EWM27762.1, cds2911 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27762.1 vs. NCBI_GenBank
Match: gi|585110039|gb|EWM27762.1| (udp-glucuronic acid decarboxylase 1 [Nannochloropsis gaditana]) HSP 1 Score: 426.017 bits (1094), Expect = 4.814e-151 Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0 Query: 1 MMYAYHNQSSVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRPKPCCSNVLSPSREYEDHLYAETMPAADETRLY 204 MMYAYHNQSSVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRPKPCCSNVLSPSREYEDHLYAETMPAADETRLY Sbjct: 1 MMYAYHNQSSVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRPKPCCSNVLSPSREYEDHLYAETMPAADETRLY 204
BLAST of EWM27762.1 vs. NCBI_GenBank
Match: gi|553190626|ref|XP_005855230.1| (UDP-glucuronate decarboxylase [Nannochloropsis gaditana CCMP526] >gi|422293832|gb|EKU21132.1| UDP-glucuronate decarboxylase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 417.157 bits (1071), Expect = 8.155e-143 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0 Query: 1 MMYAYHNQSSVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRPKPCCSNVLSPSREYEDHLYAETMPAAD 199 MMYAYHNQSSVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRPKPCCSNVLSPSREYEDHLYAETMPAAD Sbjct: 315 MMYAYHNQSSVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRPKPCCSNVLSPSREYEDHLYAETMPAAD 513
BLAST of EWM27762.1 vs. NCBI_GenBank
Match: gi|585111105|gb|EWM28682.1| (dtdp-glucose -dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 275.404 bits (703), Expect = 5.084e-92 Identity = 128/164 (78.05%), Postives = 147/164 (89.63%), Query Frame = 0 Query: 11 VDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRPKP 174 ++VRVARIFNTFGPRMHPNDGRVVSNFIIQALQGK+ITIYG+G QTRSFQYV+DLV+GL KLMNSDY LPVNLGNP+EY+VKDFALLV+ELV + S IVH+PATKDDPAKRKPDI +A LGW+P V VR+GL+KT+ YFR ELE+TGEI PTGP+A RP+P Sbjct: 1 MEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKNITIYGKGRQTRSFQYVDDLVSGLMKLMNSDYELPVNLGNPDEYSVKDFALLVRELVRNTDSQIVHLPATKDDPAKRKPDITIAKKELGWEPTVSVRDGLAKTIEYFRKELEETGEITPTGPEAARPQP 164
BLAST of EWM27762.1 vs. NCBI_GenBank
Match: gi|298708329|emb|CBJ48392.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 254.603 bits (649), Expect = 1.323e-79 Identity = 120/173 (69.36%), Postives = 142/173 (82.08%), Query Frame = 0 Query: 1 MMYAYHNQSSVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRPK 173 MMYAY NQ ++VRVARIFNTFGPRMHPNDGRVVSNFIIQA+QGKDITIYG+G QTRSFQYV+DLV GL LMN++Y PVN+GNP+EYTVKDFA L+K S S I+ M TKDDP KRKPDI +A LGW+P V V++GL +T+ YFR EL+ TGEI+PTGPDA++P+ Sbjct: 302 MMYAYENQGEMEVRVARIFNTFGPRMHPNDGRVVSNFIIQAIQGKDITIYGDGSQTRSFQYVDDLVRGLIALMNNNYSGPVNIGNPDEYTVKDFAELIKS-STESTSKIIFMDGTKDDPNKRKPDITLAKKELGWEPTVAVKDGLVETIKYFRGELKKTGEIIPTGPDASKPR 473
BLAST of EWM27762.1 vs. NCBI_GenBank
Match: gi|1072221110|gb|OEU05926.1| (putative bifunctional dTDP-glucose 4,6-dehydratase/UDP-glucuronate decarboxylase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 246.128 bits (627), Expect = 3.013e-78 Identity = 117/173 (67.63%), Postives = 141/173 (81.50%), Query Frame = 0 Query: 1 MMYAYHNQSSVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRPK 173 MMY+Y QS+V+VRVARIFNTFGPRMHPNDGRVVSNFIIQALQ K +TIYGEG QTRSFQYV DLV GL LMN DY PVNLGNP+E+T+K+FA VK+L S S I+ + T+DDP KRKPDI +A + LGW+PRV V+EGLSKT+ YF+ L++ GEI+PTGP A++P+ Sbjct: 153 MMYSYKEQSNVEVRVARIFNTFGPRMHPNDGRVVSNFIIQALQKKALTIYGEGDQTRSFQYVSDLVDGLHALMNGDYDGPVNLGNPDEFTMKEFAQYVKKL-TKSESDIIFLEKTQDDPNKRKPDISLAKEKLGWEPRVTVKEGLSKTITYFQQVLDEAGEIIPTGPGASKPQ 324
BLAST of EWM27762.1 vs. NCBI_GenBank
Match: gi|224005937|ref|XP_002291929.1| (dtdp-glucose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335] >gi|220972448|gb|EED90780.1| dtdp-glucose 4,6-dehydratase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 246.514 bits (628), Expect = 1.433e-77 Identity = 112/173 (64.74%), Postives = 137/173 (79.19%), Query Frame = 0 Query: 1 MMYAYHNQSSVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRPK 173 MMYAY NQ++V +R+ARIFNTFGPRMHPNDGRVVSNFIIQ+LQ KDITIYG+G QTRSFQYV+DL+ GL KLMN Y PVN+GNP+EY++KDFA ++++ S S I +P DDP++R+PDI A LGW P+V V EGL KT+ YF+ E+E GEIVPTGPDA +PK Sbjct: 212 MMYAYKNQNNVSIRIARIFNTFGPRMHPNDGRVVSNFIIQSLQNKDITIYGDGAQTRSFQYVDDLINGLVKLMNGSYDSPVNIGNPDEYSIKDFATKIRDM-TNSKSEIKFLPKVADDPSQREPDISTAKRELGWSPKVSVEEGLKKTIEYFKGEVESAGEIVPTGPDAVKPK 383
BLAST of EWM27762.1 vs. NCBI_GenBank
Match: gi|219130674|ref|XP_002185484.1| (nad-dependent epimerase/dehydratase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403015|gb|EEC42971.1| nad-dependent epimerase/dehydratase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 245.358 bits (625), Expect = 1.260e-75 Identity = 116/173 (67.05%), Postives = 139/173 (80.35%), Query Frame = 0 Query: 1 MMYAYHNQSSVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRPK 173 MMY+Y NQ+ VDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQ K++TIYGEG QTRSFQYV DLV GL LMN +Y LPVNLGNPEEY+VKDFA ++EL S S I+ +P ++DDP++R+PDI A LGW+P+V V++GL KT+ YF LE GEI+PTGP A +P+ Sbjct: 342 MMYSYKNQNGVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQNKNMTIYGEGKQTRSFQYVTDLVDGLYALMNGNYDLPVNLGNPEEYSVKDFATYIQEL-TKSTSDIIFLPKSEDDPSQRRPDITTAKRELGWEPQVKVQKGLEKTIEYFARVLESAGEIIPTGPGAAKPE 513
BLAST of EWM27762.1 vs. NCBI_GenBank
Match: gi|676390577|ref|XP_009038566.1| (hypothetical protein AURANDRAFT_28689 [Aureococcus anophagefferens] >gi|323450941|gb|EGB06820.1| hypothetical protein AURANDRAFT_28689 [Aureococcus anophagefferens]) HSP 1 Score: 234.572 bits (597), Expect = 2.299e-73 Identity = 115/175 (65.71%), Postives = 137/175 (78.29%), Query Frame = 0 Query: 1 MMYAYHNQSSVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDT-GEIVPTGPDATRPKP 174 MMY+Y+ Q V+VRVARIFNTFG RMHPNDGRVVSNFIIQALQ KDIT+YG+G QTRSFQ+V+DLV GL LMNS+Y LPVNLGNP+EYTV FA +K+L GS S IV +PAT DDP +RKPDI A +GWQP+ V GL++T+ YF+ EL D G I PTGP A++P+P Sbjct: 177 MMYSYNRQLGVEVRVARIFNTFGRRMHPNDGRVVSNFIIQALQNKDITLYGDGSQTRSFQFVDDLVDGLHALMNSNYSLPVNLGNPDEYTVAGFAETIKKL-TGSRSKIVRLPATTDDPRQRKPDITTAKTHIGWQPKWTVGRGLAETIEYFKRELADMGGSITPTGPLASKPRP 350
BLAST of EWM27762.1 vs. NCBI_GenBank
Match: gi|1072223642|gb|OEU08397.1| (putative dTDP-glucose 4,6-dehydratase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 231.491 bits (589), Expect = 1.907e-71 Identity = 110/175 (62.86%), Postives = 137/175 (78.29%), Query Frame = 0 Query: 1 MMYAYHNQSSVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGE--IVPTGPDATRPK 173 MMYAY Q++V+VR+ARIFNTFGPRMHPNDGRVVSNFIIQALQ KDITIYG+G+QTRSFQYV DLV GL KLMNSDY PVN+GNP+EY++K+FA +KE+ S S I+++P DDP +R PDI A L W P+ V+ GL+K V YF++ L+ G+ I PTGP+A++PK Sbjct: 241 MMYAYKEQNNVEVRIARIFNTFGPRMHPNDGRVVSNFIIQALQNKDITIYGDGNQTRSFQYVNDLVEGLVKLMNSDYDGPVNIGNPDEYSIKNFAEQIKEM-TSSQSKIIYLPKVADDPTQRNPDITTAKAKLNWSPQWHVKAGLAKAVEYFQAVLDMAGDDGIKPTGPEASKPK 414
BLAST of EWM27762.1 vs. NCBI_GenBank
Match: gi|1210530067|dbj|GAX11325.1| (UDP-glucuronate decarboxylase [Fistulifera solaris]) HSP 1 Score: 231.491 bits (589), Expect = 1.040e-70 Identity = 107/173 (61.85%), Postives = 133/173 (76.88%), Query Frame = 0 Query: 1 MMYAYHNQSSVDVRVARIFNTFGPRMHPNDGRVVSNFIIQALQGKDITIYGEGHQTRSFQYVEDLVTGLTKLMNSDYGLPVNLGNPEEYTVKDFALLVKELVVGSPSAIVHMPATKDDPAKRKPDIRVAMDVLGWQPRVPVREGLSKTVAYFRSELEDTGEIVPTGPDATRPK 173 MMY+Y Q+ +D+RVARIFNTFGPRMHPNDGRVVSNFII+ALQ KD+TIYG+G QTRSFQYV DLV GL LMN+DY PVNLGNP E+T+ +FA V+ L S S I+ +P + DDP +R+PDI+ A L W+P+V V EGL KT+ YF + L + GEI+PTGP A +P+ Sbjct: 309 MMYSYQKQNGLDIRVARIFNTFGPRMHPNDGRVVSNFIIEALQNKDMTIYGDGKQTRSFQYVSDLVDGLHALMNNDYTQPVNLGNPSEWTIAEFAEHVQALTKSS-SQIIKLPKSTDDPQQRRPDIQTAKRELDWEPKVSVDEGLKKTIEYFAAVLREAGEIIPTGPGAAKPE 480 The following BLAST results are available for this feature:
BLAST of EWM27762.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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