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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100248g3.4997.mrna |
| Orig protein id | gnl|cribi|Naga_100248g3.4997 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:278454..281155 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2922 ID=rna2922|Name=rna2922|organism=Nannochloropsis gaditana|type=mRNA|length=4281bp
GTTTTATGTACACGCTTTTAGGGGGACAATGTCAGAAAGTCATGCTGGGC
TGGACGGCAGGCCCGGCGCGTGTTACGGACACCGCGCGCCGTCCTTCGTC
CCCACTGGTTTCCTGGAGAGTCTGGCAGAAACGCAGAGCACAAGCCGCTT
CAATCTTTTGCTTTTGGAGCACGGGGAGGTGTACTTTGGAGACTACGCGG
TCGTTCGCTTCCGACCCAAAGGTCGCTCTACGATCAAAGTGCCCGGCCGT
CTCAAGGTCTCATCGCGGAGTCTTGTCTTCGACCCTGTCAACGATGTCTC
CCAGCCCCTCCTCCGATTCCCTTTCAAGCACATGACCCGGGTCCCACGCC
ATGCGCCTCATGGTATGGAAGCAGCGGAATGGTCCACGCTCACTTTTTCC
TCCCCCTCCTCCTCCTTCTCCTCCTCCTCCTCTTCCCCCCCTCCCTCCTC
CTCTCTGGACGGTCTCTTCGTCTTCTCCTGCGCCTGCGTCACCGAGATGA
AGGCGAACGACCTGGTGGGGCCCTACCTGCAAAGGCAGAGCGGAGACCCT
GACGCGGAAGGCCCGGACTTCATCTTCCGGCTCCAGCACACCCCTCTGGC
GGACTTCTTGGCCCTGGTCGGACGCCTGTGCGAGGTGGCGGCGCGGTTGG
TGAAAGGGGATGGGCCGGGCCTAGGCGCGGAGGAAGCGCTGTTGCGGCCC
ATTTTGGAGGAGCGGGAGCGGGCCTCGGGGATCTTTGATCCTGTCCAGCT
CGTTGATTTCAGAGAAAAGTTTATCCTCTCGGCCGCGGTGCCCGTGGACC
GAATCTCCCCTCTGATCAAGAATCCCGGCGTCGTCATGCTCACTGACCGC
CGCTTCTATTTCCAGCCCGCCGAGCTGAACAATGTGGGCATCTCCACCAC
CTCGTTGGCCCTGGCCTCCATCGTCCAGGTCTTCAAACGACGGTACATGC
TCAGGCAAACCGGTCTGGAGATATTTTTTGCTGCGGCGGGAGAGGGAGGG
ACGGAGGGCGGGATGGAGGACGGGAAGGGGGGCGTTGGATGGGCGAGTGG
GTCTGGTAGGGGAAGCGGGAGGAGGCAGGGCGGGGGGCTCGACAGCAGAG
ACGGCGAAGGACTCGGCACGACCGCGACCAGGAGCAAAGGAGGCCAGGGG
GGCGAGGTCACAGAGGCCCCGCCCCGGGTGAACAGTGTCCTCTTTTCGTT
CCGATCCTCCCAGGAACGTGACCGGGTGCATGCCTTGCTGCTCGCCCAGC
CGGCGCTCACGGACGGCGTGCTGCAGCCTGTGCGCGTCGCGGAGGTGACT
CGTCGGTGGCAGGAGCGACGCATCTCCAACCTGGACTACCTCCTCTATCT
GAACACGCTGGCGGACCGGTCGTTCAAGGACCTGACCCAATACCCCGTCT
TCCCCTGGGTGCTGGCTGACTACACGAGCAAGAAGCTGGACTGGGAGAGC
CCGAGCACCTACCGCGATCTGAGCAAGCCGATGGGGGCTTTGCACCAGGA
GCGACTGGCTTATCTGCGGGAGCGGTACCACTCCATGCCGGAGGAAAACG
CGGAGATGGGCATCCCGCCCCCTTTTTTGTACGGCACCCACTACTCCACG
CCGGGCTACGTCCTCTTCTACCTGGTGCGGGCGGCCCCTGAGCACATGCT
CTGCCTCCAAGACGGGAAGTTCGACAGCGCGGACCGGATGTTCAGCTGCG
TGGCGGACACGTGGCAGTCCTGCCTGACCAACCCCGCCGACTTGAAGGAG
CTTATCCCCGAGTTCTACTTCTCCCAGGGCGACTTCCTCGTCAACGTGGA
GGGTCTGCCCTTGGGGACCACGCAGGGAGGGGTCAGGTTGGGCGACGTGG
CTCTCCCGCCCTGGGCCCGGAACGAAAGAGACTTCGTGCGTAAGATGCGT
CGAGCCCTCAACGACAGCACCTATGTTTCCCAGCACTTGCATGAGTGGAT
CGATCTCATCTTCGGCGTCAAGCAGAAGGGCGAGGCGGCCGTCTCCGCCG
ACAATTTATTCTACTACCTGACGTACGAAGGGGCCGTCGACTTGGAGCAG
GTGACTGATCCACTGGAAAGGGCAGCTTTCGAGGCTCAAATCCGCGAGTT
CGGACAAACCCCCAAACAGGTCTTCCTTGGGCCCCACCCGAGGAGGGACG
ACCCGCCCTCCGTCCCTGTTTTCCTGACTCCCAGCTTCCAGGACTCGTCC
TCCTCCCCGGCGGTGGGGCTGCCCTCGAACGGAGGGGGCGGGGCGCGCCC
GCGGGGGGCCTCGGAGCACGAACTGGAAGGGCCGTGGGAGATGGTTCGGG
GGGAAAGCCTGTTGCTCTCCCAGAGCCTCTCTCAGTCCCTCTCACAGAGC
ATGGGGGGAAGTGGCTGGGAGATCTTGCGCCAGGATGCGTCGGAGAGGGA
GGGTGGGAGAGAGGGCGGCGTGGGGCCGGAGGCATCCTCCCAATCGTCTC
CTGTGCACCTGAACGGTCGCGGTAGCATCCTCAGCCCCAAGACCCTCATG
GCCAAGGGGCTGGGGCTCCTGCCCCCCCCGGCCGGCACGGATAAGTGCAC
CTCAGTACAGCAGCCGGAGCAGCTCATGTTTGTGATGGATGGGGCCGAGA
GCCTGCAGTCCCCCACGAGCTTGCGGCTGAACGAACAGGCCCAGCGGACG
TTGGAGGAAATGATCCGTGTCGCCCACAACGAGGAGACTTATGCGAATGG
ATGCTCCGGTCCGACCGCGGCGGCCTCCCTGCGTGGAGGGGCCTCCAATA
CGAATGGCGATGGAGTCGTGGCAGGAGTGAGAGGGGGAGTGGACGACCTG
CCGGCGGTCGTGCGCTTGGAAGAGCTGATATCCAGGGAGGCCCTCCTGAG
CATCCCAGGCAGCACTCCTCGGCTCCTGCTTCCCCTGCCCCGTGCGGGCA
TCCACAAGGCAGAAGGAGGCTCGCAGGGGGCAGCGACTGCCTCGACCGGC
CCCGAAGATGCCCGCGACGCCCCTCGTCTCGGCCTGCTCGGGAGCCGGGC
CGTGTGTCTGCACCACGACGCGGTCACCTCCCTGAAATGGGCGGACGGGG
GGCGGTCTCTCTGCAGCACCTCGGACGACGGGAGCTTTCGTGTCAGCACC
TTGCTGATGGGGCCTCAGGACGAGGGGAAGAGAGATGAGAAGGCGTCTTT
CCAGTCCAAGCGTCACTTCTCGCCCAGCGACATCGCTCTTTCCTCCTGTG
CCTTGATGGGTGGGGAGGCGTCCGAGGGGGGATTGGAGGTCAAAGGGGAG
GGAGGCCCGGCGGCCAGCCCCCACACACTAGCTGCCCTCGGGTCCTACGA
CAACCACGTCTACCTGTATTCTATTCCCTCAGCGCGGCAGCTCTTGCGGC
TGGACGCCCACGACGACGCCGTGTCATGCCTGGACGTGGCCGGGCCCTAC
CTGGCGTCGGGGTCATGGGACGCCACGGTCAAGGTCTGGGGTATACAGTC
CTCCCGCAGCTGCGGCAGCCTCATTGAGCCGATGCCCTTGGCGGAATTCT
TCGAGCACACCACACAGGTCCACTGTGTGGCGCTGAAGGTGGAGGCGAGC
GGGACGGAGGCAGCGCTGGTGGCAGCGGGGGCGGAGGACGGGCAGGTGAT
GGTCTGGAACCTTGCGGCCAGGTGCTTGGTCTCGAGCTTCAGGGTGGGGG
GGGGGAGGCGGTGACAGGCGTCAAGTGGGGAGGCCAAGGGAATGGGGCGG
ACGGCGAGGGCTCCTTCGGGGCTGCTCCTCCATATCTGTACGCAGCAACC
GCGGGTGGCCTGCTCGGTTGTCATGCCGCGGAGGGGCCAGCCCTCGGGGT
CGCGCTGTGTGGACCGGTGAAAGGAGGGAACTCGGGAGGGAGGTGTGGCA
TACGGTGCTTGGAGGTGTCAGGGAGTCGGGACGGGAGGGACGTGCTTGCA
ACTGGGAGTGGTGACGGGAGCGTGCGCCTGTGGCTAGGTGGGGGGCCGGG
GAGGGTGGGAGGGGGGCTGCAGGTTTTGGCGGTGGTGGAGCGGGCACACG
AAGATGCGGTGACGTGCCTGGCGCTGAACTGGAGGAAGGGACGGTTGGCA
ACGGGTCACGCGGACGGTAGTGTGAATGTGTGGGGGGTGGAGAGCGATGA
GGGGGGTGGGCAGAGGAAGGGGGCAGAGGGGGGGGAGAAGCGGGATGGAG
GGTTCTAGCTGGGACTGAGAAGTGAATGGCTGACTGATTGTGTATGTACT
TGTGAACATAGCACACCACATTGAGAGGGTCGTTAATCATGCACAAAAAG
GCAATGACACGCAAGCAACTATAATTATTGA back to topprotein sequence of rna2922 >rna2922-protein ID=rna2922-protein|Name=rna2922|organism=Nannochloropsis gaditana|type=polypeptide|length=598bp
MPPSSPMYTIRILDSTTVLHSSTGACRHWAFPRRRNRAPSFSSTSPLPPM
AESCSPSSSSITTAPTGSTLPGEGGGMPAERKGRFRVKQVEAGEVEEASY
PEGDIVGGRIKASERSHVHTHDTSPSSSPHPYTSHRMGTVDMSTVSDLTD
SLSKSGKTGGEKKGRFTIRELPDLGMEGSGPSAHHPPGTPSPHVHMDPHP
HVHQSHGHHQQGHRAEHPPSHQGGLGGASSHGLPHSRPPPHPHGHHHMHG
HSLPRASSAQQLEAPYAVGGSGGTNLRPATSMQHMEGIGHGSQSEIANYR
AQGEGQSGSGRPYAPGLPPAYSQEAGSPQDQAGWRLLRQQNDLILHRLSQ
MERFFHSSPHLPGASGGVAAGGPDRAGFGPASTPGPPKSSPVHHHEMPPS
SMSSSGPGKDIGAGKLTYLLEQMKVEVEAAVSRRKEVDLQMKRLQEKNRA
LEEKVEEERRKRVETEKKYEKVKERCESMMQELDHRRGAEAGGRARAYRV
SSRRGTWRRRRAPRLRPHHQHSRNTSTCSGSSRLPCRTNPRSAPGPAPPR
PPPTRTCSRMTSYRNLRLPPSARPSPSPASPGESQASRTVCTTASPPP back to topmRNA from alignment at CM002460.1:278454..281155- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2922 ID=rna2922|Name=rna2922|organism=Nannochloropsis gaditana|type=mRNA|length=2702bp|location=Sequence derived from alignment at CM002460.1:278454..281155- (Nannochloropsis gaditana)
ATCTGTCGTTCGCGTGGCATTGAAGGGTTTAAAGCGCCGTTTACTGCGTT
CTACGCATTGCGTGCATTTGGTGTGCTCCTCGCCTCCTCTCGAGCGAAAC
CGGAAGAGTTCTTCAGGGCACTGTCGTGGATAGTTTACATGTACACGCAC
AACGACCAGGGGCAAAAAATATGCCGCCATCGAGTCCAATGTACACCATC
AGGATACTTGACTCAACGACCGTCTTGCATTCCTCCACAGGTGCGTGTCG
GCACTGGGCATTCCCACGCAGGAGGAACAGAGCGCCCAGTTTCTCGTCGA
CCTCACCTCTTCCTCCTATGGCCGAGTCCTGCTCGCCCTCCTCCTCCTCC
ATTACTACTGCCCCGACTGGTAGCACCCTTCCAGGGGAAGGAGGAGGCAT
GCCGGCGGAGCGGAAAGGGCGTTTCCGCGTAAAACAGGTGGAAGCGGGCG
AGGTCGAGGAGGCGTCCTACCCTGAGGGAGACATCGTGGGGGGAAGAATC
AAAGCCTCAGAACGTTCCCATGTACATACACATGATACTTCCCCGTCCAG
TAGTCCTCATCCATATACATCGCACCGGATGGGGACAGTGGATATGAGTA
CGGTCTCTGACCTGACGGATTCCCTGAGCAAATCGGGCAAGACGGGAGGG
GAGAAAAAAGGCCGGTTCACTATCCGTGAACTGCCTGACTTGGGCATGGA
GGGCTCAGGGCCCTCCGCGCATCATCCGCCCGGCACACCCAGCCCTCACG
TGCACATGGACCCGCACCCGCACGTTCATCAGTCCCACGGCCACCATCAG
CAAGGCCATCGCGCCGAGCATCCGCCCTCCCATCAAGGCGGCCTGGGAGG
GGCATCGAGCCATGGGCTTCCCCACTCACGGCCCCCGCCCCATCCTCACG
GGCACCACCACATGCACGGCCACTCGCTCCCACGGGCGTCCTCGGCCCAG
CAGCTCGAGGCGCCTTACGCGGTGGGGGGCTCGGGAGGAACGAACCTGCG
GCCAGCGACTTCGATGCAGCACATGGAGGGAATCGGGCATGGATCCCAGT
CCGAGATCGCAAACTATCGGGCGCAAGGGGAGGGTCAATCTGGAAGCGGG
CGCCCGTACGCCCCCGGCTTGCCCCCCGCCTACTCGCAGGAGGCGGGTTC
CCCCCAAGATCAGGCGGGATGGCGACTCCTGCGCCAGCAGAACGACCTCA
TCCTGCACCGACTCTCGCAGATGGAGCGTTTTTTCCATTCATCGCCGCAT
CTCCCAGGAGCCTCGGGGGGCGTCGCAGCCGGAGGACCGGACCGGGCGGG
TTTCGGGCCGGCGTCCACGCCAGGGCCCCCGAAGAGCAGTCCTGTCCACC
ACCACGAAATGCCTCCCTCGTCCATGTCCTCCTCCGGTCCGGGGAAGGAC
ATTGGGGCGGGGAAGCTGACTTATCTTCTGGAGCAGATGAAGGTGGAGGT
GGAGGCGGCCGTGAGTCGGCGGAAGGAGGTGGATTTGCAGATGAAGAGGT
TGCAGGAGAAGAACCGAGCGCTCGAGGAGAAGGTAGAGGAGGAGCGGCGG
AAGCGCGTGGAGACTGAGAAAAAGTATGAGAAAGTGAAGGAACGCTGTGA
GAGCATGATGCAGGAGCTAGACCACCGCCGGGGGGCGGAGGCGGGGGGGC
GGGCCCGGGCGTACCGAGTCAGCTCGCGACGGGGAACGTGGCGGAGAAGG
AGGGCCCCCCGCCTCCGCCCCCACCACCAGCACAGCCGCAACACCAGCAC
GTGCAGCGGCAGCAGCAGGCTGCCATGTCGCACCAATCCCCGCTCAGCGC
CGGGGCCAGCCCCTCCACGACCCCCCCCAACCCGCACGTGTTCGCGCATG
ACTTCCTACCGCAACCTCCGCCTCCCCCCTTCAGCGCGCCCATCCCCATC
GCCAGCAAGCCCGGGGGAATCGCAGGCCTCTCGGACAGTCTGCACGACGG
CTTCGCCTCCGCCTTGAAATTCCCGGCGGCCGTGCCTCCCCGGATGACCC
TCTCGCCAGGGCCTACGCCTGGGATCGGCACGTCGTCTGCTGTGAGCACT
CCGGGCGGAAGCAGCGGCAGCTGCGGGAGCAACAATGGTGGAATGGGCCA
AGGAGGGAGCTTGGGCGTGCTCGATCCCTTCAACGGTCTTCTGAATTCAA
GCGGGGGGATGGTGGCGGGGACAGGATCGAGTTTGGGGTGGGGAGGACCC
CGCGGGCGGGGCGCCAGCGACGTCATTTATGGCAGCAACAGTCACAGTGG
TTCCAGTCACAGTGGCAAACCGGCACAAGGCGGGCAGAACGCTCATGGGA
GGCGGGAAACAAGCTTGGTGTGAGTCTGGCCTGGCTGCCCTGGGAGCTCA
CGGGGGCTGGGCCCGTCCTGCAGGGGCCAAGTAAGCCACGATGAGAGTGG
GTCCAGGGATGTGTCATTGACTATGAGATGAGCAGTCACACAATGGATGC
TCATGTGTCGCTCACAATGGCCACAGGCCGCGTGGCTGCTCTCGGCTCAA
TTAGTCGGCTCAATTACAGTGTACATGAGAAAAATGATGGGCTTGTAGGA
CCTCAATAATTATAGTTGCTTGCGTGTCATTGCCTTTTTGTGCATGATTA
ACGACCCTCTCAATGTGGTGTGCTATGTTCACAAGTACATACACAATCAG
TCAGCCATTCACTTCTCAGTCCCAGCTAGAACCCTCCATCCCGCTTCTCC
CC back to topCoding sequence (CDS) from alignment at CM002460.1:278454..281155- >rna2922 ID=rna2922|Name=rna2922|organism=Nannochloropsis gaditana|type=CDS|length=1797bp|location=Sequence derived from alignment at CM002460.1:278454..281155- (Nannochloropsis gaditana)
ATGCCGCCATCGAGTCCAATGTACACCATCAGGATACTTGACTCAACGAC
CGTCTTGCATTCCTCCACAGGTGCGTGTCGGCACTGGGCATTCCCACGCA
GGAGGAACAGAGCGCCCAGTTTCTCGTCGACCTCACCTCTTCCTCCTATG
GCCGAGTCCTGCTCGCCCTCCTCCTCCTCCATTACTACTGCCCCGACTGG
TAGCACCCTTCCAGGGGAAGGAGGAGGCATGCCGGCGGAGCGGAAAGGGC
GTTTCCGCGTAAAACAGGTGGAAGCGGGCGAGGTCGAGGAGGCGTCCTAC
CCTGAGGGAGACATCGTGGGGGGAAGAATCAAAGCCTCAGAACGTTCCCA
TGTACATACACATGATACTTCCCCGTCCAGTAGTCCTCATCCATATACAT
CGCACCGGATGGGGACAGTGGATATGAGTACGGTCTCTGACCTGACGGAT
TCCCTGAGCAAATCGGGCAAGACGGGAGGGGAGAAAAAAGGCCGGTTCAC
TATCCGTGAACTGCCTGACTTGGGCATGGAGGGCTCAGGGCCCTCCGCGC
ATCATCCGCCCGGCACACCCAGCCCTCACGTGCACATGGACCCGCACCCG
CACGTTCATCAGTCCCACGGCCACCATCAGCAAGGCCATCGCGCCGAGCA
TCCGCCCTCCCATCAAGGCGGCCTGGGAGGGGCATCGAGCCATGGGCTTC
CCCACTCACGGCCCCCGCCCCATCCTCACGGGCACCACCACATGCACGGC
CACTCGCTCCCACGGGCGTCCTCGGCCCAGCAGCTCGAGGCGCCTTACGC
GGTGGGGGGCTCGGGAGGAACGAACCTGCGGCCAGCGACTTCGATGCAGC
ACATGGAGGGAATCGGGCATGGATCCCAGTCCGAGATCGCAAACTATCGG
GCGCAAGGGGAGGGTCAATCTGGAAGCGGGCGCCCGTACGCCCCCGGCTT
GCCCCCCGCCTACTCGCAGGAGGCGGGTTCCCCCCAAGATCAGGCGGGAT
GGCGACTCCTGCGCCAGCAGAACGACCTCATCCTGCACCGACTCTCGCAG
ATGGAGCGTTTTTTCCATTCATCGCCGCATCTCCCAGGAGCCTCGGGGGG
CGTCGCAGCCGGAGGACCGGACCGGGCGGGTTTCGGGCCGGCGTCCACGC
CAGGGCCCCCGAAGAGCAGTCCTGTCCACCACCACGAAATGCCTCCCTCG
TCCATGTCCTCCTCCGGTCCGGGGAAGGACATTGGGGCGGGGAAGCTGAC
TTATCTTCTGGAGCAGATGAAGGTGGAGGTGGAGGCGGCCGTGAGTCGGC
GGAAGGAGGTGGATTTGCAGATGAAGAGGTTGCAGGAGAAGAACCGAGCG
CTCGAGGAGAAGGTAGAGGAGGAGCGGCGGAAGCGCGTGGAGACTGAGAA
AAAGTATGAGAAAGTGAAGGAACGCTGTGAGAGCATGATGCAGGAGCTAG
ACCACCGCCGGGGGGCGGAGGCGGGGGGGCGGGCCCGGGCGTACCGAGTC
AGCTCGCGACGGGGAACGTGGCGGAGAAGGAGGGCCCCCCGCCTCCGCCC
CCACCACCAGCACAGCCGCAACACCAGCACGTGCAGCGGCAGCAGCAGGC
TGCCATGTCGCACCAATCCCCGCTCAGCGCCGGGGCCAGCCCCTCCACGA
CCCCCCCCAACCCGCACGTGTTCGCGCATGACTTCCTACCGCAACCTCCG
CCTCCCCCCTTCAGCGCGCCCATCCCCATCGCCAGCAAGCCCGGGGGAAT
CGCAGGCCTCTCGGACAGTCTGCACGACGGCTTCGCCTCCGCCTTGA back to top
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