EWM27898.1, cds2777 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|585110234|gb|EWM27898.1| (hypothetical protein Naga_100197g6 [Nannochloropsis gaditana]) HSP 1 Score: 581.252 bits (1497), Expect = 0.000e+0 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
Query: 1 MWQTVASSGESDGNSGSSSEGSGNEDSEGDGRRVDMKEVGAMSKRKKVEKEKEGRSKTDEREGERATKRRKREKKEKKRKHEERERKRRRKEEKDDRKKEKRRKKDGKKEEKKKKKKKKERRDDKAKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYKVQEEVKGSNQCGTA 294
MWQTVASSGESDGNSGSSSEGSGNEDSEGDGRRVDMKEVGAMSKRKKVEKEKEGRSKTDEREGERATKRRKREKKEKKRKHEERERKRRRKEEKDDRKKEKRRKKDGKKEEKKKKKKKKERRDDKAKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYKVQEEVKGSNQCGTA
Sbjct: 1 MWQTVASSGESDGNSGSSSEGSGNEDSEGDGRRVDMKEVGAMSKRKKVEKEKEGRSKTDEREGERATKRRKREKKEKKRKHEERERKRRRKEEKDDRKKEKRRKKDGKKEEKKKKKKKKERRDDKAKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYKVQEEVKGSNQCGTA 294
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|553184391|ref|XP_005854080.1| (nucleic acid binding protein [Nannochloropsis gaditana CCMP526] >gi|422294985|gb|EKU22284.1| nucleic acid binding protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 552.747 bits (1423), Expect = 0.000e+0 Identity = 280/282 (99.29%), Postives = 280/282 (99.29%), Query Frame = 0
Query: 1 MWQTVASSGESDGNSGSSSEGSGNEDSEGDGRRVDMKEVGAMSKRKKVEKEKEGRSKTDEREGERATKRRKREKKEKKRKHEERERKRRRKEEKDDRKKEKRRKKDGKKEEKKKKKKKK-ERRDDKAKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYKV 281
MWQTVASSGESDGNSGSSSEGSGNEDSEGDGRRVDMKEVGAMSKRKKVEKEKEGRSKTDEREGERATKRRKREKKEKKRKHEERERKRRRKEEKDDRKKEKRRKKDGKKEEKKKKKKKK ERRDDKAKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK
Sbjct: 94 MWQTVASSGESDGNSGSSSEGSGNEDSEGDGRRVDMKEVGAMSKRKKVEKEKEGRSKTDEREGERATKRRKREKKEKKRKHEERERKRRRKEEKDDRKKEKRRKKDGKKEEKKKKKKKKKERRDDKAKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYKA 375
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|553186765|ref|XP_005854485.1| (nucleic acid binding protein [Nannochloropsis gaditana CCMP526] >gi|422294573|gb|EKU21873.1| nucleic acid binding protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 333.569 bits (854), Expect = 7.106e-111 Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0
Query: 126 AKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYKV 281
AKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK
Sbjct: 169 AKGAIIPGAVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYKA 324
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|695397276|ref|XP_009521701.1| (hypothetical protein PHYSODRAFT_350329 [Phytophthora sojae] >gi|348686598|gb|EGZ26413.1| hypothetical protein PHYSODRAFT_350329 [Phytophthora sojae]) HSP 1 Score: 122.865 bits (307), Expect = 4.686e-29 Identity = 64/151 (42.38%), Postives = 96/151 (63.58%), Query Frame = 0
Query: 134 AVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKE----GREGGVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 280
AV+ +++GK+GI+RESDFH K F+ W +++K + E EA+ LF+ YMEDYNT T PH KYY++E YEM Y++ Q KA K+ + G DEE R E + ++ E+ + L++M K+K +A++E+E LRA+MQ YK
Sbjct: 173 AVNQDEYGKYGILRESDFHSKSVSFQAWLRDVKKMGEFNGPKWEAMELFKEYMEDYNTCTLPHEKYYDIEKYEMKRYQKQQRKAYAKQKGASDKALGALADEERVRRERQAAREKKEQEEFRLVLQLMDKDKIEAMREQERLRAQMQLHYK 323
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|953497895|emb|CEG40655.1| (hypothetical protein PHALS_10841 [Plasmopara halstedii]) HSP 1 Score: 120.939 bits (302), Expect = 3.086e-28 Identity = 63/151 (41.72%), Postives = 95/151 (62.91%), Query Frame = 0
Query: 134 AVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREG----GVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 280
AV+ N++GK GI+RESD HRK F+ W +++K E EA+ LF+ YMEDYNT T PH KYY++E YE+ +Y++ Q KA K G G+ DEE R + + ++ E+ D +++M K+K +A++E+E LR++MQ YK
Sbjct: 185 AVNQNEYGKFGILRESDIHRKSVSFQAWLRDVKKQGEFNGPKWEAMELFKEYMEDYNTCTLPHVKYYDIERYELKQYQKKQDKARSKHGAASDKVLGMVADEERVRRDRQAMREQKEQEDFRLVMQLMDKDKINAMREQERLRSQMQMFYK 335
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|301103366|ref|XP_002900769.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262101524|gb|EEY59576.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 116.701 bits (291), Expect = 2.148e-27 Identity = 62/151 (41.06%), Postives = 92/151 (60.93%), Query Frame = 0
Query: 134 AVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREG----GVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 280
AV+ +++GK+GI+RESDFH K F+ W +++K + E EA+ LF+ YMEDYNT T PH KYY++E YEM Y++ Q KA K+ DEE R E + E+ + L++M K+K +A++E+E LR++MQ YK
Sbjct: 97 AVNQDEYGKYGILRESDFHNKSVSFQAWVRDVKKMGEFNGPKWEAMELFKEYMEDYNTCTLPHEKYYDIEKYEMKRYQKQQRKAHAKQKSASDEALDTLADEERVRRERLAARDKKEQEEFRLVLQLMDKDKIEAMREQERLRSQMQMFYK 247
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|970656369|gb|KUF94390.1| (hypothetical protein AM588_10009842 [Phytophthora nicotianae]) HSP 1 Score: 115.931 bits (289), Expect = 4.528e-27 Identity = 61/152 (40.13%), Postives = 93/152 (61.18%), Query Frame = 0
Query: 134 AVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREGG-----VFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 280
AV+ +++GK+GI+RESDFH K F+ W +++K + E EA+ LF+ YMEDYNT T PH KYY++E YEM Y + Q KA K+ DE+ R E + ++ E+ + L++M K+K +A++E+E LR++MQ YK
Sbjct: 101 AVNQDEYGKYGILRESDFHSKSVSFQAWLRDVKKMGEFNGPKWEAMELFKEYMEDYNTCTLPHEKYYDIEKYEMKRYHKQQRKAYAKQKDTSNKTLMDTLADEDRVRRERQAAREKKEQEEFRLVLQLMDKDKIEAMREQERLRSQMQMFYK 252
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|568038997|gb|ETM36511.1| (hypothetical protein L914_16828, partial [Phytophthora parasitica]) HSP 1 Score: 116.701 bits (291), Expect = 4.564e-27 Identity = 61/152 (40.13%), Postives = 93/152 (61.18%), Query Frame = 0
Query: 134 AVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREG-----GVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 280
AV+ +++GK+GI+RESDFH K F+ W +++K + E EA+ LF+ YMEDYNT T PH KYY++E YEM Y + Q KA K+ DE+ R E + ++ E+ + L++M K+K +A++E+E LR++MQ YK
Sbjct: 133 AVNQDEYGKYGILRESDFHSKSVSFQAWLRDVKKMGEFNGPKWEAMELFKEYMEDYNTCTLPHEKYYDIEKYEMKRYHKQQRKAYAKQKDTSDKTLMDTLADEDRVRRERQAAREKKEQEEFRLVLQLMDKDKIEAMREQERLRSQMQMFYK 284
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|673043947|ref|XP_008875934.1| (hypothetical protein H310_11141 [Aphanomyces invadans] >gi|574468214|gb|ETV95233.1| hypothetical protein H310_11141 [Aphanomyces invadans]) HSP 1 Score: 114.775 bits (286), Expect = 7.508e-27 Identity = 67/151 (44.37%), Postives = 92/151 (60.93%), Query Frame = 0
Query: 134 AVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEG-REGGVFK---DEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 280
A+D + +GK+GI+RESDFH K F VW +E+K + + EA+ LF+ YMEDYNTAT PH KYY+VE YEM ++++ KEG R+GG DEE R E + E E D ++ MSKEK + ++ +E LR +MQ YK
Sbjct: 84 AIDQSDYGKYGILRESDFHAKAVSFNVWLREVKKISDFNGPKWEAMELFKEYMEDYNTATLPHEKYYDVEKYEMRQHRK-------KEGKRKGGATNAHDDEEAMRRERLRQRVEEENKDFSLIMQTMSKEKIENMRYQEKLRTQMQLHYK 227
BLAST of EWM27898.1 vs. NCBI_GenBank
Match: gi|570971200|gb|ETP34319.1| (hypothetical protein F442_17339 [Phytophthora parasitica P10297]) HSP 1 Score: 116.701 bits (291), Expect = 1.115e-26 Identity = 61/152 (40.13%), Postives = 93/152 (61.18%), Query Frame = 0
Query: 134 AVDMNQFGKHGIIRESDFHRKKNDFEVWCQEIKGLPEIPRNHHEALRLFRYYMEDYNTATFPHPKYYNVEAYEMDEYKRGQLKAAFKEGREG-----GVFKDEEERRLESKKGAKEGERADLEWALKMMSKEKRDALKEEELLRAKMQQAYK 280
AV+ +++GK+GI+RESDFH K F+ W +++K + E EA+ LF+ YMEDYNT T PH KYY++E YEM Y + Q KA K+ DE+ R E + ++ E+ + L++M K+K +A++E+E LR++MQ YK
Sbjct: 175 AVNQDEYGKYGILRESDFHSKSVSFQAWLRDVKKMGEFNGPKWEAMELFKEYMEDYNTCTLPHEKYYDIEKYEMKRYHKQQRKAYAKQKDTSDKTLMDTLADEDRVRRERQAAREKKEQEEFRLVLQLMDKDKIEAMREQERLRSQMQMFYK 326 The following BLAST results are available for this feature:
BLAST of EWM27898.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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