EWM28236.1, cds2443 (CDS) Nannochloropsis gaditana

Overview
NameEWM28236.1
Unique Namecds2443
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:412903..415653 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28236.1
Product30s ribosomal protein s5
Orig transcript idgnl|cribi|Naga_100004g87.9167.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:412903..415653 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005198structural molecule activity
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR020568Ribosomal_S5_D2-typ_fold
IPR000851Ribosomal_S5
IPR014720dsRNA-bd_dom
IPR005324Ribosomal_S5_C
IPR013810Ribosomal_S5_N
IPR012677Nucleotide-bd_a/b_plait
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR000504RRM_dom
Homology
BLAST of EWM28236.1 vs. NCBI_GenBank
Match: gi|585110581|gb|EWM28236.1| (30s ribosomal protein s5 [Nannochloropsis gaditana])

HSP 1 Score: 1865.89 bits (4832), Expect = 0.000e+0
Identity = 916/916 (100.00%), Postives = 916/916 (100.00%), Query Frame = 0
Query:    1 MMAVGRARSSSSLVGIARYSTWLHHHQALQGQTWNMYTKSATRASRRTPQQRWLSSHPKAASLGYTLRVEGHFDEAKAQALRPKDVVTLFGAFEPYNIVMRPPGAVGGGAKYQAKKGNSLPPPPLVLATFQVPSLKYAREIAHSFHHDESWGDRITVHQEQETFPVFISGLPEGVSGSELKKQIDRAGASDPKQRRVMGGSEPASESKGQSKSLLTETAIDAYDTYAVFRCPDKYSSMGLLQGSFQLAPVGPKARGNTGEKRLGAGAENGAGATEAEAQAEGNAGERMVEVEEAGQEGRGEGDGEDARGVLSYAAWKTYPVRVNGLPGDANEGEVMAVFSKYMPYDVEVLPVEASEAADGNEGGTRGAYLRFARRIQGVECASEMQDVSVRNNVLQVRRAWEKVYPLLIEAASGEGKVTADELEQVLAPLKRMKDSSLLDAELLEEGAAAVIRFGSQTGAEEGLGVLEAGAGSGRRKVRPAWKDFRVDVRNLPLEVTQEELREMVHLTTPSKVAVSLPVGGRYRTGSLSFTTREEADLAFSQLSGTGLPDLKLRKAWAVYRLRVKGLPADTREEDLREVLRGGYEPFQVDFPRSRKGNPKGEAVLRFRTYDQLVAAIGRLYGRDSPMDEVENQARWASAGEGMSFDDPAGSLEEELARLPPSASSPLSTETGMGLDALFDRHWKEERGPGEEGGGEAGMEGGEAAASKPGGLGVAEPGAKGSGKDVQEEEEEKEEESYAGRDVNPFAIHPEGKWVKMLVDTDTTQKIIKGGHILSYRALVLVGNLKGCGGWGVGKGATLEEAQIRAYRAAKKNLIHIDLYRNRCITTDLYGKHNNCRIYIQAGQPNRPHKEGRMINDMLRIMGVECGEARSIGRRNPYSVVRALFHAISKHEGVEALSRKRGRRLISVSKARYLGL 916
            MMAVGRARSSSSLVGIARYSTWLHHHQALQGQTWNMYTKSATRASRRTPQQRWLSSHPKAASLGYTLRVEGHFDEAKAQALRPKDVVTLFGAFEPYNIVMRPPGAVGGGAKYQAKKGNSLPPPPLVLATFQVPSLKYAREIAHSFHHDESWGDRITVHQEQETFPVFISGLPEGVSGSELKKQIDRAGASDPKQRRVMGGSEPASESKGQSKSLLTETAIDAYDTYAVFRCPDKYSSMGLLQGSFQLAPVGPKARGNTGEKRLGAGAENGAGATEAEAQAEGNAGERMVEVEEAGQEGRGEGDGEDARGVLSYAAWKTYPVRVNGLPGDANEGEVMAVFSKYMPYDVEVLPVEASEAADGNEGGTRGAYLRFARRIQGVECASEMQDVSVRNNVLQVRRAWEKVYPLLIEAASGEGKVTADELEQVLAPLKRMKDSSLLDAELLEEGAAAVIRFGSQTGAEEGLGVLEAGAGSGRRKVRPAWKDFRVDVRNLPLEVTQEELREMVHLTTPSKVAVSLPVGGRYRTGSLSFTTREEADLAFSQLSGTGLPDLKLRKAWAVYRLRVKGLPADTREEDLREVLRGGYEPFQVDFPRSRKGNPKGEAVLRFRTYDQLVAAIGRLYGRDSPMDEVENQARWASAGEGMSFDDPAGSLEEELARLPPSASSPLSTETGMGLDALFDRHWKEERGPGEEGGGEAGMEGGEAAASKPGGLGVAEPGAKGSGKDVQEEEEEKEEESYAGRDVNPFAIHPEGKWVKMLVDTDTTQKIIKGGHILSYRALVLVGNLKGCGGWGVGKGATLEEAQIRAYRAAKKNLIHIDLYRNRCITTDLYGKHNNCRIYIQAGQPNRPHKEGRMINDMLRIMGVECGEARSIGRRNPYSVVRALFHAISKHEGVEALSRKRGRRLISVSKARYLGL
Sbjct:    1 MMAVGRARSSSSLVGIARYSTWLHHHQALQGQTWNMYTKSATRASRRTPQQRWLSSHPKAASLGYTLRVEGHFDEAKAQALRPKDVVTLFGAFEPYNIVMRPPGAVGGGAKYQAKKGNSLPPPPLVLATFQVPSLKYAREIAHSFHHDESWGDRITVHQEQETFPVFISGLPEGVSGSELKKQIDRAGASDPKQRRVMGGSEPASESKGQSKSLLTETAIDAYDTYAVFRCPDKYSSMGLLQGSFQLAPVGPKARGNTGEKRLGAGAENGAGATEAEAQAEGNAGERMVEVEEAGQEGRGEGDGEDARGVLSYAAWKTYPVRVNGLPGDANEGEVMAVFSKYMPYDVEVLPVEASEAADGNEGGTRGAYLRFARRIQGVECASEMQDVSVRNNVLQVRRAWEKVYPLLIEAASGEGKVTADELEQVLAPLKRMKDSSLLDAELLEEGAAAVIRFGSQTGAEEGLGVLEAGAGSGRRKVRPAWKDFRVDVRNLPLEVTQEELREMVHLTTPSKVAVSLPVGGRYRTGSLSFTTREEADLAFSQLSGTGLPDLKLRKAWAVYRLRVKGLPADTREEDLREVLRGGYEPFQVDFPRSRKGNPKGEAVLRFRTYDQLVAAIGRLYGRDSPMDEVENQARWASAGEGMSFDDPAGSLEEELARLPPSASSPLSTETGMGLDALFDRHWKEERGPGEEGGGEAGMEGGEAAASKPGGLGVAEPGAKGSGKDVQEEEEEKEEESYAGRDVNPFAIHPEGKWVKMLVDTDTTQKIIKGGHILSYRALVLVGNLKGCGGWGVGKGATLEEAQIRAYRAAKKNLIHIDLYRNRCITTDLYGKHNNCRIYIQAGQPNRPHKEGRMINDMLRIMGVECGEARSIGRRNPYSVVRALFHAISKHEGVEALSRKRGRRLISVSKARYLGL 916          
BLAST of EWM28236.1 vs. NCBI_GenBank
Match: gi|553181524|ref|XP_005853580.1| (serine threonine protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295477|gb|EKU22776.1| serine threonine protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 712.99 bits (1839), Expect = 0.000e+0
Identity = 355/356 (99.72%), Postives = 356/356 (100.00%), Query Frame = 0
Query:  303 DGEDARGVLSYAAWKTYPVRVNGLPGDANEGEVMAVFSKYMPYDVEVLPVEASEAADGNEGGTRGAYLRFARRIQGVECASEMQDVSVRNNVLQVRRAWEKVYPLLIEAASGEGKVTADELEQVLAPLKRMKDSSLLDAELLEEGAAAVIRFGSQTGAEEGLGVLEAGAGSGRRKVRPAWKDFRVDVRNLPLEVTQEELREMVHLTTPSKVAVSLPVGGRYRTGSLSFTTREEADLAFSQLSGTGLPDLKLRKAWAVYRLRVKGLPADTREEDLREVLRGGYEPFQVDFPRSRKGNPKGEAVLRFRTYDQLVAAIGRLYGRDSPMDEVENQARWASAGEGMSFDDPAGSLEEELAR 658
            DGEDARGVLSYAAWKTYPVRVNGLPGDANEGEVMAVFSKYMPYDVEVLPVEASEAADGNEGGTRGAYLRFARRIQGVECASEMQDVSVRNNVLQVRRAWEKVYPLLIEAASGEGKVTADELEQVLAPLKRMKDSSLLDAELL+EGAAAVIRFGSQTGAEEGLGVLEAGAGSGRRKVRPAWKDFRVDVRNLPLEVTQEELREMVHLTTPSKVAVSLPVGGRYRTGSLSFTTREEADLAFSQLSGTGLPDLKLRKAWAVYRLRVKGLPADTREEDLREVLRGGYEPFQVDFPRSRKGNPKGEAVLRFRTYDQLVAAIGRLYGRDSPMDEVENQARWASAGEGMSFDDPAGSLEEELAR
Sbjct:    1 DGEDARGVLSYAAWKTYPVRVNGLPGDANEGEVMAVFSKYMPYDVEVLPVEASEAADGNEGGTRGAYLRFARRIQGVECASEMQDVSVRNNVLQVRRAWEKVYPLLIEAASGEGKVTADELEQVLAPLKRMKDSSLLDAELLKEGAAAVIRFGSQTGAEEGLGVLEAGAGSGRRKVRPAWKDFRVDVRNLPLEVTQEELREMVHLTTPSKVAVSLPVGGRYRTGSLSFTTREEADLAFSQLSGTGLPDLKLRKAWAVYRLRVKGLPADTREEDLREVLRGGYEPFQVDFPRSRKGNPKGEAVLRFRTYDQLVAAIGRLYGRDSPMDEVENQARWASAGEGMSFDDPAGSLEEELAR 356          

HSP 2 Score: 380.563 bits (976), Expect = 1.321e-113
Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0
Query:  126 VLATFQVPSLKYAREIAHSFHHDESWGDRITVHQEQETFPVFISGLPEGVSGSELKKQIDRAGASDPKQRRVMGGSEPASESKGQSKSLLTETAIDAYDTYAVFRCPDKYSSMGLLQGSFQLAPVGPKARGNTGEKRLGAGAENGAGATEAEAQAEGNAGERMVEVEEAGQEGRGEGDGEDARGVLSYAAW 316
            VLATFQVPSLKYAREIAHSFHHDESWGDRITVHQEQETFPVFISGLPEGVSGSELKKQIDRAGASDPKQRRVMGGSEPASESKGQSKSLLTETAIDAYDTYAVFRCPDKYSSMGLLQGSFQLAPVGPKARGNTGEKR GAGAENGAGATEAEAQAEGNAGERMVEVEEAGQEGRGEGD EDARGVLSYAAW
Sbjct:  369 VLATFQVPSLKYAREIAHSFHHDESWGDRITVHQEQETFPVFISGLPEGVSGSELKKQIDRAGASDPKQRRVMGGSEPASESKGQSKSLLTETAIDAYDTYAVFRCPDKYSSMGLLQGSFQLAPVGPKARGNTGEKRQGAGAENGAGATEAEAQAEGNAGERMVEVEEAGQEGRGEGDVEDARGVLSYAAW 559          
BLAST of EWM28236.1 vs. NCBI_GenBank
Match: gi|298709705|emb|CBJ31510.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 141.739 bits (356), Expect = 6.006e-33
Identity = 67/162 (41.36%), Postives = 104/162 (64.20%), Query Frame = 0
Query:  751 EGKWVKMLVDTDTTQKIIKGGHILSYRALVLVGNLKGCGGWGVGKGATLEEAQIRAYRAAK--KNLIHIDLYRNRCITTDLYGKHNNCRIYIQAGQPNRPHKEGRMINDMLRIMGVECGEARSIGRRNPYSVVRALFHAISKHEGVEALSRKRGRRLISVSK 910
            +G+W ++LV TD   K +KGG  + YRALV VGNL G GG+ +GK  T   A   A R AK   NL++++ Y+   +  DL GKHN  ++YI +  P    + G++  D+L  MG+  G  + IGRRN YS++ A+F A++KH G+E+++R RG+R++S+ +
Sbjct:  202 QGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWSRPPGSGMRAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKRILSLQR 363          
BLAST of EWM28236.1 vs. NCBI_GenBank
Match: gi|1210518988|dbj|GAX22149.1| (small subunit ribosomal protein S5 [Fistulifera solaris])

HSP 1 Score: 140.969 bits (354), Expect = 1.888e-32
Identity = 72/185 (38.92%), Postives = 113/185 (61.08%), Query Frame = 0
Query:  727 QEEEEEKEEESYAGRDVNPFAIHPEGKWVKMLVDTDTTQKIIKGGHILSYRALVLVGNLKGCGGWGVGKGATLEEAQIRAYRAAKKNLIHIDLYRNRCITTDLYGKHNNCRIYIQAGQPNRPHKEGRMINDMLRIMGVECGEARSIGRRNPYSVVRALFHAISKHEGVEALSRKRGRRLISVSKA 911
            Q+++EE + +     D N  A    G+W +MLV  D T K+ +GG + SYRALV+ GNL GCGG+G+GK      A   A R  K+N+  +D Y+   +T+DL GK N+C++Y+++       +   +I ++L+  G+    A+S G RNPY+V RA F A+  HE +E ++ KRG+RL+S+ +A
Sbjct:  216 QDDDEEGDFDPEVFLDPNQLA---HGEWSEMLVTVDRTTKLWRGGRLESYRALVIGGNLNGCGGFGIGKSKDPINAVAVASRKCKRNIFFVDRYQGNGLTSDLAGKQNSCKVYLRSTDDG--LRGNHLIREILKRFGITNCVAKSHGNRNPYNVTRATFKALMTHESIEDIALKRGKRLVSIDRA 395          
BLAST of EWM28236.1 vs. NCBI_GenBank
Match: gi|1210517931|dbj|GAX23188.1| (small subunit ribosomal protein S5 [Fistulifera solaris])

HSP 1 Score: 140.198 bits (352), Expect = 4.084e-32
Identity = 72/185 (38.92%), Postives = 113/185 (61.08%), Query Frame = 0
Query:  727 QEEEEEKEEESYAGRDVNPFAIHPEGKWVKMLVDTDTTQKIIKGGHILSYRALVLVGNLKGCGGWGVGKGATLEEAQIRAYRAAKKNLIHIDLYRNRCITTDLYGKHNNCRIYIQAGQPNRPHKEGRMINDMLRIMGVECGEARSIGRRNPYSVVRALFHAISKHEGVEALSRKRGRRLISVSKA 911
            Q+++EE + +     D N  A    G+W +MLV  D T K+ +GG + SYRALV+ GNL GCGG+G+GK      A   A R  K+N+  +D Y+   +T+DL GK N+C++Y+++       +   +I ++L+  G+    A+S G RNPY+V RA F A+  HE +E ++ KRG+RL+S+ +A
Sbjct:  216 QDDDEEGDFDPEVFLDPNQLA---HGEWSEMLVTVDRTTKLWRGGRLESYRALVIGGNLNGCGGFGIGKSKDPINAVAVASRKCKRNIFFVDRYQGNGLTSDLAGKQNSCKVYLRSTDDG--LRGNHLIREILKRFGITNCVAKSHGNRNPYNVTRATFKALMTHESIEDIALKRGKRLVSIDRA 395          
BLAST of EWM28236.1 vs. NCBI_GenBank
Match: gi|298709702|emb|CBJ31507.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 135.191 bits (339), Expect = 2.357e-31
Identity = 66/162 (40.74%), Postives = 103/162 (63.58%), Query Frame = 0
Query:  751 EGKWVKMLVDTDTTQKIIKGGHILSYRALVLVGNLKGCGGWGVGKGATLEEAQIRAYRAAK--KNLIHIDLYRNRCITTDLYGKHNNCRIYIQAGQPNRPHKEGRMINDMLRIMGVECGEARSIGRRNPYSVVRALFHAISKHEGVEALSRKRGRRLISVSK 910
            +G+W ++LV TD   K +KGG  + YRALV VGNL G GG+ +GK  T   A   A R AK   NL++++ Y+   +  DL GKHN  ++YI +       + G++  D+L  MG+  G  + IGRRN YS++ A+F A++KH G+E+++R RG+R++S+ +
Sbjct:  141 QGQWAEILVHTDRVTKTVKGGMEIQYRALVTVGNLHGVGGFAIGKADTPAVAITEASRKAKLLHNLVYVERYKQASLCQDLVGKHNGSKVYIWS-------RAGKLSRDILYNMGITDGACKIIGRRNKYSMIYAMFDALAKHRGIESIARGRGKRILSLQR 295          
BLAST of EWM28236.1 vs. NCBI_GenBank
Match: gi|1072223633|gb|OEU08388.1| (30S ribosomal protein S5 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 128.642 bits (322), Expect = 1.138e-30
Identity = 64/160 (40.00%), Postives = 104/160 (65.00%), Query Frame = 0
Query:  757 MLVDTDTTQKIIKGGHILSYRALVLVGNLKGCGGWGVGKGATLEEAQIRAYRAAKKNLIHIDLYRNRCITTDLYGKHNNCRIYIQAGQPNRPHKEGRMINDMLRIMGVECGEARSIGRRNPYSVVRALFHAISKHEGVEALSRKRGRRLISVSKARYLGL 916
            ML+ TD   K+ +GG ++S+RALV+ GN KGCGG+G+GK    E+A   A R AK+N+  +D +RN  IT DL G+ N+C++ ++    N   +   +  ++L++ G+    A++ G RN Y+VVRA F A+  HE ++ ++ KRG RL+++ KA+ LG+
Sbjct:    1 MLIRTDRVSKMWRGGRVVSFRALVIGGNTKGCGGFGLGKAFEPEDAVEIACRMAKRNIFFVDRFRNMTITRDLVGRQNSCKVQLRV--TNNGLRGNPLCCEILKLFGITNVVAKAHGSRNHYNVVRATFKALLTHESLDDIAMKRGIRLVNLEKAKRLGI 158          
BLAST of EWM28236.1 vs. NCBI_GenBank
Match: gi|219110018|ref|XP_002176761.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411296|gb|EEC51224.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 122.865 bits (307), Expect = 2.091e-26
Identity = 69/184 (37.50%), Postives = 107/184 (58.15%), Query Frame = 0
Query:  728 EEEEEKEEESYAGRDVNPFAIHPEGKWVKMLVDTDTTQKIIKGGHILSYRALVLVGNLKGCGGWGVGKGATLEEAQIRAYRAAKKNLIHIDLYRNRCITTDLYGKHNNCRIYIQAGQPNRPHKEGRMINDMLRIMGVECGEARSIGRRNPYSVVRALFHAISKHEGVEALSRKRGRRLISVSKA 911
            ++ +  EEE     D N    H  G+W +ML+    T K+ +GG + SYRALV+ GN  GCGG+G+GK      A   A R  KKN+  +D Y+N  IT DL GK N+C   + + + N  H    ++ ++L+  G+     ++ G RNP++VVRA F A+  HE +E ++ KRG+R++S+ +A
Sbjct:  197 QKSDMNEEEPEVRLDPNQ---HVHGEWSEMLITVGRTTKLWRGGRLESYRALVIGGNTNGCGGFGIGKSWDPVLAVDVAGRNCKKNIFFVDRYQNDGITRDLVGKQNSCIAKVMS-RDNGLHGNP-LMREILKRFGITNASCKAHGNRNPFNVVRATFKALMTHESLEDIALKRGKRILSLDRA 375          
BLAST of EWM28236.1 vs. NCBI_GenBank
Match: gi|397596461|gb|EJK56771.1| (hypothetical protein THAOC_23280 [Thalassiosira oceanica])

HSP 1 Score: 122.865 bits (307), Expect = 1.266e-25
Identity = 74/196 (37.76%), Postives = 115/196 (58.67%), Query Frame = 0
Query:  725 DVQEEEEEKEEESYA----GRDVNPFAIHPEGKWVKMLVDTDTTQKIIKGGHILSYRALVLVGNLKGCGGWGVGKGATLEEAQIRAYRAAKKNLIHIDLYRNRCITTDLYGKHNNCRIYIQAGQPNRPHKEGRMINDMLRIMGVECGEARSIGRRNPYSVVRALFHAISKHEGVEALSRKRGRRLISVSKARYLGL 916
            D ++E EEK +E       G D N  A    G W +  V  D  QK+ +GG  + YRALV+ GN  G  G+G+GK  +  EA I+A +  K+N+ ++D Y N  +T DL G+HN+C++ I+A  P+       +I ++L+  G+     +S G RNPY+VV A F A+   E +E ++ KRG++LI++ +AR LG+
Sbjct:  325 DHEKEREEKPDEILEMIKNGEDPNQEAF---GPWSECTVKVDRVQKVERGGTTVRYRALVIGGNGNGAAGFGIGKALSPNEAIIKAGKHCKRNVFYVDRYLNSGVTYDLAGRHNSCKVQIRAVTPDYGLHGHPLICEILKFSGISDASTKSHGNRNPYNVVYATFKALMTQESLEEVALKRGKKLINMQRARRLGI 517          
BLAST of EWM28236.1 vs. NCBI_GenBank
Match: gi|676382031|ref|XP_009034294.1| (hypothetical protein AURANDRAFT_22111 [Aureococcus anophagefferens] >gi|323454834|gb|EGB10703.1| hypothetical protein AURANDRAFT_22111 [Aureococcus anophagefferens])

HSP 1 Score: 114.005 bits (284), Expect = 5.274e-25
Identity = 66/162 (40.74%), Postives = 99/162 (61.11%), Query Frame = 0
Query:  750 PEGKWVKMLVDTDTTQKIIKGGHILSYRALVLVGNLKGCGGWGVGKGATLEEAQIRAYRAAKKNLIHIDLYRNRCITTDLYGKHNNCRIYIQAGQPNRPHKEGRMINDMLRIMGVECGEARSIGRRNPYSVVRALFHAISKHEGVEALSRKRGRRLISVSKA 911
            PEG+W + +V  D  QK+++GG I+ YRALV VGNL G GG+  GKG + ++A  RA R AK +L  +D +R+  +  D+ GKHNNC + I A  P +    G +   ++  +G      ++ GRR+PYS V A F A++    VE ++RKRGRR++ +  A
Sbjct:   41 PEGRWAETIVKIDRVQKVVRGGTIMRYRALVAVGNLMGAGGFAFGKGHSPQDAVARASRRAKTDLRFVDRHRDVALAHDVRGKHNNCTVDIYAVPPGKGMVGGALGRAIMTQLGFSSFTIKARGRRSPYSYVAATFDALANLASVEDIARKRGRRILEIEHA 202          
The following BLAST results are available for this feature:
BLAST of EWM28236.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110581|gb|EWM28236.1|0.000e+0100.0030s ribosomal protein s5 [Nannochloropsis gaditana... [more]
gi|553181524|ref|XP_005853580.1|1.321e-11399.72serine threonine protein, partial [Nannochloropsis... [more]
gi|298709705|emb|CBJ31510.1|6.006e-3341.36conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210518988|dbj|GAX22149.1|1.888e-3238.92small subunit ribosomal protein S5 [Fistulifera so... [more]
gi|1210517931|dbj|GAX23188.1|4.084e-3238.92small subunit ribosomal protein S5 [Fistulifera so... [more]
gi|298709702|emb|CBJ31507.1|2.357e-3140.74conserved unknown protein [Ectocarpus siliculosus][more]
gi|1072223633|gb|OEU08388.1|1.138e-3040.0030S ribosomal protein S5 [Fragilariopsis cylindrus... [more]
gi|219110018|ref|XP_002176761.1|2.091e-2637.50predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|397596461|gb|EJK56771.1|1.266e-2537.76hypothetical protein THAOC_23280 [Thalassiosira oc... [more]
gi|676382031|ref|XP_009034294.1|5.274e-2540.74hypothetical protein AURANDRAFT_22111 [Aureococcus... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2451rna2451Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications