EWM27961.1, cds2702 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27961.1 vs. NCBI_GenBank
Match: gi|585110302|gb|EWM27961.1| (pre-mrna cleavage complex 2 protein [Nannochloropsis gaditana]) HSP 1 Score: 1505.35 bits (3896), Expect = 0.000e+0 Identity = 745/745 (100.00%), Postives = 745/745 (100.00%), Query Frame = 0
Query: 1 MAAPPPTSPLGVFQEDMGRLGGHPDKDIIVRLTHIAMQHQDLGNDLVELIQSRVLSSHTPPAFRLPLCYLMDSILQNIRGQYIPLFSRYAVAMCCRTYEEGSDRDRQCISKLLRLWRERQVFEAAVLDPIDVHLARIERVGREKASGTRAMAVSGHTGVGVGEKRKLPPLQSPAPPVPPSARLSPRLSPPPSPPPDLGRNGESDGSRLRKDPRRQPAHLSSGPSDKLRGPPPPAPPPPPRVPQAAIPAPDPSQPRPRPSSTTTQSLQFILAVDREMKSMLEKLLQEMGEAKMTIEELARRNPRAAEQLKKAAEVTVASRLHSEAQNAVDALDAVGPFALPPVDRDMWVKGGQVAARLQKAVSDAGPAPVKAGLIRAAQETASQVKAMINILMQHQGLPPLPHHNPASAPAPRPPPPPPPPPPPPPPPPHQPSQPYALQTMAQKLAEALLNQQQRQPQYSQQHLQQQVPPNVPPSSIPLSQQQQQQPPAPHQALLQQDQKQQQLSRQQQGKQYILIKLYSGEQCKEDGLRFSSPTSLQDHEAWLAKVHKLALAAAGKGTTQTEVLLRSRPWFCTIDAWSKEALPSERAESLASRISHLNLRQKGRSVGQKMDGRKGIDGGHGDNEAENLAHCVPVDDGFSGCALCGEPFDQFWEDASSEWMYRNAIPVAIVEGECVPVSSDTAVESGESTRHLVHWLCYEACDRREAARMLQKPGDTSTTTASHGGNGDDAKGALSLEKKPEAVGV 745
MAAPPPTSPLGVFQEDMGRLGGHPDKDIIVRLTHIAMQHQDLGNDLVELIQSRVLSSHTPPAFRLPLCYLMDSILQNIRGQYIPLFSRYAVAMCCRTYEEGSDRDRQCISKLLRLWRERQVFEAAVLDPIDVHLARIERVGREKASGTRAMAVSGHTGVGVGEKRKLPPLQSPAPPVPPSARLSPRLSPPPSPPPDLGRNGESDGSRLRKDPRRQPAHLSSGPSDKLRGPPPPAPPPPPRVPQAAIPAPDPSQPRPRPSSTTTQSLQFILAVDREMKSMLEKLLQEMGEAKMTIEELARRNPRAAEQLKKAAEVTVASRLHSEAQNAVDALDAVGPFALPPVDRDMWVKGGQVAARLQKAVSDAGPAPVKAGLIRAAQETASQVKAMINILMQHQGLPPLPHHNPASAPAPRPPPPPPPPPPPPPPPPHQPSQPYALQTMAQKLAEALLNQQQRQPQYSQQHLQQQVPPNVPPSSIPLSQQQQQQPPAPHQALLQQDQKQQQLSRQQQGKQYILIKLYSGEQCKEDGLRFSSPTSLQDHEAWLAKVHKLALAAAGKGTTQTEVLLRSRPWFCTIDAWSKEALPSERAESLASRISHLNLRQKGRSVGQKMDGRKGIDGGHGDNEAENLAHCVPVDDGFSGCALCGEPFDQFWEDASSEWMYRNAIPVAIVEGECVPVSSDTAVESGESTRHLVHWLCYEACDRREAARMLQKPGDTSTTTASHGGNGDDAKGALSLEKKPEAVGV
Sbjct: 1 MAAPPPTSPLGVFQEDMGRLGGHPDKDIIVRLTHIAMQHQDLGNDLVELIQSRVLSSHTPPAFRLPLCYLMDSILQNIRGQYIPLFSRYAVAMCCRTYEEGSDRDRQCISKLLRLWRERQVFEAAVLDPIDVHLARIERVGREKASGTRAMAVSGHTGVGVGEKRKLPPLQSPAPPVPPSARLSPRLSPPPSPPPDLGRNGESDGSRLRKDPRRQPAHLSSGPSDKLRGPPPPAPPPPPRVPQAAIPAPDPSQPRPRPSSTTTQSLQFILAVDREMKSMLEKLLQEMGEAKMTIEELARRNPRAAEQLKKAAEVTVASRLHSEAQNAVDALDAVGPFALPPVDRDMWVKGGQVAARLQKAVSDAGPAPVKAGLIRAAQETASQVKAMINILMQHQGLPPLPHHNPASAPAPRPPPPPPPPPPPPPPPPHQPSQPYALQTMAQKLAEALLNQQQRQPQYSQQHLQQQVPPNVPPSSIPLSQQQQQQPPAPHQALLQQDQKQQQLSRQQQGKQYILIKLYSGEQCKEDGLRFSSPTSLQDHEAWLAKVHKLALAAAGKGTTQTEVLLRSRPWFCTIDAWSKEALPSERAESLASRISHLNLRQKGRSVGQKMDGRKGIDGGHGDNEAENLAHCVPVDDGFSGCALCGEPFDQFWEDASSEWMYRNAIPVAIVEGECVPVSSDTAVESGESTRHLVHWLCYEACDRREAARMLQKPGDTSTTTASHGGNGDDAKGALSLEKKPEAVGV 745
BLAST of EWM27961.1 vs. NCBI_GenBank
Match: gi|585110303|gb|EWM27962.1| (pre-mrna cleavage complex 2 protein [Nannochloropsis gaditana]) HSP 1 Score: 1392.48 bits (3603), Expect = 0.000e+0 Identity = 689/689 (100.00%), Postives = 689/689 (100.00%), Query Frame = 0
Query: 57 SHTPPAFRLPLCYLMDSILQNIRGQYIPLFSRYAVAMCCRTYEEGSDRDRQCISKLLRLWRERQVFEAAVLDPIDVHLARIERVGREKASGTRAMAVSGHTGVGVGEKRKLPPLQSPAPPVPPSARLSPRLSPPPSPPPDLGRNGESDGSRLRKDPRRQPAHLSSGPSDKLRGPPPPAPPPPPRVPQAAIPAPDPSQPRPRPSSTTTQSLQFILAVDREMKSMLEKLLQEMGEAKMTIEELARRNPRAAEQLKKAAEVTVASRLHSEAQNAVDALDAVGPFALPPVDRDMWVKGGQVAARLQKAVSDAGPAPVKAGLIRAAQETASQVKAMINILMQHQGLPPLPHHNPASAPAPRPPPPPPPPPPPPPPPPHQPSQPYALQTMAQKLAEALLNQQQRQPQYSQQHLQQQVPPNVPPSSIPLSQQQQQQPPAPHQALLQQDQKQQQLSRQQQGKQYILIKLYSGEQCKEDGLRFSSPTSLQDHEAWLAKVHKLALAAAGKGTTQTEVLLRSRPWFCTIDAWSKEALPSERAESLASRISHLNLRQKGRSVGQKMDGRKGIDGGHGDNEAENLAHCVPVDDGFSGCALCGEPFDQFWEDASSEWMYRNAIPVAIVEGECVPVSSDTAVESGESTRHLVHWLCYEACDRREAARMLQKPGDTSTTTASHGGNGDDAKGALSLEKKPEAVGV 745
SHTPPAFRLPLCYLMDSILQNIRGQYIPLFSRYAVAMCCRTYEEGSDRDRQCISKLLRLWRERQVFEAAVLDPIDVHLARIERVGREKASGTRAMAVSGHTGVGVGEKRKLPPLQSPAPPVPPSARLSPRLSPPPSPPPDLGRNGESDGSRLRKDPRRQPAHLSSGPSDKLRGPPPPAPPPPPRVPQAAIPAPDPSQPRPRPSSTTTQSLQFILAVDREMKSMLEKLLQEMGEAKMTIEELARRNPRAAEQLKKAAEVTVASRLHSEAQNAVDALDAVGPFALPPVDRDMWVKGGQVAARLQKAVSDAGPAPVKAGLIRAAQETASQVKAMINILMQHQGLPPLPHHNPASAPAPRPPPPPPPPPPPPPPPPHQPSQPYALQTMAQKLAEALLNQQQRQPQYSQQHLQQQVPPNVPPSSIPLSQQQQQQPPAPHQALLQQDQKQQQLSRQQQGKQYILIKLYSGEQCKEDGLRFSSPTSLQDHEAWLAKVHKLALAAAGKGTTQTEVLLRSRPWFCTIDAWSKEALPSERAESLASRISHLNLRQKGRSVGQKMDGRKGIDGGHGDNEAENLAHCVPVDDGFSGCALCGEPFDQFWEDASSEWMYRNAIPVAIVEGECVPVSSDTAVESGESTRHLVHWLCYEACDRREAARMLQKPGDTSTTTASHGGNGDDAKGALSLEKKPEAVGV
Sbjct: 38 SHTPPAFRLPLCYLMDSILQNIRGQYIPLFSRYAVAMCCRTYEEGSDRDRQCISKLLRLWRERQVFEAAVLDPIDVHLARIERVGREKASGTRAMAVSGHTGVGVGEKRKLPPLQSPAPPVPPSARLSPRLSPPPSPPPDLGRNGESDGSRLRKDPRRQPAHLSSGPSDKLRGPPPPAPPPPPRVPQAAIPAPDPSQPRPRPSSTTTQSLQFILAVDREMKSMLEKLLQEMGEAKMTIEELARRNPRAAEQLKKAAEVTVASRLHSEAQNAVDALDAVGPFALPPVDRDMWVKGGQVAARLQKAVSDAGPAPVKAGLIRAAQETASQVKAMINILMQHQGLPPLPHHNPASAPAPRPPPPPPPPPPPPPPPPHQPSQPYALQTMAQKLAEALLNQQQRQPQYSQQHLQQQVPPNVPPSSIPLSQQQQQQPPAPHQALLQQDQKQQQLSRQQQGKQYILIKLYSGEQCKEDGLRFSSPTSLQDHEAWLAKVHKLALAAAGKGTTQTEVLLRSRPWFCTIDAWSKEALPSERAESLASRISHLNLRQKGRSVGQKMDGRKGIDGGHGDNEAENLAHCVPVDDGFSGCALCGEPFDQFWEDASSEWMYRNAIPVAIVEGECVPVSSDTAVESGESTRHLVHWLCYEACDRREAARMLQKPGDTSTTTASHGGNGDDAKGALSLEKKPEAVGV 726 The following BLAST results are available for this feature:
BLAST of EWM27961.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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