EWM27765.1, cds2909 (CDS) Nannochloropsis gaditana

Overview
NameEWM27765.1
Unique Namecds2909
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002460.1:267471..268094 -

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Properties
Property NameValue
Protein idEWM27765.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100705g1.4006.mrna
GbkeyCDS
End range.
End range268094
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002460.1supercontigCM002460.1:267471..268094 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27765.1 vs. NCBI_GenBank
Match: gi|585110043|gb|EWM27765.1| (hypothetical protein Naga_100705g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 427.557 bits (1098), Expect = 1.305e-151
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0 
Query:    1 SSTTLNSMTQPTLQASAMEVAEVLGLRVTSGTLNELFNLELLLYPWQHNEADEDLPVVLLFEGRGHFFTNDLGRFTGDAEFRRFIVQYHADRLHKFKAVAQITVWDWRNAKTPRKKLHLIRNVLRMRGLDPAVYIPPSAPIEKQGFSEGEGDVKDKILKGAGPVDGEVIHLRGHPEPQGGLHRGPDFQQQNTGGGSSRNALAPSTNI 207
            SSTTLNSMTQPTLQASAMEVAEVLGLRVTSGTLNELFNLELLLYPWQHNEADEDLPVVLLFEGRGHFFTNDLGRFTGDAEFRRFIVQYHADRLHKFKAVAQITVWDWRNAKTPRKKLHLIRNVLRMRGLDPAVYIPPSAPIEKQGFSEGEGDVKDKILKGAGPVDGEVIHLRGHPEPQGGLHRGPDFQQQNTGGGSSRNALAPSTNI
Sbjct:    1 SSTTLNSMTQPTLQASAMEVAEVLGLRVTSGTLNELFNLELLLYPWQHNEADEDLPVVLLFEGRGHFFTNDLGRFTGDAEFRRFIVQYHADRLHKFKAVAQITVWDWRNAKTPRKKLHLIRNVLRMRGLDPAVYIPPSAPIEKQGFSEGEGDVKDKILKGAGPVDGEVIHLRGHPEPQGGLHRGPDFQQQNTGGGSSRNALAPSTNI 207
The following BLAST results are available for this feature:
BLAST of EWM27765.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110043|gb|EWM27765.1|1.305e-151100.00hypothetical protein Naga_100705g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2917rna2917Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications