EWM27839.1, cds2842 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27839.1 vs. NCBI_GenBank
Match: gi|585110163|gb|EWM27839.1| (flap endonuclease-1 [Nannochloropsis gaditana]) HSP 1 Score: 948.732 bits (2451), Expect = 0.000e+0 Identity = 465/465 (100.00%), Postives = 465/465 (100.00%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAASQLTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAKIGKVYAVATEDTDTLTFATPRLLRNMTSAGDNPIKEIDYKKMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEWLPRIKVRKPSSLPPSAPPSVSPVEEGDKAMPGDENACKTAEVDSKAGMEGEKEEGIKAAAIVAREVAPDEPAKSVEGEVMEMPAYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQQKRLDSFFKPSGSSSTSSTTLKRKEAPAAAKGKGKAKFGGKKK 465 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAASQLTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAKIGKVYAVATEDTDTLTFATPRLLRNMTSAGDNPIKEIDYKKMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEWLPRIKVRKPSSLPPSAPPSVSPVEEGDKAMPGDENACKTAEVDSKAGMEGEKEEGIKAAAIVAREVAPDEPAKSVEGEVMEMPAYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQQKRLDSFFKPSGSSSTSSTTLKRKEAPAAAKGKGKAKFGGKKK Sbjct: 1 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAASQLTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAKIGKVYAVATEDTDTLTFATPRLLRNMTSAGDNPIKEIDYKKMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEWLPRIKVRKPSSLPPSAPPSVSPVEEGDKAMPGDENACKTAEVDSKAGMEGEKEEGIKAAAIVAREVAPDEPAKSVEGEVMEMPAYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQQKRLDSFFKPSGSSSTSSTTLKRKEAPAAAKGKGKAKFGGKKK 465
BLAST of EWM27839.1 vs. NCBI_GenBank
Match: gi|298706804|emb|CBJ29727.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 426.017 bits (1094), Expect = 1.385e-142 Identity = 231/448 (51.56%), Postives = 297/448 (66.29%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAASQ-LTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAKIGKVYAVATEDTDTLTFATPRLLRNMTSAGDN-PIKEIDYKKMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEWL---PRIKVRKPSSLPPSAPPSVSPVEEGD-KAMPGDENACKTAEVDSKAG-MEGEK------EEGI----KAAAIVAREVAPDEPAKSVEGEVMEM-PAYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQQKRLDSFF 430 MGI GLTKL++DEAP +KE ++ GR VAVDASMA+YQFLIA+R SGG SQ LTNEAGEVTSHIQG+FNRTIRML+ G+KP ++FDGKPP LKGGEL KR KR KAE+ELK A E + + D+ SKRLVR + + DCKKLL LMGVP + AP EAEAQCAALA+ G VY ATED D LTF TP+LLR MT +G N PI E+DY+K+L+GL L+H +F+DLC+L GCDYT +I+GIGPK AL L++++G IE +++++ KY VP +WL R + RK + A EE KA + A +V K G + +K + G+ +AA + A+ E A E E+ + P Y AR LF++PE+ E KW +P+E GL FL++ GFN +RV SGI KLK +R + QKR+DSFF Sbjct: 1 MGIHGLTKLLSDEAPNCMKEVDLDSLTGRKVAVDASMAMYQFLIAVR--SGGEGQSQMLTNEAGEVTSHIQGMFNRTIRMLSKGVKPCYIFDGKPPQLKGGELAKRTAKRAKAEAELKVATEADDKNDVDKFSKRLVRVTRDHNEDCKKLLSLMGVPVVTAPSEAEAQCAALAREGVVYGTATEDMDALTFQTPKLLRRMTFSGSNQPILEVDYQKLLQGLELSHEKFVDLCVLCGCDYTGSIKGIGPKKALALVRQHGTIEEIIKHLDAKKYPVPDDWLEPAERAERRKQARQEAKARKEARAKEEAKVKAETANPEAVSEEDVQQKEGDSDSDKAKADTPDHGVSVAKEAADVSAKRERETEDAAESEQEMDDTPPMYRQARGLFLKPEVEPAGEYKLKWTDPDEPGLIKFLVEEKGFNAERVASGIVKLKGARKNVSQKRMDSFF 446
BLAST of EWM27839.1 vs. NCBI_GenBank
Match: gi|219125938|ref|XP_002183226.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|317374908|sp|B7G7Y7.1|FEN1_PHATC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap structure-specific endonuclease 1 >gi|217405501|gb|EEC45444.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 407.912 bits (1047), Expect = 3.050e-136 Identity = 214/434 (49.31%), Postives = 286/434 (65.90%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAASQLTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAKIGKVYAVATEDTDTLTFATPRLLRNMT--SAGDNPIKEIDYKKMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEWLPRIKVRKPSSLPPSAPPSVSPVEEGDKAMPGDENACKTAEVDSKAGMEGEKEEGIKAAAIVAREVAPDEPAKSVEGEVMEMPAYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQ--QKRLDSFF 430 MGIKGL KL++DEAP+ I+E +++ +GR +A+DASMAIYQFLIA+R G A+ LTN GE TSHIQG+FNRTIR + GI+PVFVFDGKPP +K EL KRREKREKA++ L A EE NVEEQD+QSKRLVRAG KE+ DC+KLL LMGVP + APCEAEAQ AAL K G VYA TED D LTFATP L+R +T +A + ++ ++Y K++EGL ++H QF+DLCI++GCDY IRG+GPK+AL LI+++G+IE V+E I + K+ VP W+P K ++D+++ + + EEG+++ + +E V+ E + +PAYV AR LF + E+ + EL KW L+ FL+D +GFN DRVK+ I KL+A+ A Q R+DSFF Sbjct: 1 MGIKGLAKLLSDEAPDCIREVELKSLHGRKIAIDASMAIYQFLIAVRSGGPNQQATMLTNAEGETTSHIQGMFNRTIRYMTEGIRPVFVFDGKPPDVKSHELIKRREKREKAQAALAVASEEGNVEEQDKQSKRLVRAGTKENEDCRKLLTLMGVPVVTAPCEAEAQAAALCKAGLVYATGTEDMDALTFATPILVRKLTFANASKSMVQTMNYNKVIEGLAISHDQFVDLCIMLGCDYCDTIRGVGPKTALKLIREHGNIEKVIETIDRKKFVVPESWVPNEK-----------------------------------KLDAQS--DDDDEEGVESP-------SKEENNGIVDTEEL-IPAYVQARKLFNEHEVLNDIEL--KWKPCQAEDLQKFLVDDMGFNVDRVKNNIEKLQAAYKANSKPQTRMDSFF 387
BLAST of EWM27839.1 vs. NCBI_GenBank
Match: gi|1210518933|dbj|GAX22215.1| (flap endonuclease-1 [Fistulifera solaris]) HSP 1 Score: 382.489 bits (981), Expect = 1.822e-126 Identity = 230/470 (48.94%), Postives = 294/470 (62.55%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAAS-QLTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAKIGKVYAVATEDTDTLTFATPRLLRNMT--SAGDNPIKEIDYKKMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEWLPRIKVRKPSSLPPSAPPSVSPVEEGDKAMPGDENACKTAEVDSKAGMEGEKEEGIKAAAIVAREVAPDEPAKSVEGEVMEMPAYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQ--QKRLDSFFKPSGSSSTSSTTLKRKEAPAAAKGKGKAKFGGKKK 465 MGIKGL KLI+DEAP+AI+E +++ +GR +A+DASMAIYQFLIA+R +GG S LTN GE TSHIQG+FNRTIR + GIKPVFVFDGKPP +K GEL KRREKREKA+ L+ A EE NVEEQD+ SKRLVRAG+KE+ DC+KLL LMGVP + APCEAEAQ AALAK G VYA TED D LTF TP L+R MT SA + ++ ++Y K LEG+ LT AQF+DLCI++GCDY I+G+GPK+AL LI+++G IE++L+++ KY VP WLP P +E +++ EN SV ++ +PAYV+AR +F + E+ A+L KW L FL+D +GFNPDRV S I KL+A+ A + Q R+D+FF T + ++KRK P KGKG KKK Sbjct: 1 MGIKGLAKLISDEAPDAIREVELKSLHGRKIAIDASMAIYQFLIAVRSNNGGQGQSFMLTNAEGETTSHIQGMFNRTIRYMTEGIKPVFVFDGKPPEVKSGELLKRREKREKAQLALQVATEEGNVEEQDKHSKRLVRAGQKENDDCQKLLRLMGVPVVLAPCEAEAQAAALAKAGLVYAAGTEDMDALTFQTPVLVRKMTFASASKSMVQTMNYAKALEGMNLTQAQFVDLCIMLGCDYCDTIKGVGPKTALKLIREHGCIENILKHLDGKKYVVPESWLP-------------------PPKEAEESSSDQEN--------------------------------------SVSDDLQPIPAYVLARRMFNEHEVLMHADL--KWKPCEREALTKFLVDEMGFNPDRVASSIDKLEAAYKANKAPQTRMDAFFAVQPKKPTDA-SVKRKIEP-VVKGKGAKGPAAKKK 409
BLAST of EWM27839.1 vs. NCBI_GenBank
Match: gi|1210521704|dbj|GAX19694.1| (flap endonuclease-1 [Fistulifera solaris]) HSP 1 Score: 375.941 bits (964), Expect = 5.518e-124 Identity = 232/470 (49.36%), Postives = 293/470 (62.34%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAAS-QLTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAKIGKVYAVATEDTDTLTFATPRLLRNMT--SAGDNPIKEIDYKKMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEWLPRIKVRKPSSLPPSAPPSVSPVEEGDKAMPGDENACKTAEVDSKAGMEGEKEEGIKAAAIVAREVAPDEPAKSVEGEVMEMPAYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQ--QKRLDSFFKPSGSSSTSSTTLKRKEAPAAAKGKGKAKFGGKKK 465 MGIKGL KLI+DEAP+AI+E +++ +GR +A+DASMAIYQFLIA+R +GG S LTN GE TSHIQG+FNRTIR + GIKPVFVFDGKPP +K GEL KRREKREKA+ L+ A EE NVEEQD+ SKRLVRAG+KE+ DC+KLL+LMGVP + APCEAEAQ AALAK G VYA TED D LTF TP L+R MT SA + ++ ++Y K LEG+ LT AQF+DLCI++GCDY I+G+GPK+AL LI+++G IE++L+++ KY VP W LPP A AE D + SV + +PAYV+AR +F + E+ AEL +K E E L FL+ +GFNPDRV S I KL+A+ A + Q R+D+FF T + ++KRK P KGKG KKK Sbjct: 1 MGIKGLAKLISDEAPDAIREVELKSLHGRKIAIDASMAIYQFLIAVRSNNGGQGQSFMLTNAEGETTSHIQGMFNRTIRYMTEGIKPVFVFDGKPPEVKSGELLKRREKREKAQLALQVATEEGNVEEQDKHSKRLVRAGQKENDDCQKLLKLMGVPVVLAPCEAEAQAAALAKAGLVYAAGTEDMDALTFQTPVLVRKMTFASASKSMVQTMNYAKALEGMNLTQAQFVDLCIMLGCDYCDTIKGVGPKTALKLIREHGCIENILKHLDGKKYVVPESW-----------LPPPA----------------------EAESDQE---------------------------NSVSDDHQPIPAYVLARRMFNEHEVLTHAELKWKPCEREE--LTKFLVGEMGFNPDRVASSIDKLEAAYKANKAPQTRMDAFFAVQPKKPTDA-SVKRKVEP-VVKGKGAKGPAAKKK 406
BLAST of EWM27839.1 vs. NCBI_GenBank
Match: gi|397621116|gb|EJK66115.1| (hypothetical protein THAOC_12982 [Thalassiosira oceanica]) HSP 1 Score: 364.385 bits (934), Expect = 5.374e-119 Identity = 219/434 (50.46%), Postives = 280/434 (64.52%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAASQLTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAKIGKVYAVATEDTDTLTFATPRLLRNMT--SAGDNPIKEIDYKKMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEWLPRIKVRKPSSLPPSAPPSVSPVEEGDKAMPGDENACKTAEVDSKAGMEGEKEEGIKAAAIVAREVAPDEPAKSVEGEVMEMPAYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQ--QKRLDSFF 430 MGIKGL KL++DEAP++I+E + +GR +AVDASMAIYQ LIAIR G+ AA+ LTN GE TSHIQG+FNRTI+ + GI+PV+VFDGKPP+ K GEL KRREKR+KAE LK A+E +VEEQD+ +KRLVRAG KE+ D K+LL LMGVP + APCEAEAQ AALAK GKVYA ATED D LTF TP +R MT A I+E++Y K L GLGL H QF+DLCIL+GCDY I+GIGPK+AL LIK++ +IE +L+ +++ KY VP + P + RK E+GD +N TA+ K EGE++E I +P YV AR LF E+ +E+ KW + L+AFL+D +GFNP+RV+S I KL+ + + Q R+DSFF Sbjct: 1 MGIKGLAKLLSDEAPDSIREVPLSSLHGRKIAVDASMAIYQMLIAIRSGNPNMAATVLTNADGETTSHIQGIFNRTIKFITEGIRPVYVFDGKPPSFKSGELLKRREKRQKAEEALKAAEESGDVEEQDKHTKRLVRAGHKENEDIKRLLTLMGVPIINAPCEAEAQAAALAKAGKVYATATEDMDALTFQTPIQVRKMTFAKASQAEIQEVNYSKALIGLGLNHDQFVDLCILLGCDYCDTIKGIGPKTALKLIKEHNNIETILKTLNREKYTVPESYEPNVAARKRQL-----------EEDGDS-----DNEDATAKT-GKPKTEGEEDEEI-------------------------LPVYVEARKLFNSHEVLPDSEIELKWKDCQPEQLKAFLVDEMGFNPERVQSNIEKLQKAHKTSKKPQMRMDSFF 392
BLAST of EWM27839.1 vs. NCBI_GenBank
Match: gi|553181073|ref|XP_005853508.1| (flap endonuclease-1 [Nannochloropsis gaditana CCMP526] >gi|422295551|gb|EKU22850.1| flap endonuclease-1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 352.058 bits (902), Expect = 7.242e-118 Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAASQLTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAK 173 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAASQLTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAK Sbjct: 1 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAASQLTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAK 173
BLAST of EWM27839.1 vs. NCBI_GenBank
Match: gi|1072235301|gb|OEU20030.1| (PIN domain-like protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 350.132 bits (897), Expect = 3.793e-114 Identity = 176/284 (61.97%), Postives = 210/284 (73.94%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAASQLTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAKIGKVYAVATEDTDTLTFATPRLLRNMTSAGDNP----IKEIDYKKMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEWLPR 280 MGIKGL KL++DEAP+ I+E + + +GR VA+DASMAIYQFLIA+R G A LTN GE TSHIQG+FNRTIR L G+KPVFVFDGK P +K GEL+KRREKR+KAE ELKKA ++ NVEE D+ SKRL RAG+KE+ DCKKLL LMGVP + AP EAEAQ AAL K G VYA TED D LTFATP L+R MT A I++++YKK +EGL LTH QF+DLCILMGCDY I+GIGPK+AL LIK++G IE ++ + K VP L R Sbjct: 1 MGIKGLAKLLSDEAPDCIREVEFKSLHGRKVAIDASMAIYQFLIAVRSGGPNQQAMMLTNADGETTSHIQGMFNRTIRFLTEGMKPVFVFDGKAPQMKSGELEKRREKRKKAEEELKKAADDDNVEEMDKHSKRLARAGRKENEDCKKLLRLMGVPVVVAPMEAEAQAAALCKAGLVYATGTEDMDALTFATPILIRKMTFANQAAKGAKIQQMNYKKAVEGLELTHEQFVDLCILMGCDYCDTIKGIGPKTALKLIKEHGSIEKIIPALQDEK-PVPAYVLAR 283 HSP 2 Score: 65.0846 bits (157), Expect = 8.373e-8 Identity = 34/74 (45.95%), Postives = 44/74 (59.46%), Query Frame = 0 Query: 359 MPAYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQ--QKRLDSFF 430 +PAYV+AR LF E+ EL KW P + L FL++ GFN DRVK+ I KL + A + Q R+DSFF Sbjct: 276 VPAYVLARELFFNHEVDTDVEL--KWTAPKKEELTKFLVEEAGFNADRVKASIEKLDKAHTANRKPQARMDSFF 347
BLAST of EWM27839.1 vs. NCBI_GenBank
Match: gi|699255179|ref|XP_009861628.1| (PREDICTED: flap endonuclease 1 [Ciona intestinalis]) HSP 1 Score: 344.354 bits (882), Expect = 6.008e-112 Identity = 167/280 (59.64%), Postives = 210/280 (75.00%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAASQLTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAKIGKVYAVATEDTDTLTFATPRLLRNMT--SAGDNPIKEIDYKKMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEWL 278 MGI GL+KLI D+AP A+KE+++++Y GR VA+DASMA+YQFLIAIR +QLTNE GEVTSHI GLF RTIR+L +GIKPVFVFDGKPP +K GEL KR E+RE+AE EL KAQE + ++ S+RLV+ ++ DCKKLL LMG+P +EAP EAEAQCA+L K GKVYA ATED D LTF + RLLR++T A PI+E Y+K+LE + +TH QF+DLCIL+GCDY +IRG+GPK A LIK+Y I+ +L+NI KY VP W+ Sbjct: 1 MGILGLSKLICDKAPSAVKENEIKNYFGRKVAIDASMAVYQFLIAIRQD-----GNQLTNEDGEVTSHIAGLFYRTIRLLGNGIKPVFVFDGKPPQMKSGELAKRAERREQAEKELAKAQESGEAADVEKYSRRLVKVTREHMDDCKKLLRLMGIPVVEAPTEAEAQCASLVKSGKVYATATEDMDALTFHSSRLLRHLTFSEARKMPIQEFVYEKVLEEMEMTHEQFVDLCILLGCDYCEHIRGVGPKRAYDLIKQYRSIDEILKNIDLKKYTVPDGWV 275 HSP 2 Score: 75.8702 bits (185), Expect = 2.893e-11 Identity = 43/129 (33.33%), Postives = 69/129 (53.49%), Query Frame = 0 Query: 334 KAAAIVAREVAPDEPAKSVEGEVMEMP---AYVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQQKRLDSFFK-----PSGSSSTSSTTLKRKEAPAAAKG 454 +A ++ + + DE K+++ + +P Y AR LF+ P++ ++ KW +P+E G+ F+++ GFN DRV+SGI K+ +R Q RLD FFK P S T +K + A AKG Sbjct: 245 RAYDLIKQYRSIDEILKNIDLKKYTVPDGWVYKDARQLFLAPDVAASEDVELKWNDPDEEGIVKFMVEEKGFNEDRVRSGIKKILQNRQKSTQGRLDDFFKVLPSTPKTKKRKSDTKIKSESAKKRAKG 373
BLAST of EWM27839.1 vs. NCBI_GenBank
Match: gi|1036551479|ref|NP_001315436.1| (flap endonuclease 1 [Danio rerio] >gi|1040680401|ref|XP_017209293.1| flap endonuclease 1 isoform X1 [Danio rerio] >gi|82187497|sp|Q6TNU4.1|FEN1A_DANRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap structure-specific endonuclease 1 >gi|37362214|gb|AAQ91235.1| flap structure-specific endonuclease 1 [Danio rerio] >gi|47940409|gb|AAH71488.1| Fen1 protein [Danio rerio]) HSP 1 Score: 342.043 bits (876), Expect = 4.420e-111 Identity = 167/280 (59.64%), Postives = 205/280 (73.21%), Query Frame = 0 Query: 1 MGIKGLTKLIADEAPEAIKEHKVEHYNGRTVAVDASMAIYQFLIAIRHGSGGAAASQLTNEAGEVTSHIQGLFNRTIRMLASGIKPVFVFDGKPPTLKGGELDKRREKREKAESELKKAQEEANVEEQDRQSKRLVRAGKKESADCKKLLELMGVPWLEAPCEAEAQCAALAKIGKVYAVATEDTDTLTFATPRLLRNMTS--AGDNPIKEIDYKKMLEGLGLTHAQFIDLCILMGCDYTSNIRGIGPKSALTLIKKYGDIEHVLENISKGKYQVPPEWL 278 MGI GL KLIAD AP AIKEH+++ Y GR +A+DASM IYQFLIA+R + L NE GE TSH+ G+F RTIRML SGIKPV+VFDGKPP LK GEL+KR E+R +AE L +AQE E D+ SKRLV+ K+ + +CKKLL LMGVP++EAPCEAEA CAAL K GKVYA ATED D LTF T LLR++T+ A PI+E + ++L+ + LTH QFIDLCIL+GCDY I+GIGPK A+ LIK++G IE +LENI K+ P +WL Sbjct: 1 MGIHGLAKLIADHAPSAIKEHEIKSYFGRKIAIDASMCIYQFLIAVRQD-----GNVLQNEDGETTSHLMGMFYRTIRMLESGIKPVYVFDGKPPQLKSGELEKRVERRAEAEKLLAQAQEAGEQENIDKFSKRLVKVTKQHNEECKKLLSLMGVPYIEAPCEAEASCAALVKAGKVYATATEDMDGLTFGTTVLLRHLTASEAKKLPIQEFHFSRILQDMELTHQQFIDLCILLGCDYCGTIKGIGPKRAIDLIKQHGSIEEILENIDPNKHPAPEDWL 275 HSP 2 Score: 72.7886 bits (177), Expect = 2.479e-10 Identity = 39/98 (39.80%), Postives = 54/98 (55.10%), Query Frame = 0 Query: 362 YVMARALFVQPEIHDPAELNFKWVEPNEAGLEAFLIDSLGFNPDRVKSGIAKLKASRGAMQQKRLDSFFKPSGSSSTSSTTLKRKEAPAAAKGKGKAK 459 Y AR LF++PE+ D ++ KW EP+E GL F+ F+ DR+++G K+ SR Q RLD+FF +GS S+ KRKE K K K Sbjct: 276 YKEARGLFLEPEVVDGTSVDLKWNEPDEDGLIQFMCAEKQFSEDRIRNGCKKITKSRQGSTQGRLDTFFTVTGSISS-----KRKEPETKGSAKKKQK 368 The following BLAST results are available for this feature:
BLAST of EWM27839.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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