EWM27666.1, cds3006 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27666.1 vs. NCBI_GenBank
Match: gi|585109937|gb|EWM27666.1| (Tesmin/TSO1-like cysteine-rich [Nannochloropsis gaditana]) HSP 1 Score: 1573.53 bits (4073), Expect = 0.000e+0 Identity = 766/766 (100.00%), Postives = 766/766 (100.00%), Query Frame = 0 Query: 1 MAAARQSPSLEDESEAAKALWEITNSPGLAKKGSSCLTPRGPAGRDYLMGFPTPQGLGHGSPSVNYNRFFSPSQFSWSPLPGQSPALQSLSSHSYDCQSSQHPPSMPSFFSSMPQSSSITNLSEKDTLNRHVQEATTSKVLHRDATGVTIGERETKKKAYSKKLDFAGTCDEKASCVWLSLDSETQRVARGGPGAAPPASPAAALQGSIMRESHFFVSRSPFKQQAEDYEGFLASSAGRGAESINENDFACKNGRTASSKNRGTPIQSNLDKSKTNGDKCEIELGGHCKGCAEQEDGAISVSGQKQENKDDEEQRLHAAEVLLNEATGIKLWGARQNLPPPPPVKTIPMNKHGGSNWGGIQVRVKKKAPQHSLSADPSLLEAIAAMIPSREASSSPPQTNFGMPPPQSPRTTTASRGGFAPGSPVLEAMAMVTLSQSPSVFSSDRKKGNASRPCLSAPRVLMPSTQEPFSGIQNFSAGAPASEPVRVLDAGMQYQTPTTGSKNSYCERRSEGTPSSGSCCCKKSRCLKLYCECFRGGFTCQPSCKCQNCANVAECEAERAEAVDKIMEKKRRKSAGSAGRMQGGSSLDGEMNSVAGSPSSLRGLDLDSGVKIGSRPYVVRASEQEREFYEAAFSSTSLATELDAHMARRPRPSIGTGITSRGTSNVIFTVKSPDTTFTPVQRRSKRKNVGDGTPDIPVPGKPARPTPKGRGTGRKDEFLLSVFGPRSRVNKQNSLEVLSYLDRDDMADASLVSSLWNRLALETLDE 766 MAAARQSPSLEDESEAAKALWEITNSPGLAKKGSSCLTPRGPAGRDYLMGFPTPQGLGHGSPSVNYNRFFSPSQFSWSPLPGQSPALQSLSSHSYDCQSSQHPPSMPSFFSSMPQSSSITNLSEKDTLNRHVQEATTSKVLHRDATGVTIGERETKKKAYSKKLDFAGTCDEKASCVWLSLDSETQRVARGGPGAAPPASPAAALQGSIMRESHFFVSRSPFKQQAEDYEGFLASSAGRGAESINENDFACKNGRTASSKNRGTPIQSNLDKSKTNGDKCEIELGGHCKGCAEQEDGAISVSGQKQENKDDEEQRLHAAEVLLNEATGIKLWGARQNLPPPPPVKTIPMNKHGGSNWGGIQVRVKKKAPQHSLSADPSLLEAIAAMIPSREASSSPPQTNFGMPPPQSPRTTTASRGGFAPGSPVLEAMAMVTLSQSPSVFSSDRKKGNASRPCLSAPRVLMPSTQEPFSGIQNFSAGAPASEPVRVLDAGMQYQTPTTGSKNSYCERRSEGTPSSGSCCCKKSRCLKLYCECFRGGFTCQPSCKCQNCANVAECEAERAEAVDKIMEKKRRKSAGSAGRMQGGSSLDGEMNSVAGSPSSLRGLDLDSGVKIGSRPYVVRASEQEREFYEAAFSSTSLATELDAHMARRPRPSIGTGITSRGTSNVIFTVKSPDTTFTPVQRRSKRKNVGDGTPDIPVPGKPARPTPKGRGTGRKDEFLLSVFGPRSRVNKQNSLEVLSYLDRDDMADASLVSSLWNRLALETLDE Sbjct: 1 MAAARQSPSLEDESEAAKALWEITNSPGLAKKGSSCLTPRGPAGRDYLMGFPTPQGLGHGSPSVNYNRFFSPSQFSWSPLPGQSPALQSLSSHSYDCQSSQHPPSMPSFFSSMPQSSSITNLSEKDTLNRHVQEATTSKVLHRDATGVTIGERETKKKAYSKKLDFAGTCDEKASCVWLSLDSETQRVARGGPGAAPPASPAAALQGSIMRESHFFVSRSPFKQQAEDYEGFLASSAGRGAESINENDFACKNGRTASSKNRGTPIQSNLDKSKTNGDKCEIELGGHCKGCAEQEDGAISVSGQKQENKDDEEQRLHAAEVLLNEATGIKLWGARQNLPPPPPVKTIPMNKHGGSNWGGIQVRVKKKAPQHSLSADPSLLEAIAAMIPSREASSSPPQTNFGMPPPQSPRTTTASRGGFAPGSPVLEAMAMVTLSQSPSVFSSDRKKGNASRPCLSAPRVLMPSTQEPFSGIQNFSAGAPASEPVRVLDAGMQYQTPTTGSKNSYCERRSEGTPSSGSCCCKKSRCLKLYCECFRGGFTCQPSCKCQNCANVAECEAERAEAVDKIMEKKRRKSAGSAGRMQGGSSLDGEMNSVAGSPSSLRGLDLDSGVKIGSRPYVVRASEQEREFYEAAFSSTSLATELDAHMARRPRPSIGTGITSRGTSNVIFTVKSPDTTFTPVQRRSKRKNVGDGTPDIPVPGKPARPTPKGRGTGRKDEFLLSVFGPRSRVNKQNSLEVLSYLDRDDMADASLVSSLWNRLALETLDE 766
BLAST of EWM27666.1 vs. NCBI_GenBank
Match: gi|1210529211|dbj|GAX12357.1| (hypothetical protein FisN_1Hh290 [Fistulifera solaris]) HSP 1 Score: 76.2554 bits (186), Expect = 1.455e-10 Identity = 69/272 (25.37%), Postives = 119/272 (43.75%), Query Frame = 0 Query: 515 SSGSCCCKKSRCLKLYCECFRGGFTCQPSCKCQNCANVAECEAERAEAVDKIMEKKRRKSAGSAGRMQGGSSLDGE---MNSVAGSPSSLRGLDLDSGVKIGSRPYVVRASEQEREFYEAAFSSTSLATELDAHMARRPRPSIGTGITSRGTSNVIFTV-----------KSPDTTFTPVQRRS----------KRKNVGDGTPDIPVPGKPARPTPKGRGTGRKDEFLLSVFGPRSRVNKQNSLEVLSYLDRDDMADASLVSSLWNRLALE 762 S+ C CK+S CLK YC+CF G C PSCKC +C N+A + +DK + K K A A R+ G+ A SP+++R + +G G + + + + R + A+ ++S+ + P + G R + + + +T F ++RS KN TP I + P+ + K + G +L++FG + + K+ L + S+L D+ +AS+VS W R+A++ Sbjct: 504 STSGCRCKRSFCLKKYCDCFVAGQFCGPSCKCVDCQNLAGSQT----LIDKRRKMKDSKGAEYAVRV-AHEVWQGQRAPQQGPAASPANIRSSKVPAGAVHGHQ--MPQRTMSHRGYMHPAYMTSSVMGHIGYSTMGVPPVTPMFGQQQRAHEMQMRAMMQHYKPEDQSTNATETKFASSKKRSCPPETSPPVTTSKNTAPRTPPIRIEFDPSS-SRKSKSEGE----MLTLFG-KPKQPKRTVLNIFSFLTNTDIYNASIVSKEWGRIAMD 762
BLAST of EWM27666.1 vs. NCBI_GenBank
Match: gi|1210520155|dbj|GAX21038.1| (hypothetical protein FisN_1Lh290 [Fistulifera solaris]) HSP 1 Score: 74.3294 bits (181), Expect = 5.570e-10 Identity = 74/275 (26.91%), Postives = 119/275 (43.27%), Query Frame = 0 Query: 515 SSGSCCCKKSRCLKLYCECFRGGFTCQPSCKCQNCANVAECEAERAEAVDKIMEKKRRKSAGSAGRMQGGSSLDGEMNSVAG---SPSSLRGLDLDSGVKIGSRPYVVRASEQEREFYEAAFSSTSLATELD------------------AH------MARRPRPSIGTGITSRGTSNVIFTVKSPDTTFTPVQRRSKRKNVGDGTPDIPVPGKPARPTPKGRGTGRKDEFLLSVFGPRSRVNKQNSLEVLSYLDRDDMADASLVSSLWNRLALE 762 S+ C CK+S CLK YC+CF G C PSCKC +C N+A + +DK + K K A A R+ G+ G SP ++R +L +G G + + + + R + A+ ++S+ + AH M + +P + + S P+T+ TPV + KN TP + + P+ + +E +LS+FG + K L V S+L D+ +AS+VS W R+AL+ Sbjct: 497 STSGCRCKRSYCLKKYCDCFVAGQFCGPSCKCVDCQNLAGSQT----LIDKRRKMKDSKGAEYAVRV-AHEVWQGQRAPQQGPPVSPGNMRSSNLPAGAVHGHQ--MSQGTMSHRGYMHPAYMTSSVMGHIGYSTIGVPPVTPMFGQQQRAHEMQMRAMMQHYKPEDQSTKATETKSASSKKRPCPETS-TPV---TASKNTAPRTPPVRIEFDPSS-----SRKSKSEEEMLSLFG-DPKQPKHTILNVFSFLTNADIYNASIVSKEWGRIALD 754
BLAST of EWM27666.1 vs. NCBI_GenBank
Match: gi|971512206|dbj|GAQ85983.1| (hypothetical protein KFL_002640050 [Klebsormidium nitens]) HSP 1 Score: 73.9442 bits (180), Expect = 9.158e-10 Identity = 30/51 (58.82%), Postives = 33/51 (64.71%), Query Frame = 0 Query: 519 CCCKKSRCLKLYCECFRGGFTCQPSCKCQNCANVAECEAERAEAVDKIMEK 569 C CK SRCLKLYCECF G C P C CQ C N AE E R EAV+ +E+ Sbjct: 419 CNCKNSRCLKLYCECFASGHYCGPECNCQGCCNNAENEVTRQEAVEATLER 469
BLAST of EWM27666.1 vs. NCBI_GenBank
Match: gi|1179547107|ref|XP_020694559.1| (protein tesmin/TSO1-like CXC 5 [Dendrobium catenatum]) HSP 1 Score: 72.7886 bits (177), Expect = 1.382e-9 Identity = 52/133 (39.10%), Postives = 65/133 (48.87%), Query Frame = 0 Query: 444 DRKKGNASRPCLSAPRVLMPSTQEPFSGIQNFSAG-----APASEPVR-VLDAGMQYQTPTTGSKNSYCERRSEGTPS-SGSCCCKKSRCLKLYCECFRGGFTCQPSCKCQNCANVAECEAERAEAVDKIMEK 569 D GN P LS+P V +P Q P APA R + ++ ++P T SK + EGTP+ +C CK SRCLKLYCECF G C C C NC N E EA R EAV+ +E+ Sbjct: 51 DFTPGNCVAPTLSSPVVPVPFEQSPLPSTLQQQQNQKQMLAPALSISRPSIPMSIKPESPQTRSKPLF--EMKEGTPTRKKNCNCKHSRCLKLYCECFASGVYCD-GCNCANCFNNVENEAARHEAVEATLER 180
BLAST of EWM27666.1 vs. NCBI_GenBank
Match: gi|585102880|gb|EWM22379.1| (tesmin tso1-like cxc domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 72.4034 bits (176), Expect = 2.159e-9 Identity = 30/51 (58.82%), Postives = 35/51 (68.63%), Query Frame = 0 Query: 519 CCCKKSRCLKLYCECFRGGFTCQPSCKCQNCANVAECEAERAEAVDKIMEK 569 C CK+SRCLKLYC+CF C PSC CQNC N A RAEA+ +IME+ Sbjct: 387 CNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMER 437
BLAST of EWM27666.1 vs. NCBI_GenBank
Match: gi|1000972177|ref|XP_015573062.1| (PREDICTED: protein tesmin/TSO1-like CXC 7 [Ricinus communis]) HSP 1 Score: 70.4774 bits (171), Expect = 7.716e-9 Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 0 Query: 492 MQYQTPTTGSKNSYCERRSEGTPSSGSCC-CKKSRCLKLYCECFRGGFTCQPSCKCQNCANVAECEAERAEAVDKIMEK 569 ++ Q+P++ +N+ + + GTP C CK SRCLKLYCECF G C C C NC N E EA R EAV ++E+ Sbjct: 121 IKQQSPSSRPRNNIEAKDNSGTPKKAKHCNCKNSRCLKLYCECFAAGVHC-TGCNCTNCHNNVENEASRQEAVGAVLER 198
BLAST of EWM27666.1 vs. NCBI_GenBank
Match: gi|223544370|gb|EEF45891.1| (transcription factor, putative [Ricinus communis]) HSP 1 Score: 70.4774 bits (171), Expect = 8.293e-9 Identity = 35/79 (44.30%), Postives = 47/79 (59.49%), Query Frame = 0 Query: 492 MQYQTPTTGSKNSYCERRSEGTPSSGSCC-CKKSRCLKLYCECFRGGFTCQPSCKCQNCANVAECEAERAEAVDKIMEK 569 ++ Q+P++ +N+ + + GTP C CK SRCLKLYCECF G C C C NC N E EA R EAV ++E+ Sbjct: 121 IKQQSPSSRPRNNIEAKDNSGTPKKAKHCNCKNSRCLKLYCECFAAGVHC-TGCNCTNCHNNVENEASRQEAVGAVLER 198
BLAST of EWM27666.1 vs. NCBI_GenBank
Match: gi|14587305|dbj|BAB61216.1| (P0460E08.26 [Oryza sativa Japonica Group]) HSP 1 Score: 70.0922 bits (170), Expect = 9.628e-9 Identity = 37/94 (39.36%), Postives = 51/94 (54.26%), Query Frame = 0 Query: 511 EGTPSSGSCC-CKKSRCLKLYCECFRGGFTCQPSCKCQNCANVAECEAERAEAVDKIMEKKRRKSAGSAGRMQGGSSLDGEMNSVAGSPSSLRG 603 +GTP+ CC CK S+CLKLYCECF G C C C NC N + E R EA+D +E+ A R + GSS N++ + +++ G Sbjct: 153 DGTPTKKKCCNCKHSKCLKLYCECFASGVYCD-GCNCSNCFNNVKNETARREAIDATLERN-----PDAFRPKIGSSPHANRNNMQAANAAVNG 240
BLAST of EWM27666.1 vs. NCBI_GenBank
Match: gi|553189382|ref|XP_005854991.1| (tesmin tso1-like cxc domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294067|gb|EKU21367.1| tesmin tso1-like cxc domain-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 68.9366 bits (167), Expect = 1.578e-8 Identity = 30/51 (58.82%), Postives = 35/51 (68.63%), Query Frame = 0 Query: 519 CCCKKSRCLKLYCECFRGGFTCQPSCKCQNCANVAECEAERAEAVDKIMEK 569 C CK+SRCLKLYC+CF C PSC CQNC N A RAEA+ +IME+ Sbjct: 225 CNCKRSRCLKLYCQCFAAQAFCIPSCNCQNCLNTAGQNHLRAEAIRQIMER 275 The following BLAST results are available for this feature:
BLAST of EWM27666.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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