EWM28160.1, cds2446 (CDS) Nannochloropsis gaditana

Overview
NameEWM28160.1
Unique Namecds2446
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:418100..418786 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28160.1
Productdephospho- kinase
Orig transcript idgnl|cribi|Naga_100004g90.9091.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:418100..418786 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0015937coenzyme A biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004140dephospho-CoA kinase activity
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001977Depp_CoAkinase
Homology
BLAST of EWM28160.1 vs. NCBI_GenBank
Match: gi|585110505|gb|EWM28160.1| (dephospho- kinase [Nannochloropsis gaditana])

HSP 1 Score: 466.077 bits (1198), Expect = 3.628e-166
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0
Query:    1 MPSPPIRTQVDAGMKSVLVHGLTGGIASGKTHACSVLRGLGATVLNADLLAHACYAPHTPANQQLRKAFGPSIFTTDGRVDRKKLGKLVFQRDHRSLQQLNKIMFPATEARAKEEIARLTTEGHAWVVVEAAVLVEAGWDLWMDEVWTMLIDPKLAQARLMDRDGMTAEEAQRRIAALASNEVRNKAATLLIDSSGSKEQTAAKLRVAAKDLKRRVKDVHNLDLPLTI 228
            MPSPPIRTQVDAGMKSVLVHGLTGGIASGKTHACSVLRGLGATVLNADLLAHACYAPHTPANQQLRKAFGPSIFTTDGRVDRKKLGKLVFQRDHRSLQQLNKIMFPATEARAKEEIARLTTEGHAWVVVEAAVLVEAGWDLWMDEVWTMLIDPKLAQARLMDRDGMTAEEAQRRIAALASNEVRNKAATLLIDSSGSKEQTAAKLRVAAKDLKRRVKDVHNLDLPLTI
Sbjct:    1 MPSPPIRTQVDAGMKSVLVHGLTGGIASGKTHACSVLRGLGATVLNADLLAHACYAPHTPANQQLRKAFGPSIFTTDGRVDRKKLGKLVFQRDHRSLQQLNKIMFPATEARAKEEIARLTTEGHAWVVVEAAVLVEAGWDLWMDEVWTMLIDPKLAQARLMDRDGMTAEEAQRRIAALASNEVRNKAATLLIDSSGSKEQTAAKLRVAAKDLKRRVKDVHNLDLPLTI 228          
BLAST of EWM28160.1 vs. NCBI_GenBank
Match: gi|931464594|gb|KPK46991.1| (hypothetical protein AMJ77_04575 [Dehalococcoidia bacterium SM23_28_2])

HSP 1 Score: 149.443 bits (376), Expect = 1.542e-41
Identity = 81/200 (40.50%), Postives = 123/200 (61.50%), Query Frame = 0
Query:   17 VLVHGLTGGIASGKTHACSVLRGLGATVLNADLLAHACYAPHTPANQQLRKAFGPSIFTTDGRVDRKKLGKLVFQRDHRSLQQLNKIMFPATEARAKEEIARLTTEGHAWVVVEAAVLVEAGWDLWMDEVWTMLIDPKLAQARLMDRDGMTAEEAQRRIAALASNEVRNKAATLLIDSSGSKEQTAAKLRVAAKDLKRRV 216
            + V GLTGGI SGK+    +LR  GA ++ AD + H  Y P TP  QQ+  AFG  +   DG++DR+KLG++VF  D ++ ++L+ I  P  +    E +  L  +G    V+EAA+L+EAGWD   DEVW  ++ P++A  R M+R G++ E+A+ RIAA  SNE R K A ++ID++ + E+ A ++     DL  R+
Sbjct:    1 MFVIGLTGGIGSGKSTVSEMLRAKGAAMVYADQIGHEAYRPGTPVWQQVVDAFGRQVVGGDGQIDRRKLGQVVFS-DPQACRRLDAITHPPMKRMMAERLEELRRQGTRVAVLEAAILIEAGWDELADEVWMTVVSPEVAAQRSMERSGLSREQAEARIAAQLSNEERLKHAQVVIDTNCTLEEVAQRVDELWDDLIGRL 199          
BLAST of EWM28160.1 vs. NCBI_GenBank
Match: gi|931361098|gb|KPJ53054.1| (hypothetical protein AMJ37_01915 [Dehalococcoidia bacterium DG_18])

HSP 1 Score: 147.902 bits (372), Expect = 5.804e-41
Identity = 83/199 (41.71%), Postives = 121/199 (60.80%), Query Frame = 0
Query:   17 VLVHGLTGGIASGKTHACSVLRGLGATVLNADLLAHACYAPHTPANQQLRKAFGPSIFTTDGRVDRKKLGKLVFQRDHRSLQQLNKIMFPATEARAKEEIARLTTEGHAWVVVEAAVLVEAGWDLWMDEVWTMLIDPKLAQARLMDRDGMTAEEAQRRIAALASNEVRNKAATLLIDSSGSKEQTAAKLRVAAKDLKRR 215
            ++V GLTGGI SGK+    +L   GA +++AD + H  Y PHT   Q+L  AFG SI   +  +DRKKLG++VF  D R+L +LN+I+ P      KEEI RL  EG   VV+EAAVL+EA W   +DEVW  +   ++A  RL +R G++ E+A+ RI +  S+E R + A ++ID+     Q  A++    + L +R
Sbjct:    1 MIVIGLTGGILSGKSTISQMLAEKGAVIIDADKIGHEAYKPHTKTWQELVDAFGKSILKQNMEIDRKKLGEIVFN-DPRALARLNEIVHPKMHTMMKEEINRLRGEGVGMVVLEAAVLIEANWTDLVDEVWVAVAPEEVAVKRLQNRGGLSEEQARARIRSQLSHEERARHADVIIDTDCEISQVRARVAELWQKLHKR 198          
BLAST of EWM28160.1 vs. NCBI_GenBank
Match: gi|931436728|gb|KPK22001.1| (hypothetical protein AMJ76_01215 [Dehalococcoidia bacterium SM23_28_1])

HSP 1 Score: 147.902 bits (372), Expect = 6.289e-41
Identity = 81/200 (40.50%), Postives = 119/200 (59.50%), Query Frame = 0
Query:   17 VLVHGLTGGIASGKTHACSVLRGLGATVLNADLLAHACYAPHTPANQQLRKAFGPSIFTTDGRVDRKKLGKLVFQRDHRSLQQLNKIMFPATEARAKEEIARLTTEGHAWVVVEAAVLVEAGWDLWMDEVWTMLIDPKLAQARLMDRDGMTAEEAQRRIAALASNEVRNKAATLLIDSSGSKEQTAAKLRVAAKDLKRRV 216
            + V GLTGGI SGK+    +LR  GA ++ AD + H  Y P  P  +Q+  AFG  +   DG++DR+KLG++VF  D  + Q+L+ I  P  E    E +  L  +G    V+EAA+L+EAGW    DEVW  ++ PK+A  R M+R G++ E+A+ RIAA  SNE R K A ++ID++ S  + A ++     DL  R+
Sbjct:    1 MFVIGLTGGIGSGKSTVSEMLRAKGAAIVYADQIGHEVYRPGAPVWEQVVAAFGRQVVADDGQIDRRKLGQVVFS-DPEARQRLDAITHPPMEQMMAERLEELRQQGTRVAVLEAAILIEAGWAHLADEVWVTVVSPKVAAERSMERSGLSREQAEARIAAQLSNEERLKHAQVVIDTNCSLAEVAQRVDELWDDLIARL 199          
BLAST of EWM28160.1 vs. NCBI_GenBank
Match: gi|766925404|ref|XP_011494595.1| (PREDICTED: bifunctional coenzyme A synthase-like [Ceratosolen solmsi marchali])

HSP 1 Score: 152.14 bits (383), Expect = 1.461e-39
Identity = 77/194 (39.69%), Postives = 119/194 (61.34%), Query Frame = 0
Query:   21 GLTGGIASGKTHACSVLRGLGATVLNADLLAHACYAPHTPANQQLRKAFGPSIFTTDGRVDRKKLGKLVFQRDHRSLQQLNKIMFPATEARAKEEIARLTTEGHAWVVVEAAVLVEAGWDLWMDEVWTMLIDPKLAQARLMDRDGMTAEEAQRRIAALASNEVRNKAATLLIDSSGSKEQTAAKLRVAAKDLKR 214
            GLTGGIASGK+     +  LGA ++N DL+AH+ YAP       + + FGP   T+DG +DR+ LG LVF  D   L++LNK+M+P     AK +I +L  EG   V++EAAVL++AGW     E+WT +I  + A  RLM+R+ ++ EEA++RI    SN  +   A +++ +  S E +  +++ A  ++K+
Sbjct:  324 GLTGGIASGKSSIAEKIEKLGAGLINCDLIAHSLYAPGMKCFNLIVETFGPEYLTSDGEIDRRALGSLVF-NDKNELEKLNKLMWPVILEEAKNQIDKLYKEGFDIVIIEAAVLIQAGWQHICHEIWTCIIPQEEAIKRLMERNKLSTEEAKKRILVQPSNIEQIHNAHVVVSTLWSHEISQQQIQKAWNEIKK 516          
BLAST of EWM28160.1 vs. NCBI_GenBank
Match: gi|675871244|ref|XP_009021182.1| (hypothetical protein HELRODRAFT_82715 [Helobdella robusta] >gi|555697312|gb|ESO00545.1| hypothetical protein HELRODRAFT_82715 [Helobdella robusta])

HSP 1 Score: 151.369 bits (381), Expect = 2.022e-39
Identity = 76/174 (43.68%), Postives = 113/174 (64.94%), Query Frame = 0
Query:   11 DAGMKSVLVHGLTGGIASGKTHACSVLRGLGATVLNADLLAHACYAPHTPANQQLRKAFGPSIFTTDGRVDRKKLGKLVFQRDHRSLQQLNKIMFPATEARAKEEIARLTTEGHAWVVVEAAVLVEAGWDLWMDEVWTMLIDPKLAQARLMDRDGMTAEEAQRRIAALASNEVR 184
            D+  KS  + GLTGGIASGKT     L GLGA ++N DLL H  Y P +   +++R+ FG  +    G VDRKKLG +VF  D   L +LN+I++PA +   ++ + +LT+EG + +V++AAVL+EAGWD  + EVWT +I    A+ R+M+R+ ++  EA+ RI +  SN+ R
Sbjct:  310 DSLPKSPFIIGLTGGIASGKTSVSKRLEGLGAGIINCDLLGHEAYLPGSETLEKIRQNFGSEVIDATGHVDRKKLGGIVFS-DKNKLNELNQIVWPAIQKLVEKYVQKLTSEGKSIIVLDAAVLLEAGWDGGVHEVWTAIIPAHEAEKRIMERNKVSQGEARERIKSQISNQER 482          
BLAST of EWM28160.1 vs. NCBI_GenBank
Match: gi|1005435072|ref|XP_015755043.1| (PREDICTED: bifunctional coenzyme A synthase-like [Acropora digitifera])

HSP 1 Score: 150.984 bits (380), Expect = 4.090e-39
Identity = 84/212 (39.62%), Postives = 125/212 (58.96%), Query Frame = 0
Query:    5 PIRTQVDAGMKSVLVHGLTGGIASGKTHACSVLRGLGATVLNADLLAHACYAPHTPANQQLRKAFGPSIFTTDGRVDRKKLGKLVFQRDHRSLQQLNKIMFPATEARAKEEIARLTTEGHAWVVVEAAVLVEAGWDLWMDEVWTMLIDPKLAQARLMDRDGMTAEEAQRRIAALASNEVRNKAATLLIDSSGSKEQTAAKLRVAAKDLKRRV 216
            P+R   D G +   + GLTGGIASGK+  C  L+GLGA V+N D L H  Y P   A Q++ K FG  + T +G ++R+ LG +VF  D + L  LN+I++P     AK EIA+   +G    +++AAVL+EAGWD   +EVW   +    A +R++ RDG++ E+A++RI +  SNE R   A + I +    E T  ++  A K L+ R+
Sbjct:  331 PVRK--DKGKQQPYIIGLTGGIASGKSSVCQRLKGLGAAVINCDQLGHQAYTPGQKAYQEIIKNFGKEVVTENGMINRRTLGAIVFA-DKKMLTLLNQIVWPEILLLAKAEIAKYGEDGFNVCILDAAVLLEAGWDDVANEVWVTFVPEDEALSRILSRDGLSEEQAKKRIKSQISNEERLAQANVAICTLWEPEYTQEQVVKAWKLLQARL 539          
BLAST of EWM28160.1 vs. NCBI_GenBank
Match: gi|524864221|ref|XP_005088948.1| (PREDICTED: bifunctional coenzyme A synthase-like isoform X1 [Aplysia californica] >gi|524864223|ref|XP_005088949.1| PREDICTED: bifunctional coenzyme A synthase-like isoform X1 [Aplysia californica])

HSP 1 Score: 150.599 bits (379), Expect = 6.510e-39
Identity = 85/196 (43.37%), Postives = 121/196 (61.73%), Query Frame = 0
Query:   21 GLTGGIASGKTHACSVLRGLGATVLNADLLAHACYAPHTPANQQLRKAFGPSIFTTDGRVDRKKLGKLVFQRDHRSLQQLNKIMFPATEARAKEEIARLTTEGHAWVVVEAAVLVEAGWDLWMDEVWTMLIDPKLAQARLMDRDGMTAEEAQRRIAALASNEVRNKAATLLIDSSGSKEQTAAKLRVAAKDLKRRV 216
             +TGGIASGK++ CS L  LGA V+N DLL H  Y   T A Q + K FG  +   DG+++RK+LG +VF  D  +L +LN I++PA    A+E IA+    G   VV+EAAVL EAGWD  + EVWT  I    A  R+ DR+ ++ EEA++RI +  SNEVR   + ++I    +KE T  +++ A   L++R+
Sbjct:  338 AVTGGIASGKSNVCSELEKLGAKVINCDLLGHKAYDEGTAAYQAIVKEFGQKVVDEDGKINRKQLGAIVFA-DRANLDKLNSIVWPAIRQLAEEAIAQHKAAGVPIVVLEAAVLFEAGWDDMVHEVWTAFIPRPEAVNRIKDRNQLSQEEAEQRIDSQISNEVRIAQSNVVICPLWAKEITRKQIQKAWSLLQKRI 532          
BLAST of EWM28160.1 vs. NCBI_GenBank
Match: gi|985394128|ref|XP_015364450.1| (PREDICTED: bifunctional coenzyme A synthase-like [Diuraphis noxia])

HSP 1 Score: 149.828 bits (377), Expect = 9.895e-39
Identity = 85/205 (41.46%), Postives = 116/205 (56.59%), Query Frame = 0
Query:   16 SVLVHGLTGGIASGKTHACSVLRGLGATVLNADLLAHACYAPHTPANQQLRKAFGPSIFTTDGRVDRKKLGKLVFQRDHRSLQQLNKIMFPATEARAKEEIARLTTEGHAWVVVEAAVLVEAGWDLWMDEVWTMLIDPKLAQARLMDRDGMTAEEAQRRIAALASNEVRNKAATLLIDSSGSKEQTAAKLRVAAKDLKRRVKDVH 220
            S  + GLTGGIASGK+   + L+ LGA V+NAD LAH  Y  + PA Q +   FGPSI TT+  VDRKKLG +VF    + L+QLN I++P    R K  I   +T+GH  VV+EAAVL+ A W     E+W  +I P  A  RL +R+ +  ++A  RI +  SN    K A +L  +  S   T  +++ A   L  R+   H
Sbjct:  314 SPYIIGLTGGIASGKSSIANYLKDLGAFVINADTLAHRLYDINQPAYQDVIDVFGPSILTTNNEVDRKKLGAIVFNNKDK-LEQLNTIIWPLILQRVKSIIQ--STKGHNIVVLEAAVLLSANWQYHCHEIWVSIIPPNEATKRLQERNNLNEKQALDRINSQPSNYEYVKNANVLFSTLWSCNFTRIQIKRAWNSLMSRISSTH 515          
BLAST of EWM28160.1 vs. NCBI_GenBank
Match: gi|970901850|ref|XP_015116701.1| (PREDICTED: bifunctional coenzyme A synthase [Diachasma alloeum] >gi|970901852|ref|XP_015116702.1| PREDICTED: bifunctional coenzyme A synthase [Diachasma alloeum] >gi|970901854|ref|XP_015116703.1| PREDICTED: bifunctional coenzyme A synthase [Diachasma alloeum])

HSP 1 Score: 147.132 bits (370), Expect = 8.770e-38
Identity = 82/190 (43.16%), Postives = 118/190 (62.11%), Query Frame = 0
Query:   21 GLTGGIASGKTHACSVLRGLGATVLNADLLAHACYAPHTPANQQLRKAFGPSIFTTDGRVDRKKLGKLVFQRDHRSLQQLNKIMFPATEARAKEEIARLTTEGHAWVVVEAAVLVEAGWDLWMDEVWTMLIDPKLAQARLMDRDGMTAEEAQRRIAALASNEVRNKAATLLIDSSGSKEQTAAKLRVAAK 210
            GLTGGIASGK+     L+ LGA V++ D LAH  Y P     Q++ + FG  I   +GR+DRKKLGK+VF  D   L +LNK ++PA    A  E+ RL TEG+  +V+EAAVL++A W     E+WT +I  K A  R+M+R+G+T +EA+ RI    SN  + +AAT+++ +  S + T  ++  A K
Sbjct:  323 GLTGGIASGKSSVAEKLQSLGAGVVHCDKLAHDLYEPGRTGFQRVVEVFGEDILDAEGRIDRKKLGKIVFN-DKEQLDRLNKAVWPAILDAALAEVERLHTEGYEIIVMEAAVLIQAKWQSVCHEIWTCIIPHKEAVKRMMERNGLTEQEAEARINVQPSNTEQVEAATVVLSTLWSHQVTLEQVNRAWK 511          
The following BLAST results are available for this feature:
BLAST of EWM28160.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110505|gb|EWM28160.1|3.628e-166100.00dephospho- kinase [Nannochloropsis gaditana][more]
gi|931464594|gb|KPK46991.1|1.542e-4140.50hypothetical protein AMJ77_04575 [Dehalococcoidia ... [more]
gi|931361098|gb|KPJ53054.1|5.804e-4141.71hypothetical protein AMJ37_01915 [Dehalococcoidia ... [more]
gi|931436728|gb|KPK22001.1|6.289e-4140.50hypothetical protein AMJ76_01215 [Dehalococcoidia ... [more]
gi|766925404|ref|XP_011494595.1|1.461e-3939.69PREDICTED: bifunctional coenzyme A synthase-like [... [more]
gi|675871244|ref|XP_009021182.1|2.022e-3943.68hypothetical protein HELRODRAFT_82715 [Helobdella ... [more]
gi|1005435072|ref|XP_015755043.1|4.090e-3939.62PREDICTED: bifunctional coenzyme A synthase-like [... [more]
gi|524864221|ref|XP_005088948.1|6.510e-3943.37PREDICTED: bifunctional coenzyme A synthase-like i... [more]
gi|985394128|ref|XP_015364450.1|9.895e-3941.46PREDICTED: bifunctional coenzyme A synthase-like [... [more]
gi|970901850|ref|XP_015116701.1|8.770e-3843.16PREDICTED: bifunctional coenzyme A synthase [Diach... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2454rna2454Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications