EWM27585.1, cds3083 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27585.1 vs. NCBI_GenBank
Match: gi|585109852|gb|EWM27585.1| (hypothetical protein Naga_100015g72 [Nannochloropsis gaditana]) HSP 1 Score: 2147.09 bits (5562), Expect = 0.000e+0 Identity = 1082/1082 (100.00%), Postives = 1082/1082 (100.00%), Query Frame = 0
Query: 1 MTEAKANSIFPPPHGEDNKAVDDHVGKEEGCDNPVLEQRCTEAGVGLASIGVPPRRVGNPSGRDLKRIKIVSPPGGADAATASDSVAATSTSMTWTAMAIAATAAGTADGISVGQEEDTEELLPQEEEMSDLEDPASTNLHRLASVLLNQHLQSPSRSTSPVIGGSPLSSPPLLLSPSEIDHARLLFSAGDTGADVDEDDEKDEKEREDNVGGEKGGRDAGIGSKGLELVVRLLRLGGPPASRPPPPLSPSPSSPPPKNPAHQDSLSLIMPSPNDSSGGSGLSPIPRVSVEGPEDAFRPVRSPRGSGAGNILPESPHSLLRDGERAQRAPGRDLQEDEGEEDGEAMEEEDLEEGEGEEAAMTKMPLPFAPSVAGLLVAQQHPQSHHHHRIGNVRTINSAHSRNVSSESSVQGLPRPTSHHNGRKHKSKPPLPPVPRAPMELLWGGPGADAVDPAGLPSLGASVPPLPARSAKVRSRGPPNELADVTAVARLVVALRYEDPKQASPRMSTLVAAFRSSPDFRLPMIQAITQASHDRIVELGAVSRELMAMEKDLKGAMHRDHGVGLAELLSNLVVCIREEMGLRSPELLTDEEEEEEGAGLGSGGMEAGGTSEEDQAGLAKAVEGNVDEVDPEILAATAWKTCQEGPHKAQEEGGGIAGGEFPECGPEESSVPLVGLGQGAKAAGRDGSEDRGEQWRGLEAGVGPVRAQGGTPPSVFPASALPCPSEAQLEVPVHGDGDAEEAGRCNVFPVALRPGPQGPARTKPLDSSSLGAPESALSPAIRWEHGVLLLQESLMALGMFLRAHSRRRGSSANALDKAEMEHIRDAVTEMIAAYPPTALRIVHLILRAWPCGHSAREMGFLQLLGVVLTVAPPLFRLDPRTNVLRRAVARLTRCLESSHAGVAEEALVVCSQPRVISSFSGAGALGGDGGAPGGLQGRVHEALVRSSEGHWSAEVRQEARRLRDLLAVMKTGSDAEDSLDGIGGVAGIPVALRMTEGGICGFCLRQRIDANQLWIAVHTRLSVMKKGEHDEHEEVERDTGPSLAERVWPKSLHGRKSHGLHPIICSLLNHWRCKSSSVHSGI 1082
MTEAKANSIFPPPHGEDNKAVDDHVGKEEGCDNPVLEQRCTEAGVGLASIGVPPRRVGNPSGRDLKRIKIVSPPGGADAATASDSVAATSTSMTWTAMAIAATAAGTADGISVGQEEDTEELLPQEEEMSDLEDPASTNLHRLASVLLNQHLQSPSRSTSPVIGGSPLSSPPLLLSPSEIDHARLLFSAGDTGADVDEDDEKDEKEREDNVGGEKGGRDAGIGSKGLELVVRLLRLGGPPASRPPPPLSPSPSSPPPKNPAHQDSLSLIMPSPNDSSGGSGLSPIPRVSVEGPEDAFRPVRSPRGSGAGNILPESPHSLLRDGERAQRAPGRDLQEDEGEEDGEAMEEEDLEEGEGEEAAMTKMPLPFAPSVAGLLVAQQHPQSHHHHRIGNVRTINSAHSRNVSSESSVQGLPRPTSHHNGRKHKSKPPLPPVPRAPMELLWGGPGADAVDPAGLPSLGASVPPLPARSAKVRSRGPPNELADVTAVARLVVALRYEDPKQASPRMSTLVAAFRSSPDFRLPMIQAITQASHDRIVELGAVSRELMAMEKDLKGAMHRDHGVGLAELLSNLVVCIREEMGLRSPELLTDEEEEEEGAGLGSGGMEAGGTSEEDQAGLAKAVEGNVDEVDPEILAATAWKTCQEGPHKAQEEGGGIAGGEFPECGPEESSVPLVGLGQGAKAAGRDGSEDRGEQWRGLEAGVGPVRAQGGTPPSVFPASALPCPSEAQLEVPVHGDGDAEEAGRCNVFPVALRPGPQGPARTKPLDSSSLGAPESALSPAIRWEHGVLLLQESLMALGMFLRAHSRRRGSSANALDKAEMEHIRDAVTEMIAAYPPTALRIVHLILRAWPCGHSAREMGFLQLLGVVLTVAPPLFRLDPRTNVLRRAVARLTRCLESSHAGVAEEALVVCSQPRVISSFSGAGALGGDGGAPGGLQGRVHEALVRSSEGHWSAEVRQEARRLRDLLAVMKTGSDAEDSLDGIGGVAGIPVALRMTEGGICGFCLRQRIDANQLWIAVHTRLSVMKKGEHDEHEEVERDTGPSLAERVWPKSLHGRKSHGLHPIICSLLNHWRCKSSSVHSGI
Sbjct: 1 MTEAKANSIFPPPHGEDNKAVDDHVGKEEGCDNPVLEQRCTEAGVGLASIGVPPRRVGNPSGRDLKRIKIVSPPGGADAATASDSVAATSTSMTWTAMAIAATAAGTADGISVGQEEDTEELLPQEEEMSDLEDPASTNLHRLASVLLNQHLQSPSRSTSPVIGGSPLSSPPLLLSPSEIDHARLLFSAGDTGADVDEDDEKDEKEREDNVGGEKGGRDAGIGSKGLELVVRLLRLGGPPASRPPPPLSPSPSSPPPKNPAHQDSLSLIMPSPNDSSGGSGLSPIPRVSVEGPEDAFRPVRSPRGSGAGNILPESPHSLLRDGERAQRAPGRDLQEDEGEEDGEAMEEEDLEEGEGEEAAMTKMPLPFAPSVAGLLVAQQHPQSHHHHRIGNVRTINSAHSRNVSSESSVQGLPRPTSHHNGRKHKSKPPLPPVPRAPMELLWGGPGADAVDPAGLPSLGASVPPLPARSAKVRSRGPPNELADVTAVARLVVALRYEDPKQASPRMSTLVAAFRSSPDFRLPMIQAITQASHDRIVELGAVSRELMAMEKDLKGAMHRDHGVGLAELLSNLVVCIREEMGLRSPELLTDEEEEEEGAGLGSGGMEAGGTSEEDQAGLAKAVEGNVDEVDPEILAATAWKTCQEGPHKAQEEGGGIAGGEFPECGPEESSVPLVGLGQGAKAAGRDGSEDRGEQWRGLEAGVGPVRAQGGTPPSVFPASALPCPSEAQLEVPVHGDGDAEEAGRCNVFPVALRPGPQGPARTKPLDSSSLGAPESALSPAIRWEHGVLLLQESLMALGMFLRAHSRRRGSSANALDKAEMEHIRDAVTEMIAAYPPTALRIVHLILRAWPCGHSAREMGFLQLLGVVLTVAPPLFRLDPRTNVLRRAVARLTRCLESSHAGVAEEALVVCSQPRVISSFSGAGALGGDGGAPGGLQGRVHEALVRSSEGHWSAEVRQEARRLRDLLAVMKTGSDAEDSLDGIGGVAGIPVALRMTEGGICGFCLRQRIDANQLWIAVHTRLSVMKKGEHDEHEEVERDTGPSLAERVWPKSLHGRKSHGLHPIICSLLNHWRCKSSSVHSGI 1082
BLAST of EWM27585.1 vs. NCBI_GenBank
Match: gi|553177244|ref|XP_005852448.1| (hypothetical protein NGA_0704100 [Nannochloropsis gaditana CCMP526] >gi|422296086|gb|EKU23385.1| hypothetical protein NGA_0704100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 483.026 bits (1242), Expect = 2.581e-160 Identity = 244/245 (99.59%), Postives = 245/245 (100.00%), Query Frame = 0
Query: 1 MTEAKANSIFPPPHGEDNKAVDDHVGKEEGCDNPVLEQRCTEAGVGLASIGVPPRRVGNPSGRDLKRIKIVSPPGGADAATASDSVAATSTSMTWTAMAIAATAAGTADGISVGQEEDTEELLPQEEEMSDLEDPASTNLHRLASVLLNQHLQSPSRSTSPVIGGSPLSSPPLLLSPSEIDHARLLFSAGDTGADVDEDDEKDEKEREDNVGGEKGGRDAGIGSKGLELVVRLLRLGGPPASRPP 245
MTEAKANSIFPPPHGED+KAVDDHVGKEEGCDNPVLEQRCTEAGVGLASIGVPPRRVGNPSGRDLKRIKIVSPPGGADAATASDSVAATSTSMTWTAMAIAATAAGTADGISVGQEEDTEELLPQEEEMSDLEDPASTNLHRLASVLLNQHLQSPSRSTSPVIGGSPLSSPPLLLSPSEIDHARLLFSAGDTGADVDEDDEKDEKEREDNVGGEKGGRDAGIGSKGLELVVRLLRLGGPPASRPP
Sbjct: 1 MTEAKANSIFPPPHGEDDKAVDDHVGKEEGCDNPVLEQRCTEAGVGLASIGVPPRRVGNPSGRDLKRIKIVSPPGGADAATASDSVAATSTSMTWTAMAIAATAAGTADGISVGQEEDTEELLPQEEEMSDLEDPASTNLHRLASVLLNQHLQSPSRSTSPVIGGSPLSSPPLLLSPSEIDHARLLFSAGDTGADVDEDDEKDEKEREDNVGGEKGGRDAGIGSKGLELVVRLLRLGGPPASRPP 245 The following BLAST results are available for this feature:
BLAST of EWM27585.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|