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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101186g2.2362.mrna |
| Orig protein id | gnl|cribi|Naga_101186g2.2362 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002460.1 | supercontig | CM002460.1:116317..117695 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2870 ID=rna2870|Name=rna2870|organism=Nannochloropsis gaditana|type=mRNA|length=1035bp
ATGGTGCGAAAGCGAGGACGATGGCGTCAAGCGGTGGGTATACGGACGCA
CCCAAACGGGAATCGGGAAGTAGGGAGCCAGGGAGGTGCAGAGGGAGCGC
CTAGCGTGATGGTACCTTCCAAAGAATGGGCTCAGGGGAAGATAGTAGTA
ATTGAGATGCATGAAAGAGTTGTAGGAAATGGCAAGCACAGATCCAGAAA
GATGCAAGAGCGCGAAAGGCATCAAATGAAGAAAAAGGCTTCCCTTTACC
TTGTGTCGCGCTCCTGGTGTTCTCTCGGCCGTCAAGTGATTCGAATGTTC
TACATGTTTAAAGCTTCTTCGACGCCATGCGACAGGTTTCAGTGTATGAA
AATGCCCGATGCATGTGACCCCTATATTCTTACGATTACGGGGGACAAAA
TAACGTATCCCCGCCGCTCCCAGAAAATTTTCCTCACATTCCAAAGTCCA
CTCACTTTTCGTACAATCGTGCTGTACGACAGCAGCTTCGGGGTAGACAT
GATGGAGCAAGATCATGCGCACGCAGAGCAGCGGGAGGAGAAAAGTGCGG
TGGAAGCGTCTTCAAACGGCACAGCCTTGTCCTCCGCGTCGGAGCGCACG
ACATCAAATCCCAAGACCCCCTCCTCCTTCCTTTCTTACGCCCCCCGTGA
CGCCTCAGAGGGCTTGGCAGAGGGACTGAAATCCATCGCCCTCGGCGTCG
GCGCGGGCGTTGCAGGCTTAGTGGCCATGCCCGTGGTTGGAGCGAGGGAG
AAAGGCGTGTCGGGGTTCTTCAAAGGGCTTGGGCAAGGCGTCCTAGGGGC
CGTGGTCCTTCCGACTGTGGGGGTCGTGAATGGCGTGGTGGAGATAGGGG
CGGGCATTGTGAATACACCAGAGAGTGTGAATGCCCGAATGGAAGGGCGG
TCTTGGGACGAGAAACAGCGGAAATGGATCCGTGGAGGCGACAGCCACAG
GGGAAGAGATCAAGAAAGCGTACTACAAGAAGGCTCGGGCCTGCCATCCG
GATCGCCACCCGGGGGATGCCGAGGCGCACGGTAG back to topprotein sequence of rna2870 >rna2870-protein ID=rna2870-protein|Name=rna2870|organism=Nannochloropsis gaditana|type=polypeptide|length=421bp
MAATSSLTEEQEILAELAEELGSLSSGAPSPLGGPVSSARIPNHTAVEDS
TNGNHVISGHSNGSNDDEDDEDGGSLLLPPPSLEGPADTGDLHDLEDPLL
TTERKSEDESAFPFHPPASSGVRLLDDVEGVDGEGGHKEEDEKGLQVLGD
LPESGIGRGKDEALLASKGKATVPEVPQRMITMSLRPPRQRRRYDGFATS
LQGKEEEEEGEGEGEEGEEGRGGSRARRNGQPVRGETSSAAVRGGRSGGG
VGRGSGVSRSNSVSSSGSSNSGGMHLTQQPFNSAVCKKRLYGPGRGRWKR
RRFDGNGFIDDYTSEVSTPAPPSLPPSLPPSLRPSLLSFLPATSRFLRRA
PCHLCIFCRPPFLPPFLPPCLPSLLPPCSFFSDGLFPPLPPPSLPPSSPL
SPRSSASFKPGPAVLRRDLRR back to topmRNA from alignment at CM002460.1:116317..117695+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2870 ID=rna2870|Name=rna2870|organism=Nannochloropsis gaditana|type=mRNA|length=1379bp|location=Sequence derived from alignment at CM002460.1:116317..117695+ (Nannochloropsis gaditana)
GCTTCGTTTTGAACACGCGCAACGGGCCCACCTCTTCTTTTGCTAGtatc
ctctttcttttgttCCCACTGTCAACTTCACATCCACCTTACGTCAGTGC
ACAGAAGAGTCCTTGAAATGGCCGCAACATCGTCTTTAACCGAAGAACAA
GAGATTTTAGCCGAGCTCGCAGAAGAATTGGGTTCGCTTTCCTCAGGTGC
CCCATCGCCTTTGGGAGGGCCCGTGTCGAGTGCGAGAATACCGAACCAca
cggccgtggaggacagcACCAATGGCAACCACGTGATAAGCGGACACTCA
AATGGTAGTAatgatgacgaggacgatgaagatggcGGGAGccttctgct
tcctccgccgtcctTGGAAGGGCCTGCCGACACGGGCGACCTTCACGACC
TGGAAGACCCACTTCTGACGACGGagaggaaaagcgaggatgaaagcgcc
ttccccttccacccgcCCGCATCGTCTGGTGTGAGGCTCTTGGATGACGT
GGAAGGAGTggacggtgagggagggcacaaggaagaggatgagaaagggC
TCCAAGTGTTGGGTGACCTCCCGGAGAGTGGGATAGGACGGGGCAAAGAT
GAAGCATTGCTGGCATCCAAAGGCAAAGCCACCGTGCCAGAAGTCCCGCA
ACGCATGATAACCATGTCCTTACGGCCTCCTCGGCAACGGCGGCGGTACG
ACGGCTTCGCTACCTCGttgcaggggaaggaagaggaggaggaaggggag
ggcgagggggaggaaggggaggaagggaggggcgggagccgCGCGCGTCG
AAACGGGCAGCCTGTCCGGGGCGAAACATCGTCCGCAGCGGttaggggag
ggcgaagtgGTGGGGGCGTGGGCCGTGGATCGGGAGTGAGTCGAAGCAAC
AGTGTGAGTAGCAGCGGGAGCAGCAATAGCGGAGGCATGCATTTGACCCA
GCAACCCTTCAATTCCGCCGTCTGTAAAAAACGTCTGTACGGCCCAGGAC
GAGGCCGGTGGAAGCGTCGACGCTTCGATGGCAACGGTTTCATTGACGAT
TACACCTCGGAAGTCAGtactcccgcccctccctccctccctccctccct
ccctccctccctccgcccctccctgctttcttttcttcctgccACTTCCC
GTTTTCTCCGTCGTGCTCCTTGTCACCTGTGTATAttctgtcgccctccc
ttcctccctcccttcctccctccctgcctcccttccctcctccctccctg
cagcttcttttccgacggccttttccctcccctcccccctccctccctcc
ctccctcgtcccctctctcccccaggtcctccgcctccttcaaaCCCGGG
CCCGCTGTCCTTCGACGAGATCTACGACG back to topCoding sequence (CDS) from alignment at CM002460.1:116317..117695+ >rna2870 ID=rna2870|Name=rna2870|organism=Nannochloropsis gaditana|type=CDS|length=1262bp|location=Sequence derived from alignment at CM002460.1:116317..117695+ (Nannochloropsis gaditana)
ATGGCCGCAACATCGTCTTTAACCGAAGAACAAGAGATTTTAGCCGAGCT
CGCAGAAGAATTGGGTTCGCTTTCCTCAGGTGCCCCATCGCCTTTGGGAG
GGCCCGTGTCGAGTGCGAGAATACCGAACCAcacggccgtggaggacagc
ACCAATGGCAACCACGTGATAAGCGGACACTCAAATGGTAGTAatgatga
cgaggacgatgaagatggcGGGAGccttctgcttcctccgccgtcctTGG
AAGGGCCTGCCGACACGGGCGACCTTCACGACCTGGAAGACCCACTTCTG
ACGACGGagaggaaaagcgaggatgaaagcgccttccccttccacccgcC
CGCATCGTCTGGTGTGAGGCTCTTGGATGACGTGGAAGGAGTggacggtg
agggagggcacaaggaagaggatgagaaagggCTCCAAGTGTTGGGTGAC
CTCCCGGAGAGTGGGATAGGACGGGGCAAAGATGAAGCATTGCTGGCATC
CAAAGGCAAAGCCACCGTGCCAGAAGTCCCGCAACGCATGATAACCATGT
CCTTACGGCCTCCTCGGCAACGGCGGCGGTACGACGGCTTCGCTACCTCG
ttgcaggggaaggaagaggaggaggaaggggagggcgagggggaggaagg
ggaggaagggaggggcgggagccgCGCGCGTCGAAACGGGCAGCCTGTCC
GGGGCGAAACATCGTCCGCAGCGGttaggggagggcgaagtgGTGGGGGC
GTGGGCCGTGGATCGGGAGTGAGTCGAAGCAACAGTGTGAGTAGCAGCGG
GAGCAGCAATAGCGGAGGCATGCATTTGACCCAGCAACCCTTCAATTCCG
CCGTCTGTAAAAAACGTCTGTACGGCCCAGGACGAGGCCGGTGGAAGCGT
CGACGCTTCGATGGCAACGGTTTCATTGACGATTACACCTCGGAAGTCAG
tactcccgcccctccctccctccctccctccctccctccctccctccgcc
cctccctgctttcttttcttcctgccACTTCCCGTTTTCTCCGTCGTGCT
CCTTGTCACCTGTGTATAttctgtcgccctcccttcctccctcccttcct
ccctccctgcctcccttccctcctccctccctgcagcttcttttccgacg
gccttttccctcccctcccccctccctccctccctccctcgtcccctctc
tcccccaggtcctccgcctccttcaaaCCCGGGCCCGCTGTCCTTCGACG
AGATCTACGACG back to top
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