EWM27898.1, cds2777 (CDS) Nannochloropsis gaditana

Overview
NameEWM27898.1
Unique Namecds2777
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1204213..1204653 +
Alignment locationCM002459.1:1204803..1204922 +
Alignment locationCM002459.1:1205157..1205480 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27898.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100197g6.5174.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1204213..1204653 +
CM002459.1supercontigCM002459.1:1204803..1204922 +
CM002459.1supercontigCM002459.1:1205157..1205480 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|585110234|gb|EWM27898.1| (hypothetical protein Naga_100197g6 [Nannochloropsis gaditana])

HSP 1 Score: 581.252 bits (1497), Expect = 0.000e+0
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
Query:    1 MWQTVASSGESDGNSGSSSEGSGNEDSEGDGRRVDMKEVGAMSKRKKVEKEKEGRSKTDEREGERATKRRKREKKEKKRKHEERERKRRRKEEKDDRKKEKRRKKDGKKEEKKKKKKKKERRDDKAKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYKVQEEVKGSNQCGTA 294
            MWQTVASSGESDGNSGSSSEGSGNEDSEGDGRRVDMKEVGAMSKRKKVEKEKEGRSKTDEREGERATKRRKREKKEKKRKHEERERKRRRKEEKDDRKKEKRRKKDGKKEEKKKKKKKKERRDDKAKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYKVQEEVKGSNQCGTA
Sbjct:    1 MWQTVASSGESDGNSGSSSEGSGNEDSEGDGRRVDMKEVGAMSKRKKVEKEKEGRSKTDEREGERATKRRKREKKEKKRKHEERERKRRRKEEKDDRKKEKRRKKDGKKEEKKKKKKKKERRDDKAKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYKVQEEVKGSNQCGTA 294          
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|553184391|ref|XP_005854080.1| (nucleic acid binding protein [Nannochloropsis gaditana CCMP526] >gi|422294985|gb|EKU22284.1| nucleic acid binding protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0
Identity = 280/282 (99.29%), Postives = 280/282 (99.29%), Query Frame = 0
Query:    1 MWQTVASSGESDGNSGSSSEGSGNEDSEGDGRRVDMKEVGAMSKRKKVEKEKEGRSKTDEREGERATKRRKREKKEKKRKHEERERKRRRKEEKDDRKKEKRRKKDGKKEEKKKKKKKK-ERRDDKAKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYKV 281
            MWQTVASSGESDGNSGSSSEGSGNEDSEGDGRRVDMKEVGAMSKRKKVEKEKEGRSKTDEREGERATKRRKREKKEKKRKHEERERKRRRKEEKDDRKKEKRRKKDGKKEEKKKKKKKK ERRDDKAKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 
Sbjct:   94 MWQTVASSGESDGNSGSSSEGSGNEDSEGDGRRVDMKEVGAMSKRKKVEKEKEGRSKTDEREGERATKRRKREKKEKKRKHEERERKRRRKEEKDDRKKEKRRKKDGKKEEKKKKKKKKKERRDDKAKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYKA 375          
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|553186765|ref|XP_005854485.1| (nucleic acid binding protein [Nannochloropsis gaditana CCMP526] >gi|422294573|gb|EKU21873.1| nucleic acid binding protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 333.569 bits (854), Expect = 7.106e-111
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0
Query:  126 AKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYKV 281
            AKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 
Sbjct:  169 AKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYKA 324          
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|695397276|ref|XP_009521701.1| (hypothetical protein PHYSODRAFT_350329 [Phytophthora sojae] >gi|348686598|gb|EGZ26413.1| hypothetical protein PHYSODRAFT_350329 [Phytophthora sojae])

HSP 1 Score: 122.865 bits (307), Expect = 4.686e-29
Identity = 64/151 (42.38%), Postives = 96/151 (63.58%), Query Frame = 0
Query:  134 AVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKE----GREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 280
            AV+ +++GK+GI+RESDFH K   F+ W +++K + E      EA+ LF+ YMEDYNT T PH KYY++E YEM  Y++ Q KA  K+     +  G   DEE  R E +   ++ E+ +    L++M K+K +A++E+E LRA+MQ  YK
Sbjct:  173 AVNQDEYGKYGILRESDFHSKSVSFQAWLRDVKKMGEFNGPKWEAMELFKEYMEDYNTCTLPHEKYYDIEKYEMKRYQKQQRKAYAKQKGASDKALGALADEERVRRERQAAREKKEQEEFRLVLQLMDKDKIEAMREQERLRAQMQLHYK 323          
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|953497895|emb|CEG40655.1| (hypothetical protein PHALS_10841 [Plasmopara halstedii])

HSP 1 Score: 120.939 bits (302), Expect = 3.086e-28
Identity = 63/151 (41.72%), Postives = 95/151 (62.91%), Query Frame = 0
Query:  134 AVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREG----GVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 280
            AV+ N++GK GI+RESD HRK   F+ W +++K   E      EA+ LF+ YMEDYNT T PH KYY++E YE+ +Y++ Q KA  K G       G+  DEE  R + +   ++ E+ D    +++M K+K +A++E+E LR++MQ  YK
Sbjct:  185 AVNQNEYGKFGILRESDIHRKSVSFQAWLRDVKKQGEFNGPKWEAMELFKEYMEDYNTCTLPHVKYYDIERYELKQYQKKQDKARSKHGAASDKVLGMVADEERVRRDRQAMREQKEQEDFRLVMQLMDKDKINAMREQERLRSQMQMFYK 335          
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|301103366|ref|XP_002900769.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262101524|gb|EEY59576.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 116.701 bits (291), Expect = 2.148e-27
Identity = 62/151 (41.06%), Postives = 92/151 (60.93%), Query Frame = 0
Query:  134 AVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREG----GVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 280
            AV+ +++GK+GI+RESDFH K   F+ W +++K + E      EA+ LF+ YMEDYNT T PH KYY++E YEM  Y++ Q KA  K+            DEE  R E      + E+ +    L++M K+K +A++E+E LR++MQ  YK
Sbjct:   97 AVNQDEYGKYGILRESDFHNKSVSFQAWVRDVKKMGEFNGPKWEAMELFKEYMEDYNTCTLPHEKYYDIEKYEMKRYQKQQRKAHAKQKSASDEALDTLADEERVRRERLAARDKKEQEEFRLVLQLMDKDKIEAMREQERLRSQMQMFYK 247          
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|970656369|gb|KUF94390.1| (hypothetical protein AM588_10009842 [Phytophthora nicotianae])

HSP 1 Score: 115.931 bits (289), Expect = 4.528e-27
Identity = 61/152 (40.13%), Postives = 93/152 (61.18%), Query Frame = 0
Query:  134 AVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGG-----VFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 280
            AV+ +++GK+GI+RESDFH K   F+ W +++K + E      EA+ LF+ YMEDYNT T PH KYY++E YEM  Y + Q KA  K+             DE+  R E +   ++ E+ +    L++M K+K +A++E+E LR++MQ  YK
Sbjct:  101 AVNQDEYGKYGILRESDFHSKSVSFQAWLRDVKKMGEFNGPKWEAMELFKEYMEDYNTCTLPHEKYYDIEKYEMKRYHKQQRKAYAKQKDTSNKTLMDTLADEDRVRRERQAAREKKEQEEFRLVLQLMDKDKIEAMREQERLRSQMQMFYK 252          
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|568038997|gb|ETM36511.1| (hypothetical protein L914_16828, partial [Phytophthora parasitica])

HSP 1 Score: 116.701 bits (291), Expect = 4.564e-27
Identity = 61/152 (40.13%), Postives = 93/152 (61.18%), Query Frame = 0
Query:  134 AVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREG-----GVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 280
            AV+ +++GK+GI+RESDFH K   F+ W +++K + E      EA+ LF+ YMEDYNT T PH KYY++E YEM  Y + Q KA  K+             DE+  R E +   ++ E+ +    L++M K+K +A++E+E LR++MQ  YK
Sbjct:  133 AVNQDEYGKYGILRESDFHSKSVSFQAWLRDVKKMGEFNGPKWEAMELFKEYMEDYNTCTLPHEKYYDIEKYEMKRYHKQQRKAYAKQKDTSDKTLMDTLADEDRVRRERQAAREKKEQEEFRLVLQLMDKDKIEAMREQERLRSQMQMFYK 284          
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|673043947|ref|XP_008875934.1| (hypothetical protein H310_11141 [Aphanomyces invadans] >gi|574468214|gb|ETV95233.1| hypothetical protein H310_11141 [Aphanomyces invadans])

HSP 1 Score: 114.775 bits (286), Expect = 7.508e-27
Identity = 67/151 (44.37%), Postives = 92/151 (60.93%), Query Frame = 0
Query:  134 AVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEG-REGGVFK---DEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 280
            A+D + +GK+GI+RESDFH K   F VW +E+K + +      EA+ LF+ YMEDYNTAT PH KYY+VE YEM ++++       KEG R+GG      DEE  R E  +   E E  D    ++ MSKEK + ++ +E LR +MQ  YK
Sbjct:   84 AIDQSDYGKYGILRESDFHAKAVSFNVWLREVKKISDFNGPKWEAMELFKEYMEDYNTATLPHEKYYDVEKYEMRQHRK-------KEGKRKGGATNAHDDEEAMRRERLRQRVEEENKDFSLIMQTMSKEKIENMRYQEKLRTQMQLHYK 227          
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|570971200|gb|ETP34319.1| (hypothetical protein F442_17339 [Phytophthora parasitica P10297])

HSP 1 Score: 116.701 bits (291), Expect = 1.115e-26
Identity = 61/152 (40.13%), Postives = 93/152 (61.18%), Query Frame = 0
Query:  134 AVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREG-----GVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 280
            AV+ +++GK+GI+RESDFH K   F+ W +++K + E      EA+ LF+ YMEDYNT T PH KYY++E YEM  Y + Q KA  K+             DE+  R E +   ++ E+ +    L++M K+K +A++E+E LR++MQ  YK
Sbjct:  175 AVNQDEYGKYGILRESDFHSKSVSFQAWLRDVKKMGEFNGPKWEAMELFKEYMEDYNTCTLPHEKYYDIEKYEMKRYHKQQRKAYAKQKDTSDKTLMDTLADEDRVRRERQAAREKKEQEEFRLVLQLMDKDKIEAMREQERLRSQMQMFYK 326          
The following BLAST results are available for this feature:
BLAST of EWM27898.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110234|gb|EWM27898.1|0.000e+0100.00hypothetical protein Naga_100197g6 [Nannochloropsi... [more]
gi|553184391|ref|XP_005854080.1|0.000e+099.29nucleic acid binding protein [Nannochloropsis gadi... [more]
gi|553186765|ref|XP_005854485.1|7.106e-11199.36nucleic acid binding protein [Nannochloropsis gadi... [more]
gi|695397276|ref|XP_009521701.1|4.686e-2942.38hypothetical protein PHYSODRAFT_350329 [Phytophtho... [more]
gi|953497895|emb|CEG40655.1|3.086e-2841.72hypothetical protein PHALS_10841 [Plasmopara halst... [more]
gi|301103366|ref|XP_002900769.1|2.148e-2741.06conserved hypothetical protein [Phytophthora infes... [more]
gi|970656369|gb|KUF94390.1|4.528e-2740.13hypothetical protein AM588_10009842 [Phytophthora ... [more]
gi|568038997|gb|ETM36511.1|4.564e-2740.13hypothetical protein L914_16828, partial [Phytopht... [more]
gi|673043947|ref|XP_008875934.1|7.508e-2744.37hypothetical protein H310_11141 [Aphanomyces invad... [more]
gi|570971200|gb|ETP34319.1|1.115e-2640.13hypothetical protein F442_17339 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2785rna2785Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications