Naga_100059g1, gene2901 (gene) Nannochloropsis gaditana

Overview
NameNaga_100059g1
Unique Namegene2901
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:506602..511108 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100059g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:506602..511108 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL127ngnoL127Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G01280NO09G01280Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3022rna3022-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3022rna3022Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3022

>rna3022-protein ID=rna3022-protein|Name=rna3022|organism=Nannochloropsis gaditana|type=polypeptide|length=1242bp
MGRGPNAGGGRGRREFVARGGAGRGGRGGRGSGRAAGGGRGGRGGGESGR
VSSDRGRGGSSSGGGGGASGRNPGGGGGAGGGRDGAGLKKNHVVIGAENK
RLMLELLKQLHLTDGDGDDGMGGAELLNLLLKEEKRVFLENNLVNAATKK
SAAVRQKEAQRLATRGRSSRVQVIICAWHHPETTQKRVVVGRVPNLTTLF
EAARDTLFIKRPKAAFVLETGLYLSDTMAVEQDTVICVTTKVPEAAGVPL
PGGGGLVLPLTPAERAARREEMEQSKAAAAAADQQKLEDIKEGYRVRAIR
RAAGGKKRHERSPAESEALSRMLKQRLERVMETRGYREMLWARERLPIWS
MREEVVRLVEENTVIVLSGATGSGKSTQVPQFLLDHYIEGGRGSQVNILV
TQPRRISAISLCERVAAERCVEVGRDVGYSIRLEARVSDSTALTFVTTGL
LLRRLQEDPDLQGVSHVVIDEVHERDIHSDFLLIIMQELLERRKGLKLIL
MSATLQADLFQEYFGNCPAVHVPGRTFPVRHVFLEDIEAKLASVKSVPGM
SQGGVGGNGRGGGGRGGGRGRGLGGRGNGGGRGLGKEHRQLSNGSLKGIG
NENGNGVAGPPLISPKAEDPIDYQLIVKLLTLLVTIREADDNEVGGAVLV
FFSGFQEINELCKLMAAHAVLGNPKRVQAYPLHSSLPSDAQRAVFRRMPK
GVTKIVVATNIAETSITIDDISSVIDSGRVKEMRYDAETHMSSLVSVWTS
QAAASQRAGRAGRVREGTCFRLYSKSFMEAQMPKYTLPEMLRTPLEELSL
TILALELGSPADFLARAIEPPPPEAISTAVKNLREIDALRKQKDLDTKEV
SYYLMPLGFHLANLPCDARIGKMLIIGSILGCLEPILTIAACLSYKSPFS
NPFGMQQEADRAHAKYGSALSDHIAALEAYNGWAELRNEPYRVRKDYCTE
NFLSIATLEQIEALRKELRRQLIDIGFGAGEPRKMYGGGRGAAGRAGQPG
GRGNAEGGGGGCDGGRSNDDEKCRDNQSHKSARAVRAGANDEDGHTVDDI
GGGSDGKGTPALDVNLIRCCLFAALYPQVGKLVRPQKTGEGATFELRDKT
KVAVHPGSINFTRLMNLAPSGKDAFLLYHKKVQSTKIYAYDSTFVSPFTI
LLFGGDIKIQWEHGSLEGDQSIAVTMDNWLSFRMTASSAVLVKYIRHELN
QLLLEKFSDPVQAMEEKRKAKAQAVVQSIKRLLTSDRNSLGI
back to top
Synonyms
Publications