EWM27900.1, cds2774 (CDS) Nannochloropsis gaditana

Overview
NameEWM27900.1
Unique Namecds2774
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:1189782..1189832 +
Alignment locationCM002459.1:1190070..1190115 +
Alignment locationCM002459.1:1190404..1190544 +
Alignment locationCM002459.1:1190837..1191000 +
Alignment locationCM002459.1:1191179..1192546 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27900.1
Productnuclear acid binding protein
Orig transcript idgnl|cribi|Naga_100197g10.5176.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:1189782..1189832 +
CM002459.1supercontigCM002459.1:1190070..1190115 +
CM002459.1supercontigCM002459.1:1190404..1190544 +
CM002459.1supercontigCM002459.1:1190837..1191000 +
CM002459.1supercontigCM002459.1:1191179..1192546 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait
IPR000504RRM_dom
Homology
[Close]
BLAST of EWM27900.1 vs. NCBI_GenBank
Match: gi|585110236|gb|EWM27900.1| (nuclear acid binding protein [Nannochloropsis gaditana])

HSP 1 Score: 1162.13 bits (3005), Expect = 0.000e+0
Identity = 589/589 (100.00%), Postives = 589/589 (100.00%), Query Frame = 0 
Query:    1 MGGTEEPCKTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAKKAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRSSPARAEGRRMGGMGGGMEGGMGMAGYPAMYATVGPGAGGGGYYPPTSHLHPPHPQHPPTHSPQAPPTQSGYHYAPGPIPYPPSSSSYLPPYHPQQPSPAQAASLYHPSQGGGGTHPYTHLSYSYQSHLHAPPHSLPPLAPGQDRGGYPPGGFSPQGSPDGREGGREGLPTLYYGDPGHSQPHRPPGPGGRKVGRIGGGRDGGMTALTARLDGLDMSGNTGGGEGFAKGGLPPGGPGGVRGGYGGGGGGGSRKGSYRMQQGGYGYSLHGGGGGGGRGGGAGGEGGYGGMYPPR 589
            MGGTEEPCKTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAKKAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRSSPARAEGRRMGGMGGGMEGGMGMAGYPAMYATVGPGAGGGGYYPPTSHLHPPHPQHPPTHSPQAPPTQSGYHYAPGPIPYPPSSSSYLPPYHPQQPSPAQAASLYHPSQGGGGTHPYTHLSYSYQSHLHAPPHSLPPLAPGQDRGGYPPGGFSPQGSPDGREGGREGLPTLYYGDPGHSQPHRPPGPGGRKVGRIGGGRDGGMTALTARLDGLDMSGNTGGGEGFAKGGLPPGGPGGVRGGYGGGGGGGSRKGSYRMQQGGYGYSLHGGGGGGGRGGGAGGEGGYGGMYPPR
Sbjct:    1 MGGTEEPCKTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAKKAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRSSPARAEGRRMGGMGGGMEGGMGMAGYPAMYATVGPGAGGGGYYPPTSHLHPPHPQHPPTHSPQAPPTQSGYHYAPGPIPYPPSSSSYLPPYHPQQPSPAQAASLYHPSQGGGGTHPYTHLSYSYQSHLHAPPHSLPPLAPGQDRGGYPPGGFSPQGSPDGREGGREGLPTLYYGDPGHSQPHRPPGPGGRKVGRIGGGRDGGMTALTARLDGLDMSGNTGGGEGFAKGGLPPGGPGGVRGGYGGGGGGGSRKGSYRMQQGGYGYSLHGGGGGGGRGGGAGGEGGYGGMYPPR 589
[Close]
BLAST of EWM27900.1 vs. NCBI_GenBank
Match: gi|970641637|gb|KUF83643.1| (Polyadenylate-binding protein RBP45A [Phytophthora nicotianae])

HSP 1 Score: 303.138 bits (775), Expect = 5.869e-94
Identity = 156/299 (52.17%), Postives = 198/299 (66.22%), Query Frame = 0 
Query:    5 EEPCKTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAK-KAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRSSPARA 302
            E  CKTLW+GDIQ  WDE ++ S+F  T   E  VV  KLIRDK TG+PAGYGF+EF T   A++VL+  NG  I  T  RFR+NWGAGG+R+ET+ + SIFVGDLAP+VTD++L + F  +F +  GAKVVMDPV+ MSKGFGFVRF ++EE ++AL TM GV C  R +RV+ AT + K+    G GMG                         E+  NTTVFVGG+D   TED LR  F   G+I+ VK+PPGRGCGFVQY ++ +AE AI++M G  + G KVR +WGRS+ ARA
Sbjct:    2 ETECKTLWMGDIQMHWDETFIASLF--TSAAEQPVV--KLIRDKVTGYPAGYGFLEFPTPRGAQQVLDAYNGQLIPNTMHRFRMNWGAGGRRIETSDDHSIFVGDLAPDVTDELLLNTFSARFTTVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATERNKSRQQVGFGMGE------------------------EEGTNTTVFVGGLDPSTTEDELRARFGALGEIVSVKVPPGRGCGFVQYTSKEAAEVAISQMNGTVISGVKVRCAWGRSAAARA 272
[Close]
BLAST of EWM27900.1 vs. NCBI_GenBank
Match: gi|675178937|ref|XP_008898353.1| (hypothetical protein PPTG_06213 [Phytophthora parasitica INRA-310] >gi|566008640|gb|ETI31551.1| hypothetical protein F443_21471 [Phytophthora parasitica P1569] >gi|567946133|gb|ETK71944.1| hypothetical protein L915_20875 [Phytophthora parasitica] >gi|567974794|gb|ETL25372.1| hypothetical protein L916_20759 [Phytophthora parasitica] >gi|568004273|gb|ETL78598.1| hypothetical protein L917_20608 [Phytophthora parasitica] >gi|568034182|gb|ETM31858.1| hypothetical protein L914_20628 [Phytophthora parasitica] >gi|568101270|gb|ETN15956.1| hypothetical protein PPTG_06213 [Phytophthora parasitica INRA-310] >gi|570312324|gb|ETO60272.1| hypothetical protein F444_21489 [Phytophthora parasitica P1976] >gi|570936106|gb|ETP01363.1| hypothetical protein F441_21358 [Phytophthora parasitica CJ01A1] >gi|570966408|gb|ETP29527.1| hypothetical protein F442_21307 [Phytophthora parasitica P10297])

HSP 1 Score: 302.753 bits (774), Expect = 8.727e-94
Identity = 156/299 (52.17%), Postives = 198/299 (66.22%), Query Frame = 0 
Query:    5 EEPCKTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAK-KAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRSSPARA 302
            E  CKTLW+GDIQ  WDE ++ S+F  T   E  VV  KLIRDK TG+PAGYGF+EF T   A++VL+  NG  I  T  RFR+NWGAGG+R+ET+ + SIFVGDLAP+VTD++L + F  +F +  GAKVVMDPV+ MSKGFGFVRF ++EE ++AL TM GV C  R +RV+ AT + K+    G GMG                         E+  NTTVFVGG+D   TED LR  F   G+I+ VK+PPGRGCGFVQY ++ +AE AI++M G  + G KVR +WGRS+ ARA
Sbjct:    2 ETECKTLWMGDIQMHWDETFIASLF--TSAAEQPVV--KLIRDKVTGYPAGYGFLEFPTPRGAQQVLDAYNGQLIPNTMHRFRMNWGAGGRRIETSDDHSIFVGDLAPDVTDELLLNTFSARFTTVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATERNKSRQQVGFGMGE------------------------EEGTNTTVFVGGLDPSTTEDELRARFGALGEIVSVKVPPGRGCGFVQYTSKEAAEVAISQMNGTVISGVKVRCAWGRSAAARA 272
[Close]
BLAST of EWM27900.1 vs. NCBI_GenBank
Match: gi|675178935|ref|XP_008898352.1| (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|566008641|gb|ETI31552.1| hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|567946134|gb|ETK71945.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567974795|gb|ETL25373.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568004274|gb|ETL78599.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568034183|gb|ETM31859.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568101271|gb|ETN15957.1| hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >gi|570312325|gb|ETO60273.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570936107|gb|ETP01364.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|570966409|gb|ETP29528.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 301.982 bits (772), Expect = 8.758e-94
Identity = 156/299 (52.17%), Postives = 198/299 (66.22%), Query Frame = 0 
Query:    5 EEPCKTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAK-KAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRSSPARA 302
            E  CKTLW+GDIQ  WDE ++ S+F  T   E  VV  KLIRDK TG+PAGYGF+EF T   A++VL+  NG  I  T  RFR+NWGAGG+R+ET+ + SIFVGDLAP+VTD++L + F  +F +  GAKVVMDPV+ MSKGFGFVRF ++EE ++AL TM GV C  R +RV+ AT + K+    G GMG                         E+  NTTVFVGG+D   TED LR  F   G+I+ VK+PPGRGCGFVQY ++ +AE AI++M G  + G KVR +WGRS+ ARA
Sbjct:    2 ETECKTLWMGDIQMHWDETFIASLF--TSAAEQPVV--KLIRDKVTGYPAGYGFLEFPTPRGAQQVLDAYNGQLIPNTMHRFRMNWGAGGRRIETSDDHSIFVGDLAPDVTDELLLNTFSARFTTVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATERNKSRQQVGFGMGE------------------------EEGTNTTVFVGGLDPSTTEDELRARFGALGEIVSVKVPPGRGCGFVQYTSKEAAEVAISQMNGTVISGVKVRCAWGRSAAARA 272
[Close]
BLAST of EWM27900.1 vs. NCBI_GenBank
Match: gi|635368772|emb|CCI43077.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 301.212 bits (770), Expect = 7.869e-93
Identity = 154/300 (51.33%), Postives = 202/300 (67.33%), Query Frame = 0 
Query:    5 EEPCKTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAKKAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRSSPARAEG 304
            +  CKTLW+GDIQ +WDEAY+GS+FA + +E+     +KLIRDK TG+PAGYGF+EF + + A+ VL T NG  +  T  RFRLNWGAGG+R++T  + SIFVGDLAPEV+D++L   F  +F S  GAKVV+DPV+ M KGFGFVRF ++ E ++AL TM GV C  R +RV+ AT +            G+M      P P  +P +  G   E+  NTTVF+GG+D   TED LR  F   G+I+ VK+PPGRGCGFVQYV + +A+ AI +M GA + G KVR +WGRS+ AR  G
Sbjct:    2 DADCKTLWMGDIQLNWDEAYIGSLFA-SAVEQP---SIKLIRDKVTGYPAGYGFLEFPSQQGAQAVLNTFNGQIVPNTIHRFRLNWGAGGRRIDTVEDHSIFVGDLAPEVSDELLLSTFSTRFSSVRGAKVVIDPVTRMPKGFGFVRFGDKGEADQALQTMNGVYCSSRPMRVSVATDRTKT--------RGIM------PPPISYPVVGTGNTEEEGANTTVFIGGLDPSTTEDDLRARFGVIGEIMSVKVPPGRGCGFVQYVTKDAADVAINQMNGALINGVKVRCAWGRSAAARLAG 283
[Close]
BLAST of EWM27900.1 vs. NCBI_GenBank
Match: gi|953503066|emb|CEG35834.1| (nuclear acid binding [Plasmopara halstedii])

HSP 1 Score: 299.671 bits (766), Expect = 1.239e-92
Identity = 153/299 (51.17%), Postives = 195/299 (65.22%), Query Frame = 0 
Query:    5 EEPCKTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAK-KAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRSSPARA 302
            E  CKTLW+GDIQ  WDE ++ S+FA+   +      VKLIRDK TG+PAGYGF+EF T   A++VLET NG  I  T  RFR+NWGAGG+R+ET+ + SIFVGDLAP+V D++L   F  +F +  GAKVVMDP++ MSKGFGFVRF ++EE ++AL TM GV C  R +RV+ AT + KA    G  M                          ED  NTTVFVGG+D G +E+ LR  F   G+I+ VK+PPGRGCGFVQY  + +AE AI++M G+ V G KVR +WGRS+ AR 
Sbjct:    2 ETECKTLWMGDIQMHWDETFIVSLFASAAEQPI----VKLIRDKVTGYPAGYGFLEFPTQRGAQQVLETFNGQLIPNTLHRFRMNWGAGGRRIETSDDHSIFVGDLAPDVADELLLSTFSARFTTVRGAKVVMDPITRMSKGFGFVRFGSKEEADQALQTMNGVFCSSRPMRVSVATERNKARQQLGFSMSE------------------------EDGANTTVFVGGLDPGTSEEELRTRFGALGEIVSVKVPPGRGCGFVQYTTKEAAEAAISQMNGSVVGGVKVRCAWGRSAAARV 272
[Close]
BLAST of EWM27900.1 vs. NCBI_GenBank
Match: gi|298706390|emb|CBJ29399.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 299.671 bits (766), Expect = 2.969e-92
Identity = 151/289 (52.25%), Postives = 189/289 (65.40%), Query Frame = 0 
Query:    9 KTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAKKAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRS 297
            KTLW+GD+QP W E YV S+F++     G  +EVKLIRD+H G  AGYGF++F   E A+ VL++ NG  I GT  R+RLNWGAGGKR+E APE+S+FVGDL+PEVTD  L+  FL K+ S LGAKVV +P++G SK FGF+RF +E+E++EAL+ M G  C GR IRVAPAT + +              G HA+                DP NTTVFVGGI+  VTE VLR+ F+  G+I  V  PPGRGC FV + +R SAE  I  MQG  V G  VRLSWG+S
Sbjct:   16 KTLWLGDVQPDWTEEYVESLFSSI---VGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDAELKATFLGKYTSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPATKRTSVQGQ---------TGAHAT----------------DPSNTTVFVGGINDSVTEKVLRDTFNSAGEIQTVTTPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSCVRLSWGKS 276
[Close]
BLAST of EWM27900.1 vs. NCBI_GenBank
Match: gi|325183868|emb|CCA18326.1| (conserved hypothetical protein [Albugo laibachii Nc14] >gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 298.13 bits (762), Expect = 1.205e-91
Identity = 153/300 (51.00%), Postives = 201/300 (67.00%), Query Frame = 0 
Query:    5 EEPCKTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAKKAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRSSPARAEG 304
            +  CKTLW+GDIQ +WDEAY+GS+FA + +E+     +KLIRDK TG+PAGYGF+EF + + A+ VL T NG  +  T  RFRLNWGAGG+R++T  + SIFVGDLAPEV+D++L   F  +F S  GAKVV+DPV+ M KGFGFVRF ++ E ++AL TM GV C  R +RV+ AT +            G+M      P P  +  +  G   E+  NTTVF+GG+D   TED LR  F   G+I+ VK+PPGRGCGFVQYV + +A+ AI +M GA + G KVR +WGRS+ AR  G
Sbjct:    2 DADCKTLWMGDIQLNWDEAYIGSLFA-SAVEQP---SIKLIRDKVTGYPAGYGFLEFPSQQGAQAVLNTFNGQIVPNTIHRFRLNWGAGGRRIDTVEDHSIFVGDLAPEVSDELLLSTFSTRFSSVRGAKVVIDPVTRMPKGFGFVRFGDKGEADQALQTMNGVYCSSRPMRVSVATDRTKT--------RGIM------PPPISYTVVGTGNTEEEGANTTVFIGGLDPSTTEDDLRARFGVIGEIMSVKVPPGRGCGFVQYVTKDAADVAINQMNGALINGVKVRCAWGRSAAARLAG 283
[Close]
BLAST of EWM27900.1 vs. NCBI_GenBank
Match: gi|635368771|emb|CCI43076.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 291.967 bits (746), Expect = 3.759e-89
Identity = 155/317 (48.90%), Postives = 203/317 (64.04%), Query Frame = 0 
Query:    5 EEPCKTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAI-----------------AGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAKKAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRSSPARAEG 304
            +  CKTLW+GDIQ +WDEAY+GS+FA + +E+     +KLIRDK TG+PAGYGF+EF + + A+ VL T NG  +                 A T  RFRLNWGAGG+R++T  + SIFVGDLAPEV+D++L   F  +F S  GAKVV+DPV+ M KGFGFVRF ++ E ++AL TM GV C  R +RV+ AT +            G+M      P P  +P +  G   E+  NTTVF+GG+D   TED LR  F   G+I+ VK+PPGRGCGFVQYV + +A+ AI +M GA + G KVR +WGRS+ AR  G
Sbjct:    2 DADCKTLWMGDIQLNWDEAYIGSLFA-SAVEQP---SIKLIRDKVTGYPAGYGFLEFPSQQGAQAVLNTFNGQIVRTCYHVDTLDSFDTCFVANTIHRFRLNWGAGGRRIDTVEDHSIFVGDLAPEVSDELLLSTFSTRFSSVRGAKVVIDPVTRMPKGFGFVRFGDKGEADQALQTMNGVYCSSRPMRVSVATDRTKT--------RGIM------PPPISYPVVGTGNTEEEGANTTVFIGGLDPSTTEDDLRARFGVIGEIMSVKVPPGRGCGFVQYVTKDAADVAINQMNGALINGVKVRCAWGRSAAARLAG 300
[Close]
BLAST of EWM27900.1 vs. NCBI_GenBank
Match: gi|695442420|ref|XP_009533450.1| (hypothetical protein PHYSODRAFT_520170 [Phytophthora sojae] >gi|348670884|gb|EGZ10705.1| hypothetical protein PHYSODRAFT_520170 [Phytophthora sojae])

HSP 1 Score: 286.189 bits (731), Expect = 1.183e-87
Identity = 147/285 (51.58%), Postives = 185/285 (64.91%), Query Frame = 0 
Query:    5 EEPCKTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEKFPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAKKAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCK 289
            E  CKTLW+GDIQ  WDE ++ S+FA+ G  E  VV  KLIRDK TG+PAGYGF+EF T   A++VL+T NG  I  T  RFR+NWGAGG+R+ET+ + SIFVGDLAP+VTD++L   F  +F S  GAKVVMDPV+ MSKGFGFVRF ++EE ++AL TM GV C  R +RV+ AT +  +   G                         G   E+  NTTVFVGG+D   TED LR  F   G+I+ VK+PPGRGCGFVQY ++ +AE AI +M G  + G K
Sbjct:    2 ETECKTLWMGDIQMHWDETFISSLFASAG--EQPVV--KLIRDKVTGYPAGYGFLEFPTQRGAQQVLDTYNGQVIPNTMHRFRMNWGAGGRRIETSDDHSIFVGDLAPDVTDELLLSTFNSRFTSVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATERSKSRQQG-----------------------AFGAPEEEGTNTTVFVGGLDPSTTEDELRARFGALGEIVSVKVPPGRGCGFVQYTSKEAAEVAITQMNGTVISGVK 259
The following BLAST results are available for this feature:
BLAST of EWM27900.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110236|gb|EWM27900.1|0.000e+0100.00nuclear acid binding protein [Nannochloropsis gadi... [more]
gi|970641637|gb|KUF83643.1|5.869e-9452.17Polyadenylate-binding protein RBP45A [Phytophthora... [more]
gi|675178937|ref|XP_008898353.1|8.727e-9452.17hypothetical protein PPTG_06213 [Phytophthora para... [more]
gi|675178935|ref|XP_008898352.1|8.758e-9452.17hypothetical protein, variant 1 [Phytophthora para... [more]
gi|635368772|emb|CCI43077.1|7.869e-9351.33unnamed protein product [Albugo candida][more]
gi|953503066|emb|CEG35834.1|1.239e-9251.17nuclear acid binding [Plasmopara halstedii][more]
gi|298706390|emb|CBJ29399.1|2.969e-9252.25conserved unknown protein [Ectocarpus siliculosus][more]
gi|325183868|emb|CCA18326.1|1.205e-9151.00conserved hypothetical protein [Albugo laibachii N... [more]
gi|635368771|emb|CCI43076.1|3.759e-8948.90unnamed protein product [Albugo candida][more]
gi|695442420|ref|XP_009533450.1|1.183e-8751.58hypothetical protein PHYSODRAFT_520170 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2782rna2782Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications