rna2625, rna2625 (mRNA) Nannochloropsis gaditana

Overview
Namerna2625
Unique Namerna2625
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length2046
Alignment locationCM002459.1:825760..826657 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100044g13.1064.mrna
Orig protein idgnl|cribi|Naga_100044g13.1064
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:825760..826657 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100044g13gene2510Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2625rna2625-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28050.1cds2617Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2625 ID=rna2625|Name=rna2625|organism=Nannochloropsis gaditana|type=mRNA|length=2046bp
ATGGTCAGGACACGCAAATCAGACGCAGCACCCGGAACGCCTGCCATTGG
CAAGGATAAGCAAAATAAATCACGAGGAGACGACATGTACAAGCAGGTAG
AGGAGTATGTCATGAGGGTGAAAGATCTGGAAATCACGAACAAGCAGCTT
CGCGAGGAGTTGCGACGCTCAGGCGGAGATGACACGGTTGGAAAAGGAAT
TCGTTGCAGCACGCGTATGAGCAGCCCAAATTGTGTGAAAAAAATGCGAG
ATCTGCGCCAGCACATTCAGACACTGGAGAGTAAGATCAAAGAGGCTCGG
CGGGAGAATCAACAGCTTCGGGAGCAATTTAACGAGTCGTTCGAGGACGC
GCGTGAAAAGTTTCGAAGTCAAGGACGGATTCATGGAAATTTGATGGCCG
CCAAAAAGGCGGACGAGTTCTCCGGCCAAATATTGTACCTCAAAGACTCG
GTGCATCGCCTCGAGAAGACGGTGAAGGAATTAGAGGCTGAGCGCCGGCG
CTTGCAACAGGAGGTGAAAGAAGTGGACGAATTGCGAAACGATTTAAAAC
GCGCAGAGGAACGCCATGCAATGCTTGAGCGAAATGTGGAGAATCTTCAA
GACGAGAATGAGAATTTGGAGCGAGAATTGGAGCACCAAGAAGGGCGACA
CAGCCTGGGAGTGGTCGTGGAGGAAGAGAAACCGGGAGTGCCGGAGCTTG
AAGCCGAGATACGTACGCTCAAGGAGCAGGTAGAGGGGCTGACAGAGGAC
CTGAGGACCCGCATGTCCGCCGCAGAAGAGACGGAGTCTTTGAAGGATGA
GGTGGAGGAGTTGCGAGCAAGTTTGAAGGCGGCGACTTCGGCCGATCGAG
AGAGGCGAGAGGCACGGGATAGTATCGTGACCCAACTGGAAGTGTGTCGA
GAGCAGGCGCGGAAGGAAAAGGATCGCTGCCAAGAGCTGCAAAAAAGGGC
AGAGGCCTTGGTAGAGGCACAAAAAGCGGCGGAGGAGAAAGCGCGCCGAC
TGGAGGATAGCCCCAGCCGGACAATTGTCAAGGCTCGGGCCACAGCGTTG
GAATCGACGGTCAAAAGTTTAGAGGGGGAATTGAGTTTGTTGCGGCGAGA
AAGAAATAAGAATCTTGGGGATGTGGACGCTCTACAAGAGGACAAAGAGG
CGCTGGAGGATGAGGTTCGGAGATTAGCTCTTCAAATCGAACAGCAACGG
CGACAAGCCGAGGCGGTCCTGGCGCGAGAGACCGAGAGCTTGGAAAGGAA
AATTGATCGACTTCAAGAGGAATTGGACACGGCCAATGCGAAATCTGTCG
CAGCCGTTGAAGCGAGTGCTTCCGCAGTAGCTAGAGCATTGCAAGAGGTG
GGTCCTGCCAGTGCAGCCAGAAGGCAAGGCAGGGGGACAAGTCTTGGGGG
GACGGAGGAAGGCTCAGAGCAGCGCCTACTGGTGGAGGAAAACGCAAGAC
TACGGCGGGAGGTCGACGTGTATCGGGAGCTGGCGGGCAGTCAACACGAC
CAGATCTCGTTGGTGTATATTCAAGAGGTTAACGCACAGGCAGACTACCT
GGTGGTTGAGAATCGCACGAATCTGGACGTGAGTCTGGCAGGTTGGGCAT
TGGGAACCTCCTTGTCCGAGTCGGAGATCCAGTTCGAGTTTCCGGAAGAG
CTGATGCTTTCATCCCGTGCCTCCCTTAAAGTGTGGTGGGGCGCAAGAAA
CATAAGTTACAAGAGCCGACCCACACGTGGCAATCTCTTTTGGGAGGAGA
GTGACAGAATCGACATATTCCAGGCGCAAAACGATGAAGTGCTTTTGATG
GATGCGGAGGGTTGCGAGATGTCGCGTATGAGGATCGTGTCAGACAAGCG
GCGTGCACGGGCTGGTCCTTTCGTGGGAACTCCAACACCGGATTCCAAAC
GCTTTCGGTCATCGCCTTGGTCGGGTGGCGGCAGTGGGATGAGAGATAAT
TTTGGGGTGCGAACTAGTATTCTTGACGAAGACCAGGGAGAAAGCGACAT
GTTTATGATGGCGGTAGAGGGTTCCTTCAACGAGGAGGAGGGGTGA
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protein sequence of rna2625

>rna2625-protein ID=rna2625-protein|Name=rna2625|organism=Nannochloropsis gaditana|type=polypeptide|length=236bp
MLTSFGLLLLLLVKAIQCHKGEETSLANFSFLRNVENTPADLRRRFLRGT
GNFVPSTSNTNGGQIIGGVPWPSQSDRVPSPADRAKYAQQVNELLNANYF
VHENSFNSIQQKIYDRMALYAKLQARAEDPRVVASMQTGISSPVYQDLED
QVADPSFLTRLQAYLYRAAPRYTQTMARVQDPSYGTELQQKMYRGDFGPG
PDAPARLSAKATAVQTAPRPPVKRNKLNYPIRPHVP
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mRNA from alignment at CM002459.1:825760..826657-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2625 ID=rna2625|Name=rna2625|organism=Nannochloropsis gaditana|type=mRNA|length=898bp|location=Sequence derived from alignment at CM002459.1:825760..826657- (Nannochloropsis gaditana)
ATGCTCACCTCCTTTGGTTTGCTCCTCCTTCTACTTGTCAAAGCGATTCA
ATGCCACAAGGGGGAAGAAACATCTCTTGCAAACTTCTCTTTTTTGAGGA
ATGTTGAAAACACGCCCGCAGACTTACGACGTCGTTTTCTCCGAGGTACT
GGCAACTTCGTCCCTTCCACGAGCAACACCAACGGAGGACAAATCATCGG
AGGAGTGCCCTGGCCCTCACAATCCGATCGCGTTCCAAGCCCAGCCGATC
GAGCAAAATATGCGCAACAAGTGAACGAACTTTTAAATGCAAATTACTTT
GTGGTACGTCTTGGGAAGAAACGAAAAGTGTTCTGGTTTGGACACGCGCG
CTAAATTTTACTTCCCTGCTTTTCCAAACCAGCATGAAAACAGCTTCAAT
AGTATCCAACAAAAGATATATGATCGCATGGCTCTCTATGCCAAACTGCA
GGCACGTGCAGAAGATCCCAGAGTTGTGGCCAGCATGCAAACAGGCATCT
CTAGTCCGGTCTATCAGGACCTCGAAGACCAAGTTGCCGATCCGAGCTTT
CTAACCCGTCTCCAGGCCTACCTTTACCGGGCGGCACCTCGCTACACCCA
AACGATGGCCCGAGTCCAAGACCCTTCCTATGGAACTGAACTTCAGCAAA
AAATGTACCGCGGAGACTTTGGACCTGGCCCTGACGCGCCTGCACGATTG
AGTGCCAAGGCCACAGCTGTGCAAACTGCGCCACGCCCGCCAGTAAAACG
TAACAAATTAAATTACCCTATTCGTCCGCACGTTCCTTAAAAATCAACCT
TATGGAAACACGAGTTTCGATATTATTTGAATTAATTACTTATGCTGTGC
AACAATGATTTCGAGTGCTTTGGAACGAGCGCGCAGGGGGTTTTCGCT
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Coding sequence (CDS) from alignment at CM002459.1:825760..826657-

>rna2625 ID=rna2625|Name=rna2625|organism=Nannochloropsis gaditana|type=CDS|length=1422bp|location=Sequence derived from alignment at CM002459.1:825760..826657- (Nannochloropsis gaditana)
CATGAAAACAGCTTCAATAGTATCCAACAAAAGATATATGATCGCATGGC
TCTCTATGCCAAACTGCAGGCACGTGCAGAAGATCCCAGAGTTGTGGCCA
GCATGCAAACAGGCATCTCTAGTCCGGTCTATCAGGACCTCGAAGACCAA
GTTGCCGATCCGAGCTTTCTAACCCGTCTCCAGGCCTACCTTTACCGGGC
GGCACCTCGCTACACCCAAACGATGGCCCGAGTCCAAGACCCTTCCTATG
GAACTGAACTTCAGCAAAAAATGTACCGCGGAGACTTTGGACCTGGCCCT
GACGCGCCTGCACGATTGAGTGCCAAGGCCACAGCTGTGCAAACTGCGCC
ACGCCCGCCAGTAAAACGTAACAAATTAAATTACCCTATTCGTCCGCACG
TTCCTTAAATGCTCACCTCCTTTGGTTTGCTCCTCCTTCTACTTGTCAAA
GCGATTCAATGCCACAAGGGGGAAGAAACATCTCTTGCAAACTTCTCTTT
TTTGAGGAATGTTGAAAACACGCCCGCAGACTTACGACGTCGTTTTCTCC
GAGGTACTGGCAACTTCGTCCCTTCCACGAGCAACACCAACGGAGGACAA
ATCATCGGAGGAGTGCCCTGGCCCTCACAATCCGATCGCGTTCCAAGCCC
AGCCGATCGAGCAAAATATGCGCAACAAGTGAACGAACTTTTAAATGCAA
ATTACTTTGTGCATGAAAACAGCTTCAATAGTATCCAACAAAAGATATAT
GATCGCATGGCTCTCTATGCCAAACTGCAGGCACGTGCAGAAGATCCCAG
AGTTGTGGCCAGCATGCAAACAGGCATCTCTAGTCCGGTCTATCAGGACC
TCGAAGACCAAGTTGCCGATCCGAGCTTTCTAACCCGTCTCCAGGCCTAC
CTTTACCGGGCGGCACCTCGCTACACCCAAACGATGGCCCGAGTCCAAGA
CCCTTCCTATGGAACTGAACTTCAGCAAAAAATGTACCGCGGAGACTTTG
GACCTGGCCCTGACGCGCCTGCACGATTGAGTGCCAAGGCCACAGCTGTG
CAAACTGCGCCACGCCCGCCAGTAAAACGTAACAAATTAAATTACCCTAT
TCGTCCGCACGTTCCTTAAATGCTCACCTCCTTTGGTTTGCTCCTCCTTC
TACTTGTCAAAGCGATTCAATGCCACAAGGGGGAAGAAACATCTCTTGCA
AACTTCTCTTTTTTGAGGAATGTTGAAAACACGCCCGCAGACTTACGACG
TCGTTTTCTCCGAGGTACTGGCAACTTCGTCCCTTCCACGAGCAACACCA
ACGGAGGACAAATCATCGGAGGAGTGCCCTGGCCCTCACAATCCGATCGC
GTTCCAAGCCCAGCCGATCGAGCAAAATATGCGCAACAAGTGAACGAACT
TTTAAATGCAAATTACTTTGTG
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Synonyms
Publications