EWM27996.1, cds2672 (CDS) Nannochloropsis gaditana

Overview
NameEWM27996.1
Unique Namecds2672
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:950310..950485 +
Alignment locationCM002459.1:950737..952756 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27996.1
Productfha domain protein
Orig transcript idgnl|cribi|Naga_100008g49.7888.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:950310..950485 +
CM002459.1supercontigCM002459.1:950737..952756 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR008984SMAD_FHA_domain
IPR013083Znf_RING/FYVE/PHD
IPR011016Znf_RING-CH
IPR000253FHA_dom
Homology
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|585110337|gb|EWM27996.1| (fha domain protein [Nannochloropsis gaditana])

HSP 1 Score: 1491.86 bits (3861), Expect = 0.000e+0
Identity = 731/731 (100.00%), Postives = 731/731 (100.00%), Query Frame = 0
Query:    1 MGVASSTMGAASSSAQDGSSDRMDVEGVSGGSSGHSMAASQRWSRSSLRMTGGDDTAMSVQVKIMPLVPGTATRDVKTCKITSAGAVLEGKMSPEIRNIAREYERAMGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQGIGGAGGRLTVLRGIEGGRGAGEAGAPSRQGQGPGSLPDGGNLPMMGEEDGRGTSSSGKAGRNRRSSRGSITEKDLFYLREDAGEIRQDLFAQEEAATAVQEGLAATALGLSPGRSPRVALCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSENKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARRSWMRGRLSSMTGTGAEVATLGREEEEVSEASREKRRSSSANPSGAMSVDGLINEGMGERHTNDTVATQACERGQGTPSSHVLNAAHLQLLESLCSIEMTPRQQMLDREDSASSLPSCEQTAGRTSSLACTSGALGAAFLQMHLRGDSSSGGLTQMGKGTKEGLGEEGGVQGDGPVRSARGRGEEAGSRGAVGSILNAPGPQGVRGRSVRFVPAESPIADSLASQLDA 731
            MGVASSTMGAASSSAQDGSSDRMDVEGVSGGSSGHSMAASQRWSRSSLRMTGGDDTAMSVQVKIMPLVPGTATRDVKTCKITSAGAVLEGKMSPEIRNIAREYERAMGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQGIGGAGGRLTVLRGIEGGRGAGEAGAPSRQGQGPGSLPDGGNLPMMGEEDGRGTSSSGKAGRNRRSSRGSITEKDLFYLREDAGEIRQDLFAQEEAATAVQEGLAATALGLSPGRSPRVALCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSENKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARRSWMRGRLSSMTGTGAEVATLGREEEEVSEASREKRRSSSANPSGAMSVDGLINEGMGERHTNDTVATQACERGQGTPSSHVLNAAHLQLLESLCSIEMTPRQQMLDREDSASSLPSCEQTAGRTSSLACTSGALGAAFLQMHLRGDSSSGGLTQMGKGTKEGLGEEGGVQGDGPVRSARGRGEEAGSRGAVGSILNAPGPQGVRGRSVRFVPAESPIADSLASQLDA
Sbjct:    1 MGVASSTMGAASSSAQDGSSDRMDVEGVSGGSSGHSMAASQRWSRSSLRMTGGDDTAMSVQVKIMPLVPGTATRDVKTCKITSAGAVLEGKMSPEIRNIAREYERAMGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQGIGGAGGRLTVLRGIEGGRGAGEAGAPSRQGQGPGSLPDGGNLPMMGEEDGRGTSSSGKAGRNRRSSRGSITEKDLFYLREDAGEIRQDLFAQEEAATAVQEGLAATALGLSPGRSPRVALCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSENKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARRSWMRGRLSSMTGTGAEVATLGREEEEVSEASREKRRSSSANPSGAMSVDGLINEGMGERHTNDTVATQACERGQGTPSSHVLNAAHLQLLESLCSIEMTPRQQMLDREDSASSLPSCEQTAGRTSSLACTSGALGAAFLQMHLRGDSSSGGLTQMGKGTKEGLGEEGGVQGDGPVRSARGRGEEAGSRGAVGSILNAPGPQGVRGRSVRFVPAESPIADSLASQLDA 731          
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|298708564|emb|CBJ30649.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 253.832 bits (647), Expect = 7.825e-71
Identity = 127/273 (46.52%), Postives = 173/273 (63.37%), Query Frame = 0
Query:  264 ITEKDLFYLREDAGEIRQDLFAQEEAATAVQEGLAATALG--LSPGRSPRVA--LCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFS---------ENKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARRSWMRGRLSSMTGTGAEVAT 523
            ++ ++L  L+ D   I++DL   E A TA +E   A  L   L  G    V   +CYMCFDD D   NPLVAPC CKG TRYVHL+CL+ W  +  + K CV+ + +    C +CK+ YK  VR   G  + L +  LPPP+ICF+VVT+H   EELF+T++QLSF+           K++++GRSR C MVLDYRTVST+HA V ++ G FYF DL SSNGS L LR P++LPY + V +++G ++V+ KA+RS +R RLSS+ G  A V  
Sbjct:  356 LSWEELTCLKGDIAAIQKDLVTIE-ALTAQEENAEADKLTGVLQNGGGGVVNTRMCYMCFDDVDEPGNPLVAPCECKGDTRYVHLNCLQKWHTTTSENKVCVVLNNKGVRVCTVCKSPYKASVRLPGGESISLFQSPLPPPYICFMVVTRHQNNEELFSTKYQLSFNSVMNRGGTASTKELVVGRSRQCDMVLDYRTVSTRHANVRFQGGRFYFSDLMSSNGSYLYLREPLQLPYGETVFLKWGSNVVSLKAKRSSIRHRLSSLVGRRATVTN 627          

HSP 2 Score: 92.8189 bits (229), Expect = 6.983e-16
Identity = 58/152 (38.16%), Postives = 83/152 (54.61%), Query Frame = 0
Query:   54 DDTAMSVQVKIMPLVPG--TATRDVKTCKITSAGAVLEGKMS-PEIR---------NIAREYERAMGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDK----HQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGE 189
            D     V+V +    PG  T    +   +I+S G  + G ++  E R         +IA EYE+  G  + R  I D RA+QL+VV   + F  V APE FSRH+GTC +LG +    +  +  Y L++G+FLRIGSVG++VSE+  G  GE
Sbjct:  201 DHKGAHVEVSVFKYQPGVQTPVEQLHNYRISSRGGAITGSLTQTEERRGENVSGSVDIAAEYEKRKGSQVVRHHIKDHRAKQLLVVPNDDKFVAVAAPEAFSRHSGTCMILGGQGAYGNGTSKSYELKLGNFLRIGSVGVVVSEIHTGAGGE 352          
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|635370705|emb|CCI41142.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 219.55 bits (558), Expect = 3.399e-57
Identity = 147/434 (33.87%), Postives = 217/434 (50.00%), Query Frame = 0
Query:  116 IDDRRAQQLMVV---CVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGE----VESQGIGGAGGRLTVL---------RGIEGGRGAGEAGAPS-----RQGQGPGSLPDGGNLPMMG---EEDGRGTSSSGKAGRNRRSSRGSITEKDLFYLREDAGEIRQD--LFAQ---EEAATAVQEGLAATALGLSPGRSPRVALCYMCFD-DEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDE--------KDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDA---AEELFNTQFQLSF----SENKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARR 504
            +DD RA  L V     VG+ F    + E FS HTG C+VLG K    + + L +GD +RIGSVGL+V+EL+  +E E    +    +     R   +           +E  +   ++G  S      +G   G   +     M G   EE+        + G    S  G   +     +R ++ EI  D   F Q    +A + +      T+       S     CY+C+D D D  +NPLVAPC C+G T+Y+HL CL+ W  +  +E        + CV+T+ +    C ICK  Y    R  DGR++ LL   L PPF+ F VVT H+A      L NT+FQLSF    S  +++ IGRS + HM++ YRTVS  HA V++++  FY  D SSSNG+ML L RPM+L +N+   ++ GR+I+  +A++
Sbjct:  159 LDDTRASSLDVCYDDAVGK-FVCGASIERFSGHTGVCKVLGSKRYTPVQHRLRLGDLIRIGSVGLVVTELNRSEEDENTESLTPHDLEILKARFLSVPLQQTFNTGLSMEQAKEESDSGRSSEECDFNEGDCEGQKQENERERMEGRNSEENDECNELKLQPGNGETSDEGDYEDA----VRVESIEIDDDPSSFVQVCDRDACSLIHPNSRRTSTHAPHDVSRLKRFCYICYDEDADVQNNPLVAPCACRGDTKYLHLKCLKRWNHNLNEEGHDPNPQRRMCVVTNLDGLHLCTICKTPYALSARLEDGRVISLLPDKLKPPFVTFAVVTPHEARSRVNVLTNTRFQLSFAGLPSNQQELTIGRSTSNHMMVRYRTVSQLHAKVSFKENEFYLNDASSSNGTMLFLSRPMELEWNEPTHVKIGRTILTMRAKK 587          
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|1072231616|gb|OEU16348.1| (hypothetical protein FRACYDRAFT_169414 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 211.846 bits (538), Expect = 3.474e-57
Identity = 95/214 (44.39%), Postives = 136/214 (63.55%), Query Frame = 0
Query:  314 LCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSE---------NKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARRSWMRGRLSSMTGTG 518
            +CYMCFD+ED+ +NPL+ PC C G T +VH+ CLR W  +  D + C L+S +   TC +C++ +K+  +  DGR + L +  L PP++  LV TKH+ A+ LFNT+FQLSFS           + +L+GRS    MVLDYRTVS +HA++ ++ G F F D  SSNGS L LRRP++L  +Q V+ R GRS+++ K    W R  L ++  TG
Sbjct:  142 ICYMCFDEEDTEANPLITPCKCIGDTAHVHVECLRKWHTAEADNQVCFLSSVD--ATCSVCRSTFKSDFKLKDGRQMKLFKSSLEPPYVSLLVATKHEMAQRLFNTRFQLSFSTLMKADGKNATRPLLLGRSSGSDMVLDYRTVSARHASIRFKNGEFIFTDAGSSNGSYLYLRRPLELSPSQSVQFRLGRSMISMKVVNKWNRRLLRAVRRTG 353          

HSP 2 Score: 90.5077 bits (223), Expect = 2.109e-15
Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 0
Query:  107 MGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQ 193
            +G  L R  + D RA QL+V    + F++VPAPE FSRH+GTCR+LGD+      + L+VGDFLR+GSVG++V E   G E  V S+
Sbjct:    3 VGRKLQRYELSDTRACQLLVTTHAKSFWVVPAPEAFSRHSGTCRLLGDRKHPPAPHTLQVGDFLRVGSVGVVVIETHNGIENRVLSE 89          
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|325192047|emb|CCA26511.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 219.164 bits (557), Expect = 3.700e-57
Identity = 153/452 (33.85%), Postives = 223/452 (49.34%), Query Frame = 0
Query:  116 IDDRRAQQLMVV---CVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQGIGGAGGRLTVLRGIEGGRGAGEAGAPSRQGQGPGSLPDGGNLPMMGEEDGRGTSS-------------SGKAGRNRRSSRGS--ITEKDLFYLREDAGEIRQDLFAQEEA---ATAVQEGLAATAL----------GLSPGRSPRVA-LCYMCFD-DEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDE--------KDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDA---AEELFNTQFQLSF----SENKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARR--SWMRGRLSSMTGT 517
            +DD RA  L V     VG+ F    + E FS HTG C+VLG K    + + L +GD +RIGSVGL+V+EL+  ++ E  ++ +      L +L+       A     P +Q     +   G ++  + EE   G SS               +  RNR   R +  I E D   L    GE   +    +     +  +++ LAA                P    +V   CY+C+D D D  +NPLVAPC C+G T+Y+HL CL+ W  +  +E        + CV+T+ +    C ICK  Y    R  DGR++ LL   L PPF+ F VVT H+A      L NT+FQLSF    S  +++ IGRS + HM++ YRTVS  HA V +++  FY  D SSSNG+ML L RPM+L +N+   ++ GR+I+  +A++   W        T T
Sbjct:  154 LDDTRASSLDVCYDDTVGK-FVCGASVERFSGHTGVCKVLGSKRYAPVQHQLRLGDLIRIGSVGLVVTELNRTEQDE-NTESLTPHD--LEILK-------ARFLSVPLQQ-----TFNTGLSMEQVKEESDSGRSSEECDFNEGDREDQKQENERNRLEDRDNDEIEECDELKLHPGNGETSDEGDFDDAVRGESIGIEDNLAACKQICDQNSRRGSAQPPNDIFKVKRFCYICYDEDADIQNNPLVAPCACRGDTKYLHLKCLKRWNHNLNEEGHDPNPQRRMCVVTNLDGLHLCTICKTPYALSTRLEDGRVISLLPDKLMPPFVTFAVVTPHEARSRVNVLTNTRFQLSFAGLPSNQQELTIGRSTSNHMMVRYRTVSQLHAKVNFKQNEFYLNDASSSNGTMLFLSRPMELEWNEPTHVKIGRTILTMRAKKKLKWTDANFGESTYT 589          
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|325192046|emb|CCA26510.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 219.55 bits (558), Expect = 3.705e-57
Identity = 153/452 (33.85%), Postives = 223/452 (49.34%), Query Frame = 0
Query:  116 IDDRRAQQLMVV---CVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQGIGGAGGRLTVLRGIEGGRGAGEAGAPSRQGQGPGSLPDGGNLPMMGEEDGRGTSS-------------SGKAGRNRRSSRGS--ITEKDLFYLREDAGEIRQDLFAQEEA---ATAVQEGLAATAL----------GLSPGRSPRVA-LCYMCFD-DEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDE--------KDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDA---AEELFNTQFQLSF----SENKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARR--SWMRGRLSSMTGT 517
            +DD RA  L V     VG+ F    + E FS HTG C+VLG K    + + L +GD +RIGSVGL+V+EL+  ++ E  ++ +      L +L+       A     P +Q     +   G ++  + EE   G SS               +  RNR   R +  I E D   L    GE   +    +     +  +++ LAA                P    +V   CY+C+D D D  +NPLVAPC C+G T+Y+HL CL+ W  +  +E        + CV+T+ +    C ICK  Y    R  DGR++ LL   L PPF+ F VVT H+A      L NT+FQLSF    S  +++ IGRS + HM++ YRTVS  HA V +++  FY  D SSSNG+ML L RPM+L +N+   ++ GR+I+  +A++   W        T T
Sbjct:  156 LDDTRASSLDVCYDDTVGK-FVCGASVERFSGHTGVCKVLGSKRYAPVQHQLRLGDLIRIGSVGLVVTELNRTEQDE-NTESLTPHD--LEILK-------ARFLSVPLQQ-----TFNTGLSMEQVKEESDSGRSSEECDFNEGDREDQKQENERNRLEDRDNDEIEECDELKLHPGNGETSDEGDFDDAVRGESIGIEDNLAACKQICDQNSRRGSAQPPNDIFKVKRFCYICYDEDADIQNNPLVAPCACRGDTKYLHLKCLKRWNHNLNEEGHDPNPQRRMCVVTNLDGLHLCTICKTPYALSTRLEDGRVISLLPDKLMPPFVTFAVVTPHEARSRVNVLTNTRFQLSFAGLPSNQQELTIGRSTSNHMMVRYRTVSQLHAKVNFKQNEFYLNDASSSNGTMLFLSRPMELEWNEPTHVKIGRTILTMRAKKKLKWTDANFGESTYT 591          
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|1210523189|dbj|GAX17826.1| (hypothetical protein FisN_18Hh026 [Fistulifera solaris])

HSP 1 Score: 214.157 bits (544), Expect = 6.641e-57
Identity = 96/212 (45.28%), Postives = 134/212 (63.21%), Query Frame = 0
Query:  314 LCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSE---------NKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARRSWMRGRLSSMTG 516
            +CYMCFD+ED+  NP++ PC C G T+YVH+ CLR W  +  D + C L+S +   TC +CK+ +K+  +  DGR + L +  L PP+I  LV TKH+ A+ LFNT+FQLSFS           + +L+GRS    MVLDYRTVS +HA + ++ G F F D  SSNGS L LRRP++L  +Q V+ R GRS+++ K    W R  L ++ G
Sbjct:  278 VCYMCFDEEDTDENPMITPCKCSGDTKYVHVECLRKWHTAEADNQICFLSSVD--ATCSVCKSSFKSDFKLKDGRQVKLFKSSLEPPYISLLVATKHEMAQRLFNTRFQLSFSTLMKPDGRNATRPLLLGRSSGSDMVLDYRTVSARHAAIRFKNGEFIFTDAGSSNGSYLYLRRPLELSLSQPVQFRLGRSMISMKVTNKWNRRLLRAVRG 487          

HSP 2 Score: 99.7525 bits (247), Expect = 4.476e-18
Identity = 56/139 (40.29%), Postives = 82/139 (58.99%), Query Frame = 0
Query:   60 VQVKIMPLVPGTA--TRDVKTCKITSAGAVLEGKMSPEIR---NIAREYERAMGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQ 193
            V+VK+ P     A   +   +  I   G +++G  S   R   ++  EY + +G  L R  + D RA QL+V   G+ F++VPAPE FSRH+GTCR+LGD+      + L+VGDFLR+GSVG++V E   G E +V S+
Sbjct:   87 VEVKVYPCNNSQAGGKKKFTSFTIKPEGVIIQG--SNRHRSGVDLGAEYAQHVGRKLQRYELSDTRACQLLVTTHGKSFWVVPAPEAFSRHSGTCRLLGDRKHPPASHTLQVGDFLRVGSVGVVVIETHDGVENKVLSE 223          
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|1210521082|dbj|GAX20088.1| (hypothetical protein FisN_18Lh026 [Fistulifera solaris])

HSP 1 Score: 213.772 bits (543), Expect = 1.026e-56
Identity = 96/212 (45.28%), Postives = 134/212 (63.21%), Query Frame = 0
Query:  314 LCYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSE---------NKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIVAFKARRSWMRGRLSSMTG 516
            +CYMCFD+ED+  NP++ PC C G T+YVH+ CLR W  +  D + C L+S +   TC +CK+ +K+  +  DGR + L +  L PP+I  LV TKH+ A+ LFNT+FQLSFS           + +L+GRS    MVLDYRTVS +HA + ++ G F F D  SSNGS L LRRP++L  +Q V+ R GRS+++ K    W R  L ++ G
Sbjct:  279 VCYMCFDEEDTDENPMITPCKCSGDTKYVHVECLRKWHTAEADNQICFLSSVD--ATCSVCKSSFKSDFKLKDGRQVKLFKSSLEPPYISLLVATKHEMAQRLFNTRFQLSFSTLMKPDGRNATRPLLLGRSSGSDMVLDYRTVSARHAAIRFKNGEFIFTDAGSSNGSYLYLRRPLELSPSQPVQFRLGRSMISMKVTNKWNRRLLRAVRG 488          

HSP 2 Score: 100.908 bits (250), Expect = 1.824e-18
Identity = 56/141 (39.72%), Postives = 81/141 (57.45%), Query Frame = 0
Query:   60 VQVKIMPLVPGTA--TRDVKTCKITSAGAVLEGKMSPEIRN-----IAREYERAMGHSLPRIPIDDRRAQQLMVVCVGEDFYLVPAPELFSRHTGTCRVLGDKHQRTMDYHLEVGDFLRIGSVGLIVSELDPGQEGEVESQ 193
            V+VK+ P     A   +   +  I   G +++G      RN     +  EY + +G  L R  + D RA QL+V   G+ F++VPAPE FSRH+GTCR+LGD+      + L+VGDFLR+GSVG++V E   G E +V S+
Sbjct:   88 VEVKVYPCNNSQAGGKKKFTSFTIKPEGVIIQGSN----RNRSGVDLGTEYAQYVGRKLQRYELSDTRACQLLVTTHGKSFWVVPAPEAFSRHSGTCRLLGDRKHPPASHTLQVGDFLRVGSVGVVVIETHDGLENKVLSE 224          
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|223998612|ref|XP_002288979.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220976087|gb|EED94415.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 199.134 bits (505), Expect = 5.408e-56
Identity = 92/193 (47.67%), Postives = 127/193 (65.80%), Query Frame = 0
Query:  315 CYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSE---------NKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIV 498
            CYMCFD+ED++ NP++ PC C G TRYVH+ CLR W  +  D + C L+S +   TC +CK+ +++  +  DGRL+ L +  L PP++  LV TKH+ A+ LFNT+FQLSFS           + +L+GRS    MVLDYRTVS +HAT+  + G F F D  SSNGS L LRRP++L  +Q V+ R GRS++
Sbjct:    1 CYMCFDEEDTAENPMITPCKCLGDTRYVHVDCLRKWHTAEADNQVCFLSSVD--ATCSVCKSTFRSDFKLKDGRLVKLFKSSLEPPYVSLLVATKHEMAQRLFNTRFQLSFSTLLKPDGRNGTRPLLLGRSSGSDMVLDYRTVSARHATIRLKNGEFIFTDAGSSNGSYLYLRRPVELTPSQSVQFRLGRSMI 191          
BLAST of EWM27996.1 vs. NCBI_GenBank
Match: gi|219119727|ref|XP_002180617.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408090|gb|EEC48025.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 197.593 bits (501), Expect = 2.170e-55
Identity = 91/193 (47.15%), Postives = 126/193 (65.28%), Query Frame = 0
Query:  315 CYMCFDDEDSSSNPLVAPCLCKGGTRYVHLSCLRTWQASAGDEKDCVLTSAEMKTTCKICKAKYKTHVRTGDGRLLPLLEHHLPPPFICFLVVTKHDAAEELFNTQFQLSFSE---------NKQILIGRSRNCHMVLDYRTVSTQHATVTYRKGGFYFRDLSSSNGSMLNLRRPMKLPYNQWVRIRYGRSIV 498
            CYMCFD+EDS  NP++ PC C G T+YVH+ CLR W  +  D + C L+S +   TC +CK+ +K+  +  DGR L L +  L PP++  LV TKH+ A+ LFNT+FQLSFS           + +L+GRS    MVLDYRTVS +HA++ ++ G F F D  SSNGS L LR+P++L  +Q V+ R GRS++
Sbjct:    1 CYMCFDEEDSEENPMITPCKCSGDTKYVHVDCLRKWHTAEADNQICFLSSVD--ATCSVCKSTFKSDFKLKDGRHLKLFKSSLEPPYVSLLVATKHEMAQRLFNTRFQLSFSTLMKPDGKNATRPLLLGRSSGSDMVLDYRTVSARHASIRFKNGEFIFTDGGSSNGSYLYLRKPLELSPSQAVQFRLGRSMI 191          
The following BLAST results are available for this feature:
BLAST of EWM27996.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110337|gb|EWM27996.1|0.000e+0100.00fha domain protein [Nannochloropsis gaditana][more]
gi|298708564|emb|CBJ30649.1|7.825e-7146.52conserved unknown protein [Ectocarpus siliculosus][more]
gi|635370705|emb|CCI41142.1|3.399e-5733.87unnamed protein product [Albugo candida][more]
gi|1072231616|gb|OEU16348.1|3.474e-5744.39hypothetical protein FRACYDRAFT_169414 [Fragilario... [more]
gi|325192047|emb|CCA26511.1|3.700e-5733.85conserved hypothetical protein [Albugo laibachii N... [more]
gi|325192046|emb|CCA26510.1|3.705e-5733.85conserved hypothetical protein [Albugo laibachii N... [more]
gi|1210523189|dbj|GAX17826.1|6.641e-5745.28hypothetical protein FisN_18Hh026 [Fistulifera sol... [more]
gi|1210521082|dbj|GAX20088.1|1.026e-5645.28hypothetical protein FisN_18Lh026 [Fistulifera sol... [more]
gi|223998612|ref|XP_002288979.1|5.408e-5647.67predicted protein, partial [Thalassiosira pseudona... [more]
gi|219119727|ref|XP_002180617.1|2.170e-5547.15predicted protein, partial [Phaeodactylum tricornu... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2680rna2680Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications