EWM28194.1, cds2520 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28194.1 vs. NCBI_GenBank
Match: gi|585110539|gb|EWM28194.1| (Derlin [Nannochloropsis gaditana]) HSP 1 Score: 705.286 bits (1819), Expect = 0.000e+0 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0 Query: 1 MMGYSFIYVKTDSAMRPQRRPARFGVSESHQKQPLIAHFLAGFAFRNLPTVGMFQQQDDEGQPEQPPGPPQQPNNLEQQQHHAPPPPPPAAEMGPWVWYMEMPVVSRMYLTASVLTTAACALDLISPFHLYFNLSLVREGQVWRLFTNFLYFGNLSLDFLFHMYFLVRYCRLLEEGTFRGRTADFLFMIFLGASMITCIAPFVRPSIPFLGSSLTFMMVYVWGRRNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIVVGHTYYFLEFVFPVVAEARGWPLRRLLHTPALLHYLCGTYHHEDAVQVDFAPAHQLADAAARLPAVAPGREPHPHQD 344 MMGYSFIYVKTDSAMRPQRRPARFGVSESHQKQPLIAHFLAGFAFRNLPTVGMFQQQDDEGQPEQPPGPPQQPNNLEQQQHHAPPPPPPAAEMGPWVWYMEMPVVSRMYLTASVLTTAACALDLISPFHLYFNLSLVREGQVWRLFTNFLYFGNLSLDFLFHMYFLVRYCRLLEEGTFRGRTADFLFMIFLGASMITCIAPFVRPSIPFLGSSLTFMMVYVWGRRNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIVVGHTYYFLEFVFPVVAEARGWPLRRLLHTPALLHYLCGTYHHEDAVQVDFAPAHQLADAAARLPAVAPGREPHPHQD Sbjct: 1 MMGYSFIYVKTDSAMRPQRRPARFGVSESHQKQPLIAHFLAGFAFRNLPTVGMFQQQDDEGQPEQPPGPPQQPNNLEQQQHHAPPPPPPAAEMGPWVWYMEMPVVSRMYLTASVLTTAACALDLISPFHLYFNLSLVREGQVWRLFTNFLYFGNLSLDFLFHMYFLVRYCRLLEEGTFRGRTADFLFMIFLGASMITCIAPFVRPSIPFLGSSLTFMMVYVWGRRNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIVVGHTYYFLEFVFPVVAEARGWPLRRLLHTPALLHYLCGTYHHEDAVQVDFAPAHQLADAAARLPAVAPGREPHPHQD 344
BLAST of EWM28194.1 vs. NCBI_GenBank
Match: gi|669171387|ref|XP_008621042.1| (hypothetical protein SDRG_16604 [Saprolegnia diclina VS20] >gi|530727279|gb|EQC25521.1| hypothetical protein SDRG_16604 [Saprolegnia diclina VS20]) HSP 1 Score: 310.842 bits (795), Expect = 1.224e-102 Identity = 151/212 (71.23%), Postives = 176/212 (83.02%), Query Frame = 0 Query: 95 PWVWYMEMPVVSRMYLTASVLTTAACALDLISPFHLYFNLSLV-REGQVWRLFTNFLYFGNLSLDFLFHMYFLVRYCRLLEEGTFRGRTADFLFMIFLGASMITCIAPFVRPSIPFLGSSLTFMMVYVWGRRNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIVVGHTYYFLEFVFPVVAEARGWPLRRLLHTPALLHYLCG 305 P WY E+PV+SR+YLT + LTTAACAL+LISPF LYFN +L+ GQVWRL TNFL+FG SLDFLFHMYFLVRY R+LEEG+FRGRTADFL+MI GA+ + +APFV S+ FLGSSLTFMMVY+WGRRNEH RL+FL LFPFTAPYLPWVLL FSMVLGN ATID+IGIVVGH YYF E V+P +A+ RGW +RR+L TPA + +LC Sbjct: 4 PLEWYYEIPVISRLYLTGAFLTTAACALELISPFSLYFNFNLIFYRGQVWRLLTNFLFFGLFSLDFLFHMYFLVRYSRMLEEGSFRGRTADFLYMILFGAAFMILVAPFV--SVHFLGSSLTFMMVYIWGRRNEHTRLSFLGLFPFTAPYLPWVLLLFSMVLGNSATIDLIGIVVGHIYYFFEDVYPTIADIRGWRVRRVLKTPAFVKFLCN 213
BLAST of EWM28194.1 vs. NCBI_GenBank
Match: gi|813126293|ref|XP_012196981.1| (hypothetical protein SPRG_03010 [Saprolegnia parasitica CBS 223.65] >gi|641538704|gb|KDO32535.1| hypothetical protein SPRG_03010 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 310.842 bits (795), Expect = 1.308e-102 Identity = 151/212 (71.23%), Postives = 176/212 (83.02%), Query Frame = 0 Query: 95 PWVWYMEMPVVSRMYLTASVLTTAACALDLISPFHLYFNLSLV-REGQVWRLFTNFLYFGNLSLDFLFHMYFLVRYCRLLEEGTFRGRTADFLFMIFLGASMITCIAPFVRPSIPFLGSSLTFMMVYVWGRRNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIVVGHTYYFLEFVFPVVAEARGWPLRRLLHTPALLHYLCG 305 P WY E+PV+SR+YLT + LTTAACAL+LISPF LYFN +L+ GQVWRL TNFL+FG SLDFLFHMYFLVRY R+LEEG+FRGRTADFL+MI GA+ + +APFV S+ FLGSSLTFMMVY+WGRRNEH RL+FL LFPFTAPYLPWVLL FSMVLGN ATID+IGIVVGH YYF E V+P +A+ RGW +RR+L TPA + +LC Sbjct: 4 PLEWYYEIPVISRLYLTGAFLTTAACALELISPFSLYFNFNLIFYRGQVWRLLTNFLFFGLFSLDFLFHMYFLVRYSRMLEEGSFRGRTADFLYMILFGAAFMILVAPFV--SVHFLGSSLTFMMVYIWGRRNEHTRLSFLGLFPFTAPYLPWVLLLFSMVLGNSATIDLIGIVVGHIYYFFEDVYPAIADIRGWRVRRVLKTPAFVKFLCN 213
BLAST of EWM28194.1 vs. NCBI_GenBank
Match: gi|698816176|ref|XP_009841117.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574103722|gb|ETV69260.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 308.531 bits (789), Expect = 1.003e-101 Identity = 159/254 (62.60%), Postives = 186/254 (73.23%), Query Frame = 0 Query: 95 PWVWYMEMPVVSRMYLTASVLTTAACALDLISPFHLYFNLSLV-REGQVWRLFTNFLYFGNLSLDFLFHMYFLVRYCRLLEEGTFRGRTADFLFMIFLGASMITCIAPFVRPSIPFLGSSLTFMMVYVWGRRNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIVVGHTYYFLEFVFPVVAEARGWPLRRLLHTPALLHYLCGTYHHEDAVQVDFAPAHQLADAAARLPA---VAPGREPHPHQD 344 P WY E+P++SR+YLT + LTT ACAL+LISPF LYFN +L+ GQVWRL TNFL+FG SLDF+FHMYFLVRY R+LEEG+FRGRTADFL+M+ LGA + +APFV S+ FLGSSLTFMMVYVWGRRNEH RL+FL LFPFTAPYLPWVLL FSMVLGN ATID+IGIVVGH YYF E V+P +A+ RGW +RR+L TP + +LC H AAA + VA E HPH D Sbjct: 4 PLEWYYEIPIISRLYLTGAFLTTVACALELISPFSLYFNFNLIFYRGQVWRLVTNFLFFGLFSLDFIFHMYFLVRYSRMLEEGSFRGRTADFLYMLLLGALTMILVAPFV--SVHFLGSSLTFMMVYVWGRRNEHTRLSFLGLFPFTAPYLPWVLLLFSMVLGNSATIDLIGIVVGHIYYFFEDVYPAIADIRGWRVRRILETPTFVKFLCN--------------PHAFTAAAAPIVNDIPVAEHAEFHPHAD 241
BLAST of EWM28194.1 vs. NCBI_GenBank
Match: gi|673041407|ref|XP_008874664.1| (hypothetical protein H310_10163 [Aphanomyces invadans] >gi|574469874|gb|ETV96887.1| hypothetical protein H310_10163 [Aphanomyces invadans]) HSP 1 Score: 307.76 bits (787), Expect = 2.180e-101 Identity = 156/251 (62.15%), Postives = 185/251 (73.71%), Query Frame = 0 Query: 95 PWVWYMEMPVVSRMYLTASVLTTAACALDLISPFHLYFNLSLV-REGQVWRLFTNFLYFGNLSLDFLFHMYFLVRYCRLLEEGTFRGRTADFLFMIFLGASMITCIAPFVRPSIPFLGSSLTFMMVYVWGRRNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIVVGHTYYFLEFVFPVVAEARGWPLRRLLHTPALLHYLCGTYHHEDAVQVDFAPAHQLADAAARLPAVAPGREPHPHQD 344 P WY E+PV+SR+YLT + LTT ACAL+LISPF LYFN +L+ GQVWRL TNFL+FG SLD++FHMYFLVRY R+LEEG+FRGRTADFL+M+ LGA + +APFV S+ FLGSSLTFMMVYVWGRRNEH RL+FL LFPFTAPYLPWVLL FSMVLGN ATID+IGIVVGH YYF E V+P +A+ RGW +RR+L TP + +LC + + A A +P E HPH D Sbjct: 4 PLEWYHEIPVISRLYLTGAFLTTVACALELISPFSLYFNFNLIFYRGQVWRLVTNFLFFGLFSLDYIFHMYFLVRYSRMLEEGSFRGRTADFLYMLLLGAVSMILVAPFV--SVHFLGSSLTFMMVYVWGRRNEHTRLSFLGLFPFTAPYLPWVLLLFSMVLGNSATIDLIGIVVGHVYYFFEDVYPAIADIRGWRVRRILETPTFVKFLCNPHAYTAAA----------APIVNDIPVADHPAEFHPHAD 242
BLAST of EWM28194.1 vs. NCBI_GenBank
Match: gi|224003931|ref|XP_002291637.1| (hypothetical protein THAPSDRAFT_6534 [Thalassiosira pseudonana CCMP1335] >gi|220973413|gb|EED91744.1| hypothetical protein THAPSDRAFT_6534 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 305.449 bits (781), Expect = 7.216e-101 Identity = 143/220 (65.00%), Postives = 178/220 (80.91%), Query Frame = 0 Query: 98 WYMEMPVVSRMYLTASVLTTAACALDLISPFHLYFNLSLVR-EGQVWRLFTNFLYFGNLSLDFLFHMYFLVRYCRLLEEGTFRGRTADFLFMIFLGASMITCIAPFVRPSIPFLGSSLTFMMVYVWGRRNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIVVGHTYYFLEFVFPVVAEARGWPLRRLLHTPALLHYLCGTYH-----HED 311 WYME+P++SR+Y T + LTTA CALD+ISPF LYFN L+ +GQ+WRL T +L+FG S+DFLFHMYFLVRYCR+LEEG FRG+TA+F+ MI G +T +APFV S+ FLGSSLTFMMVYVWGRRNE +R++FL +F F APYLPWV+LTFSM+LGNP TID IGI+VGHTYYFLE+V+PV+AE RGW +R++ P LLH++CGTY H+D Sbjct: 3 WYMEIPIISRLYFTGAFLTTAGCALDIISPFSLYFNFDLIFFQGQIWRLITTYLFFGMFSIDFLFHMYFLVRYCRMLEEGDFRGKTANFVMMIMFGVIFMTAVAPFV--SVHFLGSSLTFMMVYVWGRRNEDMRMSFLGVFTFNAPYLPWVMLTFSMLLGNPVTIDAIGILVGHTYYFLEYVYPVLAEIRGWRRKRIMEPPRLLHWICGTYQEPAHLHQD 220
BLAST of EWM28194.1 vs. NCBI_GenBank
Match: gi|695405528|ref|XP_009523839.1| (hypothetical protein PHYSODRAFT_490756 [Phytophthora sojae] >gi|348681306|gb|EGZ21122.1| hypothetical protein PHYSODRAFT_490756 [Phytophthora sojae]) HSP 1 Score: 303.138 bits (775), Expect = 1.126e-99 Identity = 152/253 (60.08%), Postives = 185/253 (73.12%), Query Frame = 0 Query: 93 MGPWVWYMEMPVVSRMYLTASVLTTAACALDLISPFHLYFNLSLVR-EGQVWRLFTNFLYFGNLSLDFLFHMYFLVRYCRLLEEGTFRGRTADFLFMIFLGASMITCIAPFVRPSIPFLGSSLTFMMVYVWGRRNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIVVGHTYYFLEFVFPVVAEARGWPLRRLLHTPALLHYLCGTYHHEDAVQVDFAPAHQLADAAARLPAVAPGREPHPHQD 344 + P WY E+PVVSR+YLT S LTT ACALDL+SPF LYFN +L+ +GQVWRL TNF++FG SLDFLFHMYF+VRYCRLLEEG+FRGRTADF++M+ LGA ++ +APFV +I FLGSSLTFMMVY+WGRRNEHVR++FL LFPFTAPYLPWVL +FS++LGN AT D+IGI+VGH YYFLE V+P +A RGW +R L TP ++ YL F P + D + HPH D Sbjct: 2 IDPLEWYYEIPVVSRLYLTGSFLTTTACALDLVSPFSLYFNFNLIFFKGQVWRLVTNFMFFGLFSLDFLFHMYFVVRYCRLLEEGSFRGRTADFVYMLLLGAVVMILVAPFV--NIHFLGSSLTFMMVYLWGRRNEHVRMSFLGLFPFTAPYLPWVLFSFSILLGNSATTDLIGIIVGHIYYFLEDVYPTIASIRGWKTQRPLATPRIIRYL-------------FDPRPVVVDGEQVINDFGAEGNDHPHMD 239
BLAST of EWM28194.1 vs. NCBI_GenBank
Match: gi|953495871|emb|CEG42767.1| (Predicted membrane protein [Plasmopara halstedii]) HSP 1 Score: 303.138 bits (775), Expect = 1.487e-99 Identity = 152/242 (62.81%), Postives = 184/242 (76.03%), Query Frame = 0 Query: 95 PWVWYMEMPVVSRMYLTASVLTTAACALDLISPFHLYFNLSLVR-EGQVWRLFTNFLYFGNLSLDFLFHMYFLVRYCRLLEEGTFRGRTADFLFMIFLGASMITCIAPFVRPSIPFLGSSLTFMMVYVWGRRNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIVVGHTYYFLEFVFPVVAEARGWPLRRLLHTPALLHYLCG---TYHHEDAVQVDFAPAHQLADAAARLPA 332 P WY E+P+VSR+YLT S LTT ACALDL+SPF LYFN +L+ +GQVWRL TNFL+FG SLDFLFHMYF+VRYCRLLEEG+FRGRTADF++M+ LGA+ + +APFV +I FLGSSLTFMMVY+WGRRNEHVR++FL LFPFTAPYLPWVL +FS++LGN AT D+IGI+VGH YYFLE V+P +A RGW RR L TP + YL + + + DF A A RL + Sbjct: 4 PLEWYYEIPIVSRLYLTGSFLTTTACALDLVSPFSLYFNFNLIFFKGQVWRLVTNFLFFGLFSLDFLFHMYFVVRYCRLLEEGSFRGRTADFIYMLLLGAAFMILVAPFV--NIHFLGSSLTFMMVYLWGRRNEHVRMSFLGLFPFTAPYLPWVLFSFSILLGNSATTDLIGIIVGHIYYFLEDVYPTIASIRGWKTRRPLATPRFIRYLIDPRPVAVNNEPILNDFGGAEHHLHADVRLQS 243
BLAST of EWM28194.1 vs. NCBI_GenBank
Match: gi|397575888|gb|EJK49946.1| (hypothetical protein THAOC_31124 [Thalassiosira oceanica]) HSP 1 Score: 300.442 bits (768), Expect = 1.089e-98 Identity = 142/216 (65.74%), Postives = 173/216 (80.09%), Query Frame = 0 Query: 98 WYMEMPVVSRMYLTASVLTTAACALDLISPFHLYFNLSLVR-EGQVWRLFTNFLYFGNLSLDFLFHMYFLVRYCRLLEEGTFRGRTADFLFMIFLGASMITCIAPFVRPSIPFLGSSLTFMMVYVWGRRNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIVVGHTYYFLEFVFPVVAEARGWPLRRLLHTPALLHYLCGTYH-HED 311 WYM +PVVSR+Y T + LTTA CALD+ISPF LYFN L+ +GQ+WRL T +L+FG S+DF+FHMYFLVRYCR+LEEG FRGRTA F+ MI G +T +APFV S+ FLGSSLTFMM YVWGRRNE +R+ FL +F F APYLPWV+LTFS++LGN TID IGI+VGHTYYFLE+V+P VAE RGW +R+L P +LH++CGTYH H+D Sbjct: 19 WYMGIPVVSRLYFTGAFLTTAGCALDIISPFSLYFNWDLIFFQGQIWRLLTTYLFFGMFSIDFMFHMYFLVRYCRMLEEGDFRGRTAHFVMMIMFGVIFMTAVAPFV--SVHFLGSSLTFMMTYVWGRRNEDMRMAFLGIFTFNAPYLPWVMLTFSLLLGNSITIDAIGILVGHTYYFLEYVYPKVAEIRGWKRKRILEPPRILHWICGTYHEHQD 232
BLAST of EWM28194.1 vs. NCBI_GenBank
Match: gi|301121464|ref|XP_002908459.1| (Der1-like family, putative [Phytophthora infestans T30-4] >gi|262103490|gb|EEY61542.1| Der1-like family, putative [Phytophthora infestans T30-4]) HSP 1 Score: 299.286 bits (765), Expect = 3.989e-98 Identity = 145/210 (69.05%), Postives = 174/210 (82.86%), Query Frame = 0 Query: 95 PWVWYMEMPVVSRMYLTASVLTTAACALDLISPFHLYFNLSLVR-EGQVWRLFTNFLYFGNLSLDFLFHMYFLVRYCRLLEEGTFRGRTADFLFMIFLGASMITCIAPFVRPSIPFLGSSLTFMMVYVWGRRNEHVRLTFLNLFPFTAPYLPWVLLTFSMVLGNPATIDVIGIVVGHTYYFLEFVFPVVAEARGWPLRRLLHTPALLHYL 303 P WY E+PVVSR+YLT S LTT ACALDL+SPF LYFN +L+ +GQVWRL TNF++FG SLDFLFHMYF+VRYCRLLEEG+FRGRTADF++M+ LGA + +APFV +I FLGSSLTFMMVY+WGRRNEHVR++FL LFPFTAPYLPWVL +FS++LGN AT D+IGI+VGH YYFLE V+P +A RGW +R L TP ++ YL Sbjct: 4 PLEWYYEIPVVSRLYLTGSFLTTTACALDLVSPFSLYFNFNLIFFKGQVWRLLTNFMFFGLFSLDFLFHMYFVVRYCRLLEEGSFRGRTADFVYMLLLGAVFMILVAPFV--NIHFLGSSLTFMMVYLWGRRNEHVRMSFLGLFPFTAPYLPWVLFSFSILLGNSATTDLIGIIVGHIYYFLEDVYPTIASIRGWKTQRPLATPRIIRYL 211 The following BLAST results are available for this feature:
BLAST of EWM28194.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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