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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100004g55.9232.mrna |
Orig protein id | gnl|cribi|Naga_100004g55.9232 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002459.1 | supercontig | CM002459.1:351807..352028 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2422 ID=rna2422|Name=rna2422|organism=Nannochloropsis gaditana|type=mRNA|length=4489bp CCAGGCATCGTGAAACACGACGCGAAGCGATATTACTTTTTCACAGGAGT ATACTGTAACCCTCGAAGTTTTCAAATTACCATCCTCACCGCATTCTCAT GCCCTAGCATTCACTTTTGCTGCAGGGGCAATCATGACTTGTGGCTTCAT TTCGCGACAAGCCGGGCCCTAGCTAGGTGGCAATCCAGCCGACGGTCATC CAGGGTCATCGTCCCGGCTGCAGCATGTCAAGCACAACTTTATGTACATA CCACACATGGATAATTCGAAAGCAAAGAAGACGACGAAGAAGATCGTGCC TTTCAGAAACGAAATTTCGCACTTGGATGGTTTGTGGTACCACACAGCTG CATCTTGCGTACTTCCTGATCCCGCTGCTCTCCTATCTTTTCACCACAAT TGCGGCATTTCGGCCCCCTGCTTCTCCATGGCACGGGCGATCATTTCTTA CGCTTCCTCGCGCGGTCGCGGACAGAAACGTGCCAGCTTCATCGGGAGAG GAGATCTGGAAAAGCAAGTACGGGACGACGTCCGCCGCCGCGTCACGTCC CCGCTCTTCCTTCCCCCCGGCTGCCCATCATTTTTCCGCTTCACCTGACC GACGACGCTCCGGTCGAAATGACAGGAGCAAAAAGGAATGGGAAAGGTCA GCACCAGAAGAGTTTCTTCTGATTTTGACGCGACTACGCGCGGAGGAAAA TTCCGGGCGAGCCCCGCTCCTGGACGAGGAGACCGAGAGAGACATAGGAC ATGTTATCAAGCTGGTTCGGGCATTGGCAAACCGACAGTGGGAGCAAGCT GAAGAATCTGCGGCATTGCTGTGTCGCAGTCCCCTCTTGGACACGGTGCT GTCGCGGATGGTCGTGTATGCAGCAACGCAACGGAATGAACCTGACCTGG CCCTGGAGATATTGGGGGGAATGCGCGAGAAGCGCATCGACGTAGACGCG TTCATGGCTTCTCTGGTCGCCAAGGCCGCAGCAACAGACCGGCGTTGGAT GCCTGTGGTGGAGGTGATCCGCGCTCAGCTCTCCAGCAACCCGGGGGGGG ACCTGATCATGCCTGGGACTCCCCAGGGCCGTCGACACGGCGGTTTCACG CAGGCCTTGGCCTCCACGATTGAACGGGGGAAATTTTACTCCTCCTCCTT CCTTGTGGATGCTTTGTTGCAGTTCCGAATGGTGGATCTGTTCACGGCGA AGGTTGCCCTCAAATTCTACCGCTTCAGTCGCACGCCGGCGAGGGGGCTA CCCTGGATCACGACCGCCCGGGCCATTGGCCTGATTCCCGATGCGGACCT GGATTTCGAGGTGGGCAGGGTCTACAAAAGCTTGGGGATGTGGCGGGAAG CCGTTGCCTTGCTCTCGGAAATGGTGGAGCAGAAGCGAGCAGTGGAGGAC GAGCACGTGGGGGTGGTCCTGTCGGCATGTCACCAGGCCGGCGAGTGGAA GGAGTGCCTGGCCACCCTGAGCAAAATGCGAGAATGGGGCCTAAGTGTGG GCCGCGTCTCCTACTTGATCGTCCTCCGCCTCTTGCTGGAGAAGCGGCGG CTCGACCAAGTCCGCTCAGTGCTTCAGCAGATGGAGGCGCAAGGCAGTCC GTTGGACGCCGAGACCGCCCGGCTCGCTCTCTTTACACTGGCCAAGCGCG GCCCCGTCTACTCCAGCCTGGAATTCCTCAAGCTCATGCCGGTCTTTGGA GTAGAGCCCGACCTGGTTTCGTACACGGCGGTGATCCGCGCCTGCGCCCG CTTCCAGCAACCGGATCTGGCGCTGGAGGTGCTGACTTTGATGGCGAAGA ACGGGATGGCCCCAGACGTGTTGGCATGCGCGACAGCCATGGATGCGCTT TCGGGCGCCGCCAGGTGGGACGAGGCCTTTGCTCTTTTCGACGGTTGCCG CTCCCAAGGCCTGCGTCCCGACATCAAGTGCTGGACGCAGGTGCTTGGCA TGGCCACGCAGGCTGGGCGGTGGGATTTGTTCCCGGCCTACTTGGAAGCA GCGGTGGGGGAGGCACGCGTCCACAAAACAGGCCTGGATTTACGATTTTT TGCGACGGTGATCAACGCCTGTGCAGAGGGCAATCGTACGGATGAAGCCT TGGCCGTGCTGGCCAGCGTGCGTTCATACGGCTTAATGCCCAACGTTGTG TGCTTCACGGCGGCCGCCAAGGCGTGCTTGGCCCGACGTCGGTGGCGCGA CGCCCTTGGCTTGTTGGAGGAGGCACAAAAAGAGGGAGTTCCGGCGGATG CAACCCTATACAGGACAGTTCTGGGCTGCTGCTGGCGGGCACGGCAATGG CAGTCGGTGCTCAAGTTGTACGGGGAGATGCTGGAGAGGGGCTTGGAGGT AGACTCGCGCATGTACACCTCGCTGATGGACGCTCTGGCGGGGGCAGGGC AGTCGGAGCTTGCGGCTAATGTGCTCCAGGACATGGTTGCCAATGGGATC GCGCCTGTGGATGCCACATGGAGCGCATTTTTCCAGTCTTGGTACCATAA GGGAGAGTATGGGACACCGTGGAAGTTGATTGAAGAGCTGGTCCGATGGG AGGATGAAGGGGGAATGGACAGTAACGCGGCGTGGATGCCACGCAAAGTC ATTGTAAGCGATGCAGACCAAAGGAGGCCTTCGGCCGACGGCTCAAGAGC CGGGAGCAGACAGGGGCCCAGAGCGGGGCTTGGCACGGGTCCAGGTCCCA GGACTCTTGCGGACTTGATGCATGTGTGCGCGCGACGGGAGGACTGGGGG GAGGTGCTTGAATTGCAACGTCGGATAACGGACATGGGTTTGCCACCCAC GGCTACGCGGGCGCCTCATCTCGTTGTTCGCGCTTATGCAGAGCTTGGGC GTTGGACAGAGGCGCAGCAATTTCTATGTGATTGCATGCACCAAGGAGTT TCTACCGAGAGTACGCAAAATTACACAAGTCATGACGAGAGGGCAAGTGA CCAGGCAAGACAGGTACCTGCGACTGAAAACTCTCGGCCTTTTAGCGTCA GCTGGAGCCGGACGTACGGGGCATTGCTGACGTTGTGCTCGAAGAGGATC GAGCCGGTTCGAGCCTTGGCTTTGTTGAAGGACATGGAGGACAAACAGTT GGCCCCGGATGCGGAGGCCTACCACGCTGTCATGGATGCCTGTGCACAAG CAGGTATGAAAGGAGAAGTGCGCATGGTTTTTGAGAAGCTGCGGGCACGG GCTGACCTCCTTCCTCGTGTGGAATCCTTCACAATCATGTTGGATCTCTG CGCGCGGGAGGGAGGAAAGGGGGAGGAAGCATTGCGATTAATGGATGATT TGGAAGGCCTAGGCTTGACCCCAGACATGCTTTGTTTCAACGCCGCCATG GAAGCCTGCCGGGAAGCCTCCATGTTGGAGACGGATCCAGGCGAGGGTCG ATATCGACGGGCAATGCGGAAATGGAGGGACGTGGAGGTGATGCACACGT ACAACAGCGAAATGGCAGTCCTAGCGACGAGGAAGGGGGGACAGGATGGC GAAGCGTCCTCGACAGCGTTGCGGTATCTCAGAGAGATGCAAGCCAACGG CATACCCCGGGACACCGACTCCTTCAACATGGCGCTTGAGGCGTGCGCAC GGGGGGGGAATCTCCAAGAGGCCCGAACGGTCTTTGAAGAGCTTCAAGCC GCGGCGACCGAGGAGGCGCAAGGTCCCTCGGCCAGGCCGGACATTTTTTC CTACATCACGTTGGCTAACGCGTTGGCGAAGGATGGTCGCGACAGCGAGG CCATGGCGTGGCTAAATCATATGGTAGGATTGGCAGTCGATGAGGCAAAA GCAGTAGTAGGAGCAGCCCCAAACAAGACAAAAGGAAGAACAAATGCAGG GAGAAAGGCTATCCAACCTTCCGGAAATTCAGAACGACTGGGGATGAACA AGTCCAGCACGAGCAGAGTTGGCACAAATATACTACTCGCCGATGAAACG CCTGCGCTTCCTTCCCCCTCGACGCCGATAGGTGATTTAGAAGAAGCTGA CGGCTTCACACCCTCTTCACTTCTGCACTTGTCAAGCGCCAGTATTCGGA AAAAGACGCGCTGGCCGGCCTACTATAGGAACCTATGGCCTCAAACAGTC AAGACGCTCAGTAAAAATATACTTGTTCTAGCTAGGTGTGCTTCTCCACG TGAACAGGCCACCCGTTGTGCAGATATAGGAAAATTGCTAGAATTTCTGG ACTCTCATGTGCCGATTCTGAACACCCAAGTCGTAGCGGAACAACTGGTC GGTATGGGCATTTGTAGCACAAAACACATCAAAACACTGACAGGGAACGC ATTGAAGATGCGTTGGAGGGAAAACCAGGTTTGAGCTAGAAAGATACATT CATGAACAGTGTGAATAATTGCAGGGGCACCGCGACATGAGAAATAAACC CAGTCAACAAAGGCAAAGTAAAATTGAAGAGTACCTGGCGACAAGCTTTT CGGCATCTAAAAAGAAATATAAAATAAGTCTACTTCAAA back to topprotein sequence of rna2422 >rna2422-protein ID=rna2422-protein|Name=rna2422|organism=Nannochloropsis gaditana|type=polypeptide|length=73bp MFLIGMIVTTPLVRWPLTSSDLTIRSFLSQTRPATSFYSTLCLFIRDHSL RKMEKRFESEVHYVYIGGTMLNI back to topmRNA from alignment at CM002459.1:351807..352028- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2422 ID=rna2422|Name=rna2422|organism=Nannochloropsis gaditana|type=mRNA|length=222bp|location=Sequence derived from alignment at CM002459.1:351807..352028- (Nannochloropsis gaditana) ATGTTTCTCATTGGTATGATCGTCACGACTCCATTGGTTAGGTGGCCGTT
AACTTCCAGTGACTTGACCATCAGGAGCTTTTTGTCGCAGACGAGACCCG
CAACAAGCTTTTACTCGACCCTCTGTTTGTTTATACGAGATCATTCATTG
AGAAAGATGGAAAAAAGGTTTGAGAGTGAGGTACACTACGTGTACATTGG
CGGTACTATGTTAAACATTTGA back to topCoding sequence (CDS) from alignment at CM002459.1:351807..352028- >rna2422 ID=rna2422|Name=rna2422|organism=Nannochloropsis gaditana|type=CDS|length=222bp|location=Sequence derived from alignment at CM002459.1:351807..352028- (Nannochloropsis gaditana) ATGTTTCTCATTGGTATGATCGTCACGACTCCATTGGTTAGGTGGCCGTT AACTTCCAGTGACTTGACCATCAGGAGCTTTTTGTCGCAGACGAGACCCG CAACAAGCTTTTACTCGACCCTCTGTTTGTTTATACGAGATCATTCATTG AGAAAGATGGAAAAAAGGTTTGAGAGTGAGGTACACTACGTGTACATTGG CGGTACTATGTTAAACATTTGA back to top
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