ASSRPEIGTGEDSGSTIGCETRSAASMNFTTGTRYLRLDGSVPSWRRESL
VQRFNQDKSIPLMLLTTRVGGLGLNLTGADVVIFVEHDWNPAVDLQAMDR
AHRIGQSRPVNVYRLVTRGTVEEQVMALQRRKQHLADAVVTEQNASSLTV
GAGMSAVLDLVAGSITGDKSQESIDFFGVGTTNKDGSGGEMAKGLSSLSA
GVLSEEPWGEEQYDSFAVERFLADVVANSSEIA
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Synonyms
Publications