EWM27858.1, cds2816 (CDS) Nannochloropsis gaditana

Overview
NameEWM27858.1
Unique Namecds2816
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1335696..1336053 +
Alignment locationCM002459.1:1336163..1336273 +
Alignment locationCM002459.1:1336428..1336525 +
Alignment locationCM002459.1:1336638..1336760 +
Alignment locationCM002459.1:1337042..1337161 +
Alignment locationCM002459.1:1337314..1337410 +
Alignment locationCM002459.1:1337482..1337544 +
Alignment locationCM002459.1:1337615..1337700 +
Alignment locationCM002459.1:1337906..1337999 +
Alignment locationCM002459.1:1338122..1338216 +
Alignment locationCM002459.1:1338376..1338456 +
Alignment locationCM002459.1:1338603..1338872 +
Alignment locationCM002459.1:1339027..1339542 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27858.1
Productmajor facilitator superfamily mfs_1
Orig transcript idgnl|cribi|Naga_100219g5.2199.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1335696..1336053 +
CM002459.1supercontigCM002459.1:1336163..1336273 +
CM002459.1supercontigCM002459.1:1336428..1336525 +
CM002459.1supercontigCM002459.1:1336638..1336760 +
CM002459.1supercontigCM002459.1:1337042..1337161 +
CM002459.1supercontigCM002459.1:1337314..1337410 +
CM002459.1supercontigCM002459.1:1337482..1337544 +
CM002459.1supercontigCM002459.1:1337615..1337700 +
CM002459.1supercontigCM002459.1:1337906..1337999 +
CM002459.1supercontigCM002459.1:1338122..1338216 +
CM002459.1supercontigCM002459.1:1338376..1338456 +
CM002459.1supercontigCM002459.1:1338603..1338872 +
CM002459.1supercontigCM002459.1:1339027..1339542 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
IPR011701MFS
IPR001958Tet-R_TetA/multi-R_MdtG
Homology
BLAST of EWM27858.1 vs. NCBI_GenBank
Match: gi|585110185|gb|EWM27858.1| (major facilitator superfamily mfs_1 [Nannochloropsis gaditana])

HSP 1 Score: 1429.46 bits (3699), Expect = 0.000e+0
Identity = 703/703 (100.00%), Postives = 703/703 (100.00%), Query Frame = 0
Query:    1 MTSSSVSAPRSPLLLAISALCMFQNMIWSRHGASLWTSATITTEMSPLPTLPSHGPSTGCKSWCRSEAWKRRDGDRQKSTTMPDIVGSLNMTGRQGIHLARMRGGASRAARVSPSPAADAKKRQPVASSSSPKDGALSEDLGPPSTLTFKNAPSSLRMINGVFIRTAWDHNGRAHYEKVMTSEEMTLAQELSVFAEERRVVHLYWHGSQWVLHLDLDPALNYDNYLGYCKVNSRDPGRTDRSWLLRENKKWLPATSLRVHVPGRQYEKREESASAAAALASIPTPPRLVPVFIAFFLDAVGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTIGCIVMGSISDRCGRRQVMLCCLMASFVSLSLVARAKTLPQVAIGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPLLGLLGSRGLHLDSRGILKRAAILPALAFSYGLVFIKETKDAVAIDRTFQKKDSSAASLASSPPSLPKAKGAGWSIPSFPVRLLILNGFLLMYAFSVETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTVLYLKSIERKRLAAEED 703
            MTSSSVSAPRSPLLLAISALCMFQNMIWSRHGASLWTSATITTEMSPLPTLPSHGPSTGCKSWCRSEAWKRRDGDRQKSTTMPDIVGSLNMTGRQGIHLARMRGGASRAARVSPSPAADAKKRQPVASSSSPKDGALSEDLGPPSTLTFKNAPSSLRMINGVFIRTAWDHNGRAHYEKVMTSEEMTLAQELSVFAEERRVVHLYWHGSQWVLHLDLDPALNYDNYLGYCKVNSRDPGRTDRSWLLRENKKWLPATSLRVHVPGRQYEKREESASAAAALASIPTPPRLVPVFIAFFLDAVGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTIGCIVMGSISDRCGRRQVMLCCLMASFVSLSLVARAKTLPQVAIGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPLLGLLGSRGLHLDSRGILKRAAILPALAFSYGLVFIKETKDAVAIDRTFQKKDSSAASLASSPPSLPKAKGAGWSIPSFPVRLLILNGFLLMYAFSVETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTVLYLKSIERKRLAAEED
Sbjct:    1 MTSSSVSAPRSPLLLAISALCMFQNMIWSRHGASLWTSATITTEMSPLPTLPSHGPSTGCKSWCRSEAWKRRDGDRQKSTTMPDIVGSLNMTGRQGIHLARMRGGASRAARVSPSPAADAKKRQPVASSSSPKDGALSEDLGPPSTLTFKNAPSSLRMINGVFIRTAWDHNGRAHYEKVMTSEEMTLAQELSVFAEERRVVHLYWHGSQWVLHLDLDPALNYDNYLGYCKVNSRDPGRTDRSWLLRENKKWLPATSLRVHVPGRQYEKREESASAAAALASIPTPPRLVPVFIAFFLDAVGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTIGCIVMGSISDRCGRRQVMLCCLMASFVSLSLVARAKTLPQVAIGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPLLGLLGSRGLHLDSRGILKRAAILPALAFSYGLVFIKETKDAVAIDRTFQKKDSSAASLASSPPSLPKAKGAGWSIPSFPVRLLILNGFLLMYAFSVETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTVLYLKSIERKRLAAEED 703          
BLAST of EWM27858.1 vs. NCBI_GenBank
Match: gi|553192030|ref|XP_005855501.1| (major facilitator superfamily mfs 1 [Nannochloropsis gaditana CCMP526] >gi|422293559|gb|EKU20859.1| major facilitator superfamily mfs 1 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 347.821 bits (891), Expect = 3.145e-113
Identity = 171/172 (99.42%), Postives = 172/172 (100.00%), Query Frame = 0
Query:  532 KDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTVLYLKSIERKRLAAEED 703
            +DNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTVLYLKSIERKRLAAEED
Sbjct:    4 RDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTVLYLKSIERKRLAAEED 175          
BLAST of EWM27858.1 vs. NCBI_GenBank
Match: gi|299473515|emb|CBN77911.1| (major facilitator transporter [Ectocarpus siliculosus])

HSP 1 Score: 220.32 bits (560), Expect = 2.708e-63
Identity = 110/191 (57.59%), Postives = 148/191 (77.49%), Query Frame = 0
Query:  507 VRLLILNGFLLMYAFSVETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTVLYLKSIERKR 697
            V LL+ NGFLLMYAFS+ET+YAMF+KDNFGYGE+ L  VFALNG+AVG+LQ+  +++L   LGKH+ML  GN+ LA GMVG++  R+ + HF++F++HI+GY+++DTAL +LISRY++P  QGR+LG + AAQS AR++SP+       WSK     LP GALPY+ GS FPL+GV VP  LYL+S+E K+
Sbjct:   39 VMLLVGNGFLLMYAFSIETIYAMFLKDNFGYGESVLSMVFALNGVAVGVLQLLGMRHLVRLLGKHMMLIAGNMCLAAGMVGVAFCRHPVVHFALFTVHIMGYSLADTALVALISRYASPATQGRSLGLNQAAQSMARVVSPV-------WSKRRLQ-LPLGALPYLVGSVFPLVGVAVPFWLYLRSVEAKK 221          
BLAST of EWM27858.1 vs. NCBI_GenBank
Match: gi|1175205253|ref|WP_081753160.1| (MFS transporter [Rhodospirillales bacterium URHD0088])

HSP 1 Score: 154.066 bits (388), Expect = 6.113e-37
Identity = 135/426 (31.69%), Postives = 208/426 (48.83%), Query Frame = 0
Query:  285 PPRLVPVFIAFFLDAVGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTIGCIVMGSISDRCGRRQVMLCCLMASFVSLSLVARAKTLPQVAIGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPLLGLLGSRG----LHLDSRGILKRAAILPALAFSYGLVFIKET--KDAVAIDRTFQKKDSSAASLASSPPSLPKAKGAGWSIPSFPVRLLILNGFLLMYAF-SVETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTVLYLKSIERKRLAAEED 703
            PP +  +F    +D +G GL  PLLPFY    GA+ F + ++LA   LAQ     + G +SDR GRR V+L  L  S V+   +  A +L  +   R + G   G +  AQ+ VAD+   E RAK +G I A  G GF+ GP LG   + G     HL +       A L ALAF   L+F+KE+   +   + R   +  + A  LA      P  +G            LIL  FL+++AF ++E  +AM+ +  FG+G   +G VF   G+    +Q  L+  L  R G+  +L  G   + LG+V L   +      +  +L  +G  ++  +L SLISR +  + QG  LG + +  S ARI+ P +AGI++E          P A P++ G+AF  + +++   +   + +R   AA E 
Sbjct:   33 PPGMPILFAIVVIDLIGFGLVIPLLPFYGERFGASPFAVTVILAMYSLAQLFAAPLWGRLSDRWGRRPVLLISLAGSVVAYLWMGVAYSLWVLFAARFLQGAMAGNIAAAQAYVADVTTPENRAKGMGMIGAAFGIGFIIGPALGGFLAGGDPATAHLGAP--FYVGAFLSALAFVAALIFLKESLPPERRGLIRRVGRLAAIADELAR-----PDLRG------------LILLSFLVIFAFAAMEVTFAMWARRQFGWGPLQVGYVFTFVGVISAAMQGGLVGRLAKRHGEGRLLTIGLAAILLGLVILPAAKGVALLLAATALLAVGMGLTQPSLNSLISRRARSDEQGEVLGVNQSVGSFARIVGPWLAGIVFE-------VFGPSA-PFVGGAAFMAVALILAVRVLRPAADRIEEAASEQ 431          
BLAST of EWM27858.1 vs. NCBI_GenBank
Match: gi|1214782719|ref|WP_088893873.1| (tetracycline resistance MFS efflux pump [Leptolyngbya ohadii])

HSP 1 Score: 147.902 bits (372), Expect = 5.441e-35
Identity = 117/383 (30.55%), Postives = 191/383 (49.87%), Query Frame = 0
Query:  284 TPPRLVPVFIAFFLDAVGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTIGCIVMGSISDRCGRRQVMLCCLMASFVSLSLVARAKTLPQVAIGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPLL-GLLGSRGLHLDSRGILKRAAILPALAFSYGLVFIKET--KDAVAIDRTFQKKDSSAASLASSPPSLPKAKGAGWSIPSFPVRLLILNGFLLMYAFS-VETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLL-----RYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWS 657
            T PRL+ +FI   +D +G  L  P+LPF +    ++AF LGL+ +   +AQ I   ++G++SDR GRR ++L C++ + VS  L   A +L  +   RV+ G+ GG    AQ+ +AD+   E RAK  G   A  G GF  GP L G+L +  L+L     +  A  +  L F  G   + E+  KD     R    KD +     +     PK +G            L+++ F+  +AF+   +++ +F+ D +G+G T    VF   GI   ++Q  LI+ L  R G+  +   G LL+A+   G++L+           ++  ++  +G  +    L  LIS   + + QG+ LG + A QS A I+ PL AG +++ S
Sbjct:   12 TMPRLLFIFITILIDKLGESLIFPILPFLVERFRSDAFTLGLLASSFAIAQFIASPIIGALSDRYGRRPILLVCILGTAVSYYLFGLAASLWMLFFSRVVDGITGGVAATAQAYIADISSPENRAKNFGLTGAAFGLGFTLGPALGGVLANINLNLP----VFVAGTIALLNFFLGWFVLPESLEKDQ---RRPLTLKDLNPIGQLADLLKNPKIQG------------LLISFFIFNFAFAGFSSIFVLFLNDRYGWGPTQAAIVFFFIGIVSTIVQGGLIRQLLPRFGEAKLSVMGLLLVAIAFAGIALIPPSGAMLVPALYTTQAMLALGVGLIIPCLRGLISNRVSDQEQGKTLGGNQALQSVATILGPLWAGWMFDHS 375          
BLAST of EWM27858.1 vs. NCBI_GenBank
Match: gi|495186837|ref|WP_007911627.1| (tetracycline resistance MFS efflux pump [Ktedonobacter racemifer] >gi|297553054|gb|EFH86919.1| major facilitator superfamily MFS_1 [Ktedonobacter racemifer DSM 44963])

HSP 1 Score: 147.902 bits (372), Expect = 5.473e-35
Identity = 122/397 (30.73%), Postives = 197/397 (49.62%), Query Frame = 0
Query:  296 FLDAVGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTIGCIVMGSISDRCGRRQVMLCCLMASFVSLSLVARAKTLPQVAIGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPLLGLLGSRGLHLDSRGILKRAAILPALAFSYGLVFIKETKDAVAIDRTFQKKDSSAASLASSPPSLPKAKGAGW-SIPSFPVRL-LILNGFLLMYAFS-VETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAFPLLGVMV--PTV 687
             +D  G GL  PLLPF+    GA+AF +G++ +   LAQ +   ++G++SDR GR+ +++  L+   +SL L A A +LP + + R +GG+    +  AQ+ VAD+ P E RA+ +G I A +G GFV GP LG L +         I    A+L A   +  +V + E++  +A     Q K +  + +         A  +GW ++   PV L LIL   L   AF+ +E ++ +F +  F +G T    VF   G+ + ++Q  L+  L  R  +  ++  G +L+ALG++ L+      W      +  IG       +++L+S  S  E QG  LG S      ARII PL+AG +Y+              P+I G    +L  +V  PT+
Sbjct:   17 LIDITGFGLVIPLLPFWAEHFGADAFMIGMLTSLYALAQFLFTPILGTLSDRYGRKPIIVISLVIEALSLVLTALAGSLPMLLVARFVGGLGASNIGSAQAFVADVTPPEKRAQGMGMIGAAIGLGFVIGPALGGLLAGAYPGLPFWIAATVALLNA---ALVIVLLPESRKRLAGQEQGQNKKAGKSGIG--------AFFSGWGNLAHNPVVLSLILINLLYTVAFTGMENIFPLFTQHYFHWGATQNAFVFTYIGVIIVIMQGGLVSQLVKRWRERGVMLAGLVLMALGLIALAFSTQLSWLMVTLGVLSIGDGAVSPTVSTLLSFASPGETQGELLGLSQGFAGLARIIGPLIAGAIYKIGSA--------GTPFIVGGILVVLATLVAFPTI 394          
BLAST of EWM27858.1 vs. NCBI_GenBank
Match: gi|1084792851|gb|OGQ30610.1| (hypothetical protein A3B79_05280 [Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_50_15] >gi|1084823959|gb|OGQ58032.1| hypothetical protein A3I75_01355 [Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_50_16] >gi|1084836262|gb|OGQ69059.1| hypothetical protein A3F89_00585 [Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_50_11])

HSP 1 Score: 146.747 bits (369), Expect = 8.467e-35
Identity = 118/371 (31.81%), Postives = 186/371 (50.13%), Query Frame = 0
Query:  288 LVPVFIAFFLDAVGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTIGCIVMGSISDRCGRRQVMLCCLMASFVSLSLVARAKTLPQVAIGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPLLGLLGSRGLHLDSRGILKRAAILPALA-FSYGLVFIKE-TKDAVAIDRTFQKKDSSAASLASSPPSLPKAKGAGWSIPSFPVRLLILNGFLLMYAFS-VETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYE 655
            L+ +F+  F+D +G G+  P+LP+Y  S GA+A Q+G ++      Q I     GS+SDR GRR ++L  ++    S+ ++  A +L  +  GR++ G FG  V  A + +AD+ P E RAK +G I A  G GF+ GP +G   S+       G    AA   +LA F + LV ++E  + +    R+  +KD     L S P  +P                 IL  FL+   F+ +ETV+A FI + FG      G + AL  + + L+Q   I  L  + G+  ++  G L++ + ++  S              H +GY+I+  +L SL SR++    QG  +G   +A S AR+I PL AGILY+
Sbjct:    6 LIIIFLVIFVDLLGFGMIIPILPYYAKSFGASATQMGWLMVCYSGLQFIFSPFWGSLSDRYGRRPILLTSILGVGASMIVLGAASSLFWLFTGRLLAGFFGANVAAASAYIADITPPEKRAKGMGMIGAAFGLGFLFGPAIGGFLSQ----WGYGTAAFAAGGLSLANFLFALVVLREPRRQSDGAHRSHFQKDLWFKILRSPPTGIP-----------------ILLFFLVTTGFAQLETVFAFFILERFGLQAPHAGYILALMALVIVLIQGGAIGRLSHKFGEARLVICGTLVMGITLIAASFSLLVTLFIVALIFHALGYSITHPSLMSLTSRHAPQNLQGMTMGIYQSAGSMARVIGPLTAGILYD 355          
BLAST of EWM27858.1 vs. NCBI_GenBank
Match: gi|1113410452|gb|OJW73000.1| (hypothetical protein BGO57_06855 [Sphingomonadales bacterium 63-6])

HSP 1 Score: 142.895 bits (359), Expect = 2.170e-33
Identity = 124/416 (29.81%), Postives = 198/416 (47.60%), Query Frame = 0
Query:  287 RLVPVFIAFFLDAVGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTIGCIVMGSISDRCGRRQVMLCCLMASFVSLSLVARAKTLPQVAIGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPLL-GLLGSRGLHL-DSRGILKRAAILPALAFSYGLVFIKETKDAVAIDRTFQKKDSSAASLASSPPSLPKAKGAGWSIPSFPVRLLILNGFLLMYAFSVETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAFPLLGVMVPTVLYLKSIERKRLAA 700
            R+ P+  A F++  G  L  PLLPFY    GA  F++ L+ A   L    G I  G  SD+ GRR V++     + V+    A A  L      RV+ G FGG + +AQ  +AD  P E RAK +G   +    GF  GP++ GL    G  L D R  +  AA L A+A  + ++ +++        R   K     A +  SP                  RL +++ F +    S E VY ++ + NFG+    LG  F   G+   ++Q+FL+  L  R G+  ++  G L++AL M+   +LR      ++  + ++G++++     +L SR +  E QG  +G   A+ + +RI++P   G++YE     GH      +P+ AG+A  +L   VP  L L  + +KR AA
Sbjct:    5 RMFPLMFAVFINIAGFSLILPLLPFYGPLFGAGPFEVALLFAAYSLGNVFGEIYWGRQSDKWGRRAVLVLTTAGAAVTYVAFAFAPVLWLAIAIRVVNGFFGGTLSVAQGFLADASPPEQRAKAMGLFGSAFSLGFAFGPVIGGLFAGAGTSLADFRAPILVAAGLSAVAAIWSMLVLRDVNPPAGKARALPKYSEGFAYVVQSP---------------LLFRLFVISFFGIAAFASSEAVYGLWSEANFGWTARDLGFAFIAIGLGGLVVQLFLLHPLVTRFGEGRVITAGLLIIALSMLLQPILRDPYVAVALMGMLMMGHSLAFPTAGALTSRTAPVERQGSVMGLIMASNAFSRIVAPPAFGLIYE---TAGHD-----IPWFAGAAMIVL-FAVPFALQLVGLTKKRAAA 396          
BLAST of EWM27858.1 vs. NCBI_GenBank
Match: gi|1176522273|ref|WP_082349269.1| (MFS transporter [Candidatus Kryptonium thompsoni])

HSP 1 Score: 142.895 bits (359), Expect = 4.128e-33
Identity = 111/370 (30.00%), Postives = 176/370 (47.57%), Query Frame = 0
Query:  287 RLVPVFIAFFLDAVGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTIGCIVMGSISDRCGRRQVMLCCLMASFVSLSLVARAKTLPQVAIGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPLL-GLLGSRGLHLDSRGILKRAAILPALAFSYGLVFIKETKDAVAIDRTFQKKDSSAASLASSPPSLPKAKGAGWSIPSFPVRLLILNGFLLMYAFSVE-TVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALGMVGLSLLRYKLWHFSMFSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILY 654
            RL  +F+   +D +G G+  PLLPFY ++ GA ++Q+GL+++     Q I   + G ISDR GRR V+L  +  SFVS  + A A +L  + + R++ G  G  +  AQ+ +AD+ P E RAK +G + A  G GFV GPL+ G+L   G +      +  A+ L  L F   L F+ E           +K +S   S +     L + K          +  L    F++ +  S+   V+ +F KD F +  +  G +F   GI   + Q +L+     R  +  +L  G  L+  G+ G+    +     +  +    G  I+   + SLISR +  E+QG  LG   +  S AR+  P   G LY
Sbjct:   39 RLGVIFLTVLIDLIGFGIVIPLLPFYALNFGAKSYQIGLLVSSFSFMQFIFNPIWGRISDRIGRRPVILISVFGSFVSYLIFALADSLWVLFLSRMLAGFMGANIATAQAYIADITPPEERAKGMGIVGAGFGIGFVVGPLIGGILSKFGYNFP----IFFASGLSLLNFFLALKFLPEPHS--------RKFESRGLSYSQGISGLFQNK---------VLIFLYFTFFVITFGISINYVVFPLFTKDVFNFDASHNGLLFGYVGIIGVMTQGYLVGKFTKRFSEERVLIAGTFLMCFGLFGMIFSVHFFQFLTFTTFFTFGSGITTPTVLSLISRQAKSENQGVTLGLGQSLSSLARVFGPSTGGFLY 387          
BLAST of EWM27858.1 vs. NCBI_GenBank
Match: gi|1084767225|gb|OGQ07617.1| (hypothetical protein A3C45_00105 [Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_40_28] >gi|1084781170|gb|OGQ20032.1| hypothetical protein A3E27_02770 [Deltaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_40_32] >gi|1084804102|gb|OGQ40599.1| hypothetical protein A3I69_10195 [Deltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_40_36] >gi|1084819688|gb|OGQ54268.1| hypothetical protein A3G32_02725 [Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_40_28])

HSP 1 Score: 141.739 bits (356), Expect = 4.826e-33
Identity = 122/395 (30.89%), Postives = 195/395 (49.37%), Query Frame = 0
Query:  288 LVPVFIAFFLDAVGTGLASPLLPFYIMSLGANAFQLGLVLAFNYLAQTIGCIVMGSISDRCGRRQVMLCCLMASFVSLSLVARAKTLPQVAIGRVIGGMFGGFVPLAQSAVADLVPVEGRAKFLGRIQACMGAGFVAGPLLGLLGSRGLHLDSRGI-LKRAAILPALAFSYGLVFIKETKDAVAIDRTFQKKDSSAASLASSPPSLPKAKGAGWSIPSFPVRLLILNGFLLMYAFSVETVYAMFIKDNFGYGETALGAVFALNGIAVGLLQVFLIKNLFARLGKHVMLAFGNLLLALG--MVGLSLLRYKLWHFSM--FSLHIIGYAISDTALASLISRYSAPEHQGRNLGWSHAAQSCARIISPLVAGILYEWSKEPGHPLPPGALPYIAGSAF 677
            L+ +F   F+D +G G+  P+LP+Y  S GA A  LG ++      Q +     G +SDR GRR V+L CL+    SL L+  AK++  + + R++GG FG  +  A + +AD    E R K +G I A  G GF+ GP LG + SR     S G     AA +  L F +   F+KE +    ++   +    S  SL     +L K K A W I  F +  L +          +ET + +F+   F       G + A   + +  +Q   I +L  + G+  ++  G+LL+ LG  +V +S     L++ S+  F +H +GYA+ + +LA L+S  +  + QG  +G  H+A S  RI+ PL+AG L++   E  +P     L ++  S F
Sbjct:    6 LLIIFFVIFIDLLGFGIVIPILPYYAASFGATATNLGWLMMCYSAMQFLFSPFWGGLSDRIGRRPVILICLVGIGSSLVLLGMAKSMAWLFLARLLGGFFGANISAATAYIADTTTTENRTKGMGIIGAAFGLGFLFGPALGGVLSR----TSYGFPALVAAGIAGLNFIFAFFFLKEPR----LNEKERATHRSHLSLFFIRQTLQKQKIA-WPILFFFLTTLGIA--------QLETAFGLFLLKRFHLDAYHAGLILAFIALVMVFIQGGAIGSLVKKFGEKNLIRGGSLLMTLGLALVAVSF----LFNLSLVGFFIHALGYAVVNPSLAGLVSSETTGDVQGSTMGVYHSAGSLGRIVGPLLAGRLFDSFGES-YPFLVACLFFVLVSFF 378          
The following BLAST results are available for this feature:
BLAST of EWM27858.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110185|gb|EWM27858.1|0.000e+0100.00major facilitator superfamily mfs_1 [Nannochlorops... [more]
gi|553192030|ref|XP_005855501.1|3.145e-11399.42major facilitator superfamily mfs 1 [Nannochlorops... [more]
gi|299473515|emb|CBN77911.1|2.708e-6357.59major facilitator transporter [Ectocarpus siliculo... [more]
gi|1175205253|ref|WP_081753160.1|6.113e-3731.69MFS transporter [Rhodospirillales bacterium URHD00... [more]
gi|1214782719|ref|WP_088893873.1|5.441e-3530.55tetracycline resistance MFS efflux pump [Leptolyng... [more]
gi|495186837|ref|WP_007911627.1|5.473e-3530.73tetracycline resistance MFS efflux pump [Ktedonoba... [more]
gi|1084792851|gb|OGQ30610.1|8.467e-3531.81hypothetical protein A3B79_05280 [Deltaproteobacte... [more]
gi|1113410452|gb|OJW73000.1|2.170e-3329.81hypothetical protein BGO57_06855 [Sphingomonadales... [more]
gi|1176522273|ref|WP_082349269.1|4.128e-3330.00MFS transporter [Candidatus Kryptonium thompsoni][more]
gi|1084767225|gb|OGQ07617.1|4.826e-3330.89hypothetical protein A3C45_00105 [Deltaproteobacte... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2824rna2824Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications