EWM27542.1, cds3133 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27542.1 vs. NCBI_GenBank
Match: gi|585109809|gb|EWM27542.1| (hypothetical protein Naga_100015g16 [Nannochloropsis gaditana]) HSP 1 Score: 535.798 bits (1379), Expect = 0.000e+0 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0 Query: 1 MTMKFLKLCTSKIKSEPSKFQALHRGLVQSFGSTKTAPLDPQIESNTWCKQADPEMAIWAAPIIHDILELYHCRVHDPRVYNRYAPDAVFDDPAGILRGRPAIRVAMEALPKIFRTGEPKDVHITYHAPLVGGERNGFRNGDEHKGQEQVGPQARIALVQTYVWRQDILPLSLSPGVLLGQGNSTSVELPTVVFLTFDAKTHLITRHEDRWWGKDTTTSSPHLRPVHSIIKQLNGRAWEVWGARCYGNIRHNEERK 256 MTMKFLKLCTSKIKSEPSKFQALHRGLVQSFGSTKTAPLDPQIESNTWCKQADPEMAIWAAPIIHDILELYHCRVHDPRVYNRYAPDAVFDDPAGILRGRPAIRVAMEALPKIFRTGEPKDVHITYHAPLVGGERNGFRNGDEHKGQEQVGPQARIALVQTYVWRQDILPLSLSPGVLLGQGNSTSVELPTVVFLTFDAKTHLITRHEDRWWGKDTTTSSPHLRPVHSIIKQLNGRAWEVWGARCYGNIRHNEERK Sbjct: 1 MTMKFLKLCTSKIKSEPSKFQALHRGLVQSFGSTKTAPLDPQIESNTWCKQADPEMAIWAAPIIHDILELYHCRVHDPRVYNRYAPDAVFDDPAGILRGRPAIRVAMEALPKIFRTGEPKDVHITYHAPLVGGERNGFRNGDEHKGQEQVGPQARIALVQTYVWRQDILPLSLSPGVLLGQGNSTSVELPTVVFLTFDAKTHLITRHEDRWWGKDTTTSSPHLRPVHSIIKQLNGRAWEVWGARCYGNIRHNEERK 256
BLAST of EWM27542.1 vs. NCBI_GenBank
Match: gi|676387987|ref|XP_009037272.1| (hypothetical protein AURANDRAFT_64475 [Aureococcus anophagefferens] >gi|323452021|gb|EGB07896.1| hypothetical protein AURANDRAFT_64475 [Aureococcus anophagefferens]) HSP 1 Score: 69.3218 bits (168), Expect = 1.551e-10 Identity = 67/209 (32.06%), Postives = 89/209 (42.58%), Query Frame = 0 Query: 55 EMAIWAAPIIHDILELYHCRVHDPRVYNRYAPDAVFDDPAGILRGRPAIRVAMEALPKIFRTGEPKDVHITYHAPLVGGER------NGFRNGDEHKGQEQVGPQARIALVQTYVWRQDILPLSLSPGVLLGQGNSTSVELPTVVFLTFDAKTHLITRHEDRWWGKDTTTSSPHLRPVHSIIKQLNGRAW-EVWGARCYGNIRHNEERK 256 +M WAAPI I + R + Y AVFDDP G + R I EA+ +F + K TYH PL G+ G +GD V QAR V TY +R+ PLS + L + + LTF A I HEDRWWG+ TT L H + K+ +G A+ V+G R +R + K Sbjct: 12 DMEAWAAPICATIQRAHCGRFDGAALRALYGEGAVFDDPCGTIP-RAGIVAGFEAIRWLFDV-DAKHEPWTYHPPLFRGQALSEDAVGGAGDGD------VVPAQARCRQVATYAFRR--APLSFA--------------LESTIVLTF-ADDRRIAVHEDRWWGRATT-----LNAAHGLFKRAHGAAFAAVFGDRTPQALRPDTSAK 190 The following BLAST results are available for this feature:
BLAST of EWM27542.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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