EWM28271.1, cds2375 (CDS) Nannochloropsis gaditana

Overview
NameEWM28271.1
Unique Namecds2375
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:257239..257319 -
Alignment locationCM002459.1:257036..257131 -
Alignment locationCM002459.1:256846..256905 -
Alignment locationCM002459.1:256377..256652 -
Alignment locationCM002459.1:256099..256245 -
Alignment locationCM002459.1:255367..255960 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28271.1
Productargininosuccinate synthase
Orig transcript idgnl|cribi|Naga_100004g13.9202.mrna
GeneASS
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:257239..257319 -
CM002459.1supercontigCM002459.1:257036..257131 -
CM002459.1supercontigCM002459.1:256846..256905 -
CM002459.1supercontigCM002459.1:256377..256652 -
CM002459.1supercontigCM002459.1:256099..256245 -
CM002459.1supercontigCM002459.1:255367..255960 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006526arginine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004055argininosuccinate synthase activity
Vocabulary: INTERPRO
TermDefinition
IPR023434Arginosuc_synth_type_1_subfam
IPR018223Arginosuc_synth_CS
IPR001518Arginosuc_synth
IPR014729Rossmann-like_a/b/a_fold
IPR024074AS_cat/multimer_dom_body
Homology
BLAST of EWM28271.1 vs. NCBI_GenBank
Match: gi|553182191|ref|XP_005853695.1| (argininosuccinate synthetase [Nannochloropsis gaditana CCMP526] >gi|422295367|gb|EKU22666.1| argininosuccinate synthetase [Nannochloropsis gaditana CCMP526] >gi|585110616|gb|EWM28271.1| argininosuccinate synthase [Nannochloropsis gaditana])

HSP 1 Score: 863.218 bits (2229), Expect = 0.000e+0
Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 0
Query:    1 MAGKPKCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQLKEDFDKVREKALKCGASKVYIEDLREEFVKDYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCAQALDAAIQTLAPWRETEFIERFKGRQDLLDYAAAHNIQVEATKKASYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKAEKVRIDFEEGVPVKVTNHDDGTVKTEPLELFLYLNELAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILRVAHMDLEGLCVDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTKASIDFTQRRVAGGVELSLYKGNVTVLGRESPYSLYSADLASMEIEGGGAAFDYVPMDAQGFIRINAVRLRAYNALERTFNK 417
            MAGKPKCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQLKEDFDKVREKALKCGASKVYIEDLREEFVKDYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCAQALDAAIQTLAPWRETEFIERFKGRQDLLDYAAAHNIQVEATKKASYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKAEKVRIDFEEGVPVKVTNHDDGTVKTEPLELFLYLNELAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILRVAHMDLEGLCVDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTKASIDFTQRRVAGGVELSLYKGNVTVLGRESPYSLYSADLASMEIEGGGAAFDYVPMDAQGFIRINAVRLRAYNALERTFNK
Sbjct:    1 MAGKPKCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQLKEDFDKVREKALKCGASKVYIEDLREEFVKDYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCAQALDAAIQTLAPWRETEFIERFKGRQDLLDYAAAHNIQVEATKKASYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKAEKVRIDFEEGVPVKVTNHDDGTVKTEPLELFLYLNELAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILRVAHMDLEGLCVDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTKASIDFTQRRVAGGVELSLYKGNVTVLGRESPYSLYSADLASMEIEGGGAAFDYVPMDAQGFIRINAVRLRAYNALERTFNK 417          
BLAST of EWM28271.1 vs. NCBI_GenBank
Match: gi|299470329|emb|CBN78379.1| (argininosuccinate synthetase [Ectocarpus siliculosus])

HSP 1 Score: 629.402 bits (1622), Expect = 0.000e+0
Identity = 299/406 (73.65%), Postives = 346/406 (85.22%), Query Frame = 0
Query:    6 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQLKEDFDKVREKALKCGASKVYIEDLREEFVKDYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCAQALDAAIQTLAPWRETEFIERFKGRQDLLDYAAAHNIQVEATKKASYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKAEKVRIDFEEGVPVKVTNHDDGTVKTEPLELFLYLNELAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILRVAHMDLEGLCVDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTKASIDFTQRRVAGGVELSLYKGNVTVLGRESPYSLYSADLASMEIEGGGAAFDYVPMDAQGFIRINAVRLRAYNAL 411
            K VLAYSGGLDTSVIL WL  +GF+VICYCANVGQ  ED+D + +KA  CGASKVYIEDL EEFV D+VF AVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAK++SHGATGKGNDQVRFE+CAQALD+ I T+APWR+ EF+E+FKGR DLL YA    I V +T KASYS+DENLYHTSYESG+LEDPM  P  EMFKMTVDP  APDK E +RI+F +G+PVKVTN  DGTVK +PLELF YLNE+AG++G+GRIDIVENRFVGIKSRG+YETP G +LR  H+DLEGLC+D+EV+R+++    EF+RLCYNGFW+APEMEL K +IDF+QR V G VE++LYKGN+TV GRES  SLYSADLASMEIE GG + DY P DAQGFIRIN+ RL+AY++L
Sbjct:   17 KVVLAYSGGLDTSVILKWLSGQGFEVICYCANVGQQGEDYDAITKKAKDCGASKVYIEDLCEEFVTDFVFEAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKYVSHGATGKGNDQVRFEMCAQALDSKITTIAPWRDAEFLEKFKGRGDLLAYATEQGIPVSSTPKASYSIDENLYHTSYESGILEDPMTAPPPEMFKMTVDPLKAPDKVESLRIEFAKGIPVKVTNKTDGTVKEKPLELFCYLNEVAGRNGIGRIDIVENRFVGIKSRGIYETPAGTLLREVHLDLEGLCLDKEVVRIRDQLSEEFARLCYNGFWYAPEMELVKHAIDFSQRDVEGAVEVALYKGNMTVTGRESAKSLYSADLASMEIENGG-SIDYEPADAQGFIRINSTRLKAYHSL 421          
BLAST of EWM28271.1 vs. NCBI_GenBank
Match: gi|813123544|ref|XP_012196551.1| (argininosuccinate synthase [Saprolegnia parasitica CBS 223.65] >gi|641539080|gb|KDO32901.1| argininosuccinate synthase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 616.305 bits (1588), Expect = 0.000e+0
Identity = 292/410 (71.22%), Postives = 345/410 (84.15%), Query Frame = 0
Query:    6 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQLKEDFDKVREKALKCGASKVYIEDLREEFVKDYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCAQALDAAIQTLAPWRETEFIERFKGRQDLLDYAAAHNIQVEATKKASYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKAEKVRIDFEEGVPVKVTN--HDDGTVKTEPLELFLYLNELAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILRVAHMDLEGLCVDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTKASIDFTQRRVAGGVELSLYKGNVTVLGRESPYSLYSADLASMEIEGGGAAFDYVPMDAQGFIRINAVRLRAYNALER 413
            K VLAYSGGLDTS+IL WL+ KGF V+CYCANVGQ  E+F+KV+ KA+  GA+KVYIEDLR+EFV DY++ AV+ANA YE RYLLGTSLARPVIAK+ VEIA+KEG K+++HGATGKGNDQVRFELCAQAL+A+++T+APWR+ EFIE FKGRQDLL YA AHNI V+AT KA YSVDENLYHTSYESGMLEDPM  PL EMFKMTVDP+ APD AEK+RI FE GVPVKV N       V T+PLELFL LN L GKHGVGRIDIVENRFVGIKSRGVYETPGG ILR AH+DLEGLC+DREV++L++   ++F+  CYNGFWFAPEM+  + +I F+Q+ +AG V++ LYKGNVT+ GR S  +LYSADLASM++EGGGA  +Y P DAQGFIRINA RL+AYN +++
Sbjct:   10 KVVLAYSGGLDTSIILKWLVNKGFQVVCYCANVGQFGENFEKVQAKAMALGAAKVYIEDLRKEFVVDYLWPAVQANAIYESRYLLGTSLARPVIAKKMVEIAEKEGCKYVAHGATGKGNDQVRFELCAQALNASLKTIAPWRDPEFIEAFKGRQDLLAYAKAHNIPVDATPKAPYSVDENLYHTSYESGMLEDPMTGPLPEMFKMTVDPKVAPDAAEKIRITFENGVPVKVANLTTPSSPVLTDPLELFLELNRLGGKHGVGRIDIVENRFVGIKSRGVYETPGGTILRDAHLDLEGLCMDREVMKLRDALSVKFAEFCYNGFWFAPEMDFVRHAIAFSQKAIAGHVDVELYKGNVTITGRYSDVALYSADLASMDMEGGGANIEYNPSDAQGFIRINATRLKAYNCIQK 419          
BLAST of EWM28271.1 vs. NCBI_GenBank
Match: gi|669148152|ref|XP_008609638.1| (argininosuccinate synthase [Saprolegnia diclina VS20] >gi|530738615|gb|EQC36857.1| argininosuccinate synthase [Saprolegnia diclina VS20])

HSP 1 Score: 614.764 bits (1584), Expect = 0.000e+0
Identity = 293/410 (71.46%), Postives = 344/410 (83.90%), Query Frame = 0
Query:    6 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQLKEDFDKVREKALKCGASKVYIEDLREEFVKDYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCAQALDAAIQTLAPWRETEFIERFKGRQDLLDYAAAHNIQVEATKKASYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKAEKVRIDFEEGVPVKVTN--HDDGTVKTEPLELFLYLNELAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILRVAHMDLEGLCVDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTKASIDFTQRRVAGGVELSLYKGNVTVLGRESPYSLYSADLASMEIEGGGAAFDYVPMDAQGFIRINAVRLRAYNALER 413
            K VLAYSGGLDTS+IL WL+ KGF V+CYCANVGQ  E+F+KV+ KA+  GA+KVYIEDLR+EFV DY++ AV+ANA YE RYLLGTSLARPVIAKR VEIA+KEG K+++HGATGKGNDQVRFELCAQAL+A+++T+APWR+ EFIE FKGRQDLL YA A NI V+AT KA YSVDENLYHTSYESGMLEDPM  PL EMFKMTVDP+ APD AEK+RI FE GVPVKV N       V T+PLELFL LN L GKHGVGRIDIVENRFVGIKSRGVYETPGG ILR AH+DLEGLC+DREV++L++   ++F+  CYNGFWFAPEM+  + +I F+Q+ VAG V++ LYKGNVT+ GR S  +LYSADLASM++EGGGA  +Y P DAQGFIRINA RL+AYN +++
Sbjct:   10 KVVLAYSGGLDTSIILKWLVNKGFQVVCYCANVGQFGENFEKVQAKAMALGAAKVYIEDLRKEFVVDYLWPAVQANAIYESRYLLGTSLARPVIAKRMVEIAEKEGCKYVAHGATGKGNDQVRFELCAQALNASLKTIAPWRDPEFIEAFKGRQDLLAYAKAQNIPVDATPKAPYSVDENLYHTSYESGMLEDPMTGPLPEMFKMTVDPKVAPDAAEKIRITFENGVPVKVANLTTPSSPVFTDPLELFLELNRLGGKHGVGRIDIVENRFVGIKSRGVYETPGGTILRDAHLDLEGLCMDREVMKLRDSLSVKFAEFCYNGFWFAPEMDFVRHAIAFSQKAVAGHVDVELYKGNVTITGRYSDVALYSADLASMDMEGGGANIEYNPSDAQGFIRINATRLKAYNCIQK 419          
BLAST of EWM28271.1 vs. NCBI_GenBank
Match: gi|970649774|gb|KUF88962.1| (voltage-gated potassium channel subunit beta [Phytophthora nicotianae])

HSP 1 Score: 608.601 bits (1568), Expect = 0.000e+0
Identity = 287/404 (71.04%), Postives = 338/404 (83.66%), Query Frame = 0
Query:    6 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQLKEDFDKVREKALKCGASKVYIEDLREEFVKDYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCAQALDAAIQTLAPWRETEFIERFKGRQDLLDYAAAHNIQVEATKKASYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKAEKVRIDFEEGVPVKVTNHDDGTVK-TEPLELFLYLNELAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILRVAHMDLEGLCVDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTKASIDFTQRRVAGGVELSLYKGNVTVLGRESPYSLYSADLASMEIEGGGAAFDYVPMDAQGFIRINAVRLRAY 408
            K VLAYSGGLDTS+IL WL  KGF+VICYCANVGQ  ED++KVR KAL  GA KVYIEDLREEFVK Y+F AVK+NA YE RYLLGTSLARPVIAK+QVEIAQ EGAK+++HGATGKGNDQVRFELCAQALDA ++T+APWR+ EFIE+FKGR DL+ YA   NI ++AT KA YSVDENLYHTSYE+GMLEDPM  P+ EMFKMTVDP+DAPD AE++++ FE+G+PV VTN    T + T  L+LFL LN LAGKHG+GRIDIVENRFVGIKSRG YETPGG ILR AH+DLEGLC+DREV+++++    +F+  CYNGFWFAPEM+  + ++DF+Q+ + G V L LYKGNVTV+GR S  +LYSADLASM+ EGGGA FDY P DAQGFIRINA RL+A+
Sbjct:   10 KVVLAYSGGLDTSIILKWLTNKGFEVICYCANVGQHGEDYEKVRAKALSLGAKKVYIEDLREEFVKHYIFEAVKSNAIYESRYLLGTSLARPVIAKKQVEIAQSEGAKYVAHGATGKGNDQVRFELCAQALDAQLKTIAPWRDAEFIEKFKGRADLIQYAKEQNIPIDATPKAPYSVDENLYHTSYEAGMLEDPMTAPMVEMFKMTVDPKDAPDAAEQIQVRFEKGIPVGVTNLTAKTPELTGALDLFLELNRLAGKHGIGRIDIVENRFVGIKSRGCYETPGGTILRHAHLDLEGLCMDREVMKVRDSLSAKFAEYCYNGFWFAPEMDFVRNAVDFSQQNITGFVNLELYKGNVTVIGRHSDEALYSADLASMDQEGGGANFDYNPADAQGFIRINATRLKAW 413          
BLAST of EWM28271.1 vs. NCBI_GenBank
Match: gi|325181184|emb|CCA15598.1| (unnamed protein product [Albugo laibachii Nc14] >gi|325181887|emb|CCA16342.1| unnamed protein product [Albugo laibachii Nc14])

HSP 1 Score: 607.831 bits (1566), Expect = 0.000e+0
Identity = 286/413 (69.25%), Postives = 342/413 (82.81%), Query Frame = 0
Query:    6 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQLKEDFDKVREKALKCGASKVYIEDLREEFVKDYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCAQALDAAIQTLAPWRETEFIERFKGRQDLLDYAAAHNIQVEATKKASYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKAEKVRIDFEEGVPVKVTNHDDGTVK--TEPLELFLYLNELAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILRVAHMDLEGLCVDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTKASIDFTQRRVAGGVELSLYKGNVTVLGRESPYSLYSADLASMEIEGGGAAFDYVPMDAQGFIRINAVRLRAYNALERTFN 416
            K VLAYSGGLDTS+IL WL  KGF+VICYCANVGQ  ED+ KV+EKAL  GA+KVYIEDLR EFV+D++F AVKANA YE RYLLGTSLARPVIAK+QVEIAQKEGA +++HGATGKGNDQVRFELCAQALDA +QT+APWR+ EFI +FKGR DLL+YA+  NI V+AT KASYS+DENLYHTSYE+G+LEDP+  P+ EMFKMTVDP+ APD+AEK++I F +GVPV + N    +    T PLELFL LNE   KHG+GRIDI+ENRFVGIKSRGVYETPGG ILRVAH+DLEGLC+DREVL++++    +F+   YNGFWFAPEM+  + +ID++QR V G V L LYKGNVTV+GR S  +LY ADLASM+ EGGG+ FDY P D+QGFIRINA RL+A+N L++  +
Sbjct:   10 KVVLAYSGGLDTSIILKWLANKGFEVICYCANVGQHGEDYTKVKEKALALGATKVYIEDLRSEFVEDFIFEAVKANAIYESRYLLGTSLARPVIAKKQVEIAQKEGASYVAHGATGKGNDQVRFELCAQALDAKLQTIAPWRDAEFINQFKGRADLLNYASEQNIPVDATPKASYSMDENLYHTSYEAGILEDPLTAPISEMFKMTVDPKVAPDQAEKIQIAFSKGVPVSLKNLSAPSTPELTNPLELFLSLNEYGRKHGIGRIDIIENRFVGIKSRGVYETPGGTILRVAHLDLEGLCMDREVLKVRDSLSAKFAEFAYNGFWFAPEMDFVRHAIDYSQRNVTGYVNLELYKGNVTVIGRHSELALYIADLASMDQEGGGSQFDYNPSDSQGFIRINATRLKAWNHLQKKLH 422          
BLAST of EWM28271.1 vs. NCBI_GenBank
Match: gi|301114519|ref|XP_002999029.1| (argininosuccinate synthase [Phytophthora infestans T30-4] >gi|262111123|gb|EEY69175.1| argininosuccinate synthase [Phytophthora infestans T30-4])

HSP 1 Score: 606.675 bits (1563), Expect = 0.000e+0
Identity = 287/404 (71.04%), Postives = 339/404 (83.91%), Query Frame = 0
Query:    6 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQLKEDFDKVREKALKCGASKVYIEDLREEFVKDYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCAQALDAAIQTLAPWRETEFIERFKGRQDLLDYAAAHNIQVEATKKASYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKAEKVRIDFEEGVPVKVTNHDDGTVK-TEPLELFLYLNELAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILRVAHMDLEGLCVDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTKASIDFTQRRVAGGVELSLYKGNVTVLGRESPYSLYSADLASMEIEGGGAAFDYVPMDAQGFIRINAVRLRAY 408
            K VLAYSGGLDTS+IL WL  KGF+VICYCANVGQ  ED++KVR KA+  GA KVYIEDLREEFVK Y+F AVK+NA YE RYLLGTSLARPVIAK+QVEIAQ EGAK+++HGATGKGNDQVRFELCAQALDA ++T+APWR+ EFIE+FKGR DL+ YA   NI ++AT KA YSVDENLYHTSYE+GMLEDPM  P+ EMFKMTVDP+DAPD AE++++ FE+G+PV VTN    T + T  LELFL LN+LAGKHG+GRIDIVENRFVGIKSRG YETPGG ILR AH+DLEGLC+DREV+++++    +F+  CYNGFWFAPEM+  + ++DF+Q+ + G V L LYKGNVTV+GR S  +LYSADLASM+ EGGGA FDY P DAQGFIRINA RL+A+
Sbjct:   48 KVVLAYSGGLDTSIILKWLTNKGFEVICYCANVGQHGEDYEKVRAKAMSLGAKKVYIEDLREEFVKHYIFEAVKSNAIYESRYLLGTSLARPVIAKKQVEIAQAEGAKYVAHGATGKGNDQVRFELCAQALDAQLKTIAPWRDAEFIEKFKGRADLIQYAKEQNIPIDATPKAPYSVDENLYHTSYEAGMLEDPMTAPMVEMFKMTVDPKDAPDAAEQIQVRFEKGIPVGVTNLTAKTPELTGALELFLELNKLAGKHGIGRIDIVENRFVGIKSRGCYETPGGTILRHAHLDLEGLCMDREVMKVRDSLSAKFAEFCYNGFWFAPEMDFVRNAVDFSQQNITGFVNLELYKGNVTVIGRYSDEALYSADLASMDQEGGGANFDYNPADAQGFIRINATRLKAW 451          
BLAST of EWM28271.1 vs. NCBI_GenBank
Match: gi|1173941410|gb|OQR90580.1| (argininosuccinate synthase [Achlya hypogyna])

HSP 1 Score: 605.905 bits (1561), Expect = 0.000e+0
Identity = 284/409 (69.44%), Postives = 342/409 (83.62%), Query Frame = 0
Query:    6 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQLKEDFDKVREKALKCGASKVYIEDLREEFVKDYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCAQALDAAIQTLAPWRETEFIERFKGRQDLLDYAAAHNIQVEATKKASYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKAEKVRIDFEEGVPVKVTN-HDDGTVKTEPLELFLYLNELAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILRVAHMDLEGLCVDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTKASIDFTQRRVAGGVELSLYKGNVTVLGRESPYSLYSADLASMEIEGGGAAFDYVPMDAQGFIRINAVRLRAYNALER 413
            K VLAYSGGLDTS+IL WL+ KGF VICYCANVGQ  E+FDKV+ KAL  GA+ VYI DLR EFV DY++ AV+ANA YE RYLLGTSLARPVI+K+ VEIA KEGA++++HGATGKGNDQVRFELCAQAL+A+++T+APWR+TEFIE+FKGRQDL+ YA    I ++AT KA YSVDENLYHTSYESGMLEDPM  P+ EMFKMTVDP+ AP++AEK+RI F  GVPVKVTN    G   T+PLELFL LN + GKHGVGRIDIVENRFVGIKSRGVYETPGG ILRVAH+DLEGLC+DREV++L++   ++F+  CYNGFWFAPEM+  + +I ++Q  + G V++ LYKGNVTV+GR S  +LYSADLASM++EGGGA  +Y P DAQGFIRINA RL+A+N +++
Sbjct:   10 KVVLAYSGGLDTSIILKWLVNKGFHVICYCANVGQFGENFDKVKAKALSLGAAAVYIADLRAEFVTDYIWPAVQANAIYESRYLLGTSLARPVISKKMVEIATKEGAQYVAHGATGKGNDQVRFELCAQALNASLKTIAPWRDTEFIEKFKGRQDLIAYAQEQGIPIDATPKAPYSVDENLYHTSYESGMLEDPMTGPMPEMFKMTVDPKVAPNEAEKIRIHFASGVPVKVTNLSHPGKELTDPLELFLELNRVGGKHGVGRIDIVENRFVGIKSRGVYETPGGTILRVAHLDLEGLCMDREVMKLRDSLSVKFAEFCYNGFWFAPEMDFVRHAIAYSQTNITGHVDMELYKGNVTVVGRYSDVALYSADLASMDLEGGGANIEYNPSDAQGFIRINATRLKAFNCVQK 418          
BLAST of EWM28271.1 vs. NCBI_GenBank
Match: gi|675166093|ref|XP_008891931.1| (argininosuccinate synthase [Phytophthora parasitica INRA-310] >gi|675214981|ref|XP_008916375.1| argininosuccinate synthase [Phytophthora parasitica INRA-310] >gi|566026969|gb|ETI49880.1| argininosuccinate synthase [Phytophthora parasitica P1569] >gi|567964258|gb|ETK89748.1| argininosuccinate synthase [Phytophthora parasitica] >gi|567992971|gb|ETL43158.1| argininosuccinate synthase [Phytophthora parasitica] >gi|568022264|gb|ETL96341.1| argininosuccinate synthase [Phytophthora parasitica] >gi|568052633|gb|ETM49506.1| argininosuccinate synthase [Phytophthora parasitica] >gi|568083324|gb|ETM98323.1| argininosuccinate synthase [Phytophthora parasitica INRA-310] >gi|568108075|gb|ETN22699.1| argininosuccinate synthase [Phytophthora parasitica INRA-310] >gi|570330652|gb|ETO78600.1| argininosuccinate synthase [Phytophthora parasitica P1976] >gi|570954389|gb|ETP19646.1| argininosuccinate synthase [Phytophthora parasitica CJ01A1] >gi|570989335|gb|ETP47584.1| argininosuccinate synthase [Phytophthora parasitica P10297] >gi|970633868|gb|KUF79336.1| Argininosuccinate synthase [Phytophthora nicotianae])

HSP 1 Score: 605.52 bits (1560), Expect = 0.000e+0
Identity = 287/404 (71.04%), Postives = 338/404 (83.66%), Query Frame = 0
Query:    6 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQLKEDFDKVREKALKCGASKVYIEDLREEFVKDYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCAQALDAAIQTLAPWRETEFIERFKGRQDLLDYAAAHNIQVEATKKASYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKAEKVRIDFEEGVPVKVTNHDDGTVK-TEPLELFLYLNELAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILRVAHMDLEGLCVDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTKASIDFTQRRVAGGVELSLYKGNVTVLGRESPYSLYSADLASMEIEGGGAAFDYVPMDAQGFIRINAVRLRAY 408
            K VLAYSGGLDTS+IL WL  KGF+VICYCANVGQ  ED++KVR KAL  GA KVYIEDLREEFVK Y+F AVK+NA YE RYLLGTSLARPVIAK+QVEIAQ EGAK+++HGATGKGNDQVRFELCAQALDA ++T+APWR+ EFIE+FKGR DL+ YA   NI ++AT KA YSVDENLYHTSYE+GMLEDPM  P+ EMFKMTVDP+DAPD AE++++ FE+G+PV VTN    T + T  L+LFL LN LAGKHG+GRIDIVENRFVGIKSRG YETPGG ILR AH+DLEGLC+DREV+++++    +F+  CYNGFWFAPEM+  + ++DF+Q+ + G V L LYKGNVTV+GR S  +LYSADLASM+ EGGGA FDY P DAQGFIRINA RL+A+
Sbjct:   10 KVVLAYSGGLDTSIILKWLTNKGFEVICYCANVGQHGEDYEKVRAKALSLGAKKVYIEDLREEFVKHYIFEAVKSNAIYESRYLLGTSLARPVIAKKQVEIAQSEGAKYVAHGATGKGNDQVRFELCAQALDAQLKTIAPWRDAEFIEKFKGRADLIQYAKEQNIPIDATPKAPYSVDENLYHTSYEAGMLEDPMTAPMVEMFKMTVDPKDAPDAAEQIQVRFEKGIPVGVTNLTAKTPELTGALDLFLELNRLAGKHGIGRIDIVENRFVGIKSRGCYETPGGTILRHAHLDLEGLCMDREVMKVRDSLSAKFAEYCYNGFWFAPEMDFVRNAVDFSQQNITGFVNLELYKGNVTVIGRHSDEALYSADLASMDQEGGGANFDYNPADAQGFIRINATRLKAW 413          
BLAST of EWM28271.1 vs. NCBI_GenBank
Match: gi|635372168|emb|CCI39776.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0
Identity = 288/410 (70.24%), Postives = 337/410 (82.20%), Query Frame = 0
Query:    6 KCVLAYSGGLDTSVILVWLIEKGFDVICYCANVGQLKEDFDKVREKALKCGASKVYIEDLREEFVKDYVFWAVKANAQYEGRYLLGTSLARPVIAKRQVEIAQKEGAKWLSHGATGKGNDQVRFELCAQALDAAIQTLAPWRETEFIERFKGRQDLLDYAAAHNIQVEATKKASYSVDENLYHTSYESGMLEDPMVPPLKEMFKMTVDPEDAPDKAEKVRIDFEEGVPVKVTNHDDGTVK--TEPLELFLYLNELAGKHGVGRIDIVENRFVGIKSRGVYETPGGQILRVAHMDLEGLCVDREVLRLKEGHQLEFSRLCYNGFWFAPEMELTKASIDFTQRRVAGGVELSLYKGNVTVLGRESPYSLYSADLASMEIEGGGAAFDYVPMDAQGFIRINAVRLRAYNALER 413
            K VLAYSGGLDTSVIL WL  KGF+VICYCANVGQ  ED+ KV+EKAL  GA+KVYIEDLR EFV+D++F AVKANA YE RYLLGTSLARPVIAK+QVEIAQKEGA +++HGATGKGNDQVRFELCAQALDA +QT+APWR+ EFI +FKGR DLL YAA   I V+AT KASYS+DENLYHTSYE+GMLEDP+  P  EMFKMTVDP+ APD+AEK++I F  GVPV + N    +    T PLELFL LNE   KHG+GRIDI+ENRFVGIKSRGVYETPGG ILRVAH+DLEGLC+DREVL++++    +F+   YNGFWFAPEM+  + +ID++QR V G V L LYKGNVTV+GR S  +LY ADLASM+ EGGG+ FDY P D+QGFIRINA RL+A+N L++
Sbjct:   10 KVVLAYSGGLDTSVILKWLANKGFEVICYCANVGQHGEDYTKVKEKALALGATKVYIEDLRREFVEDFIFEAVKANAIYESRYLLGTSLARPVIAKKQVEIAQKEGALFVAHGATGKGNDQVRFELCAQALDAKLQTIAPWRDAEFINQFKGRADLLKYAAEQKIPVDATPKASYSMDENLYHTSYEAGMLEDPLTAPTSEMFKMTVDPKVAPDQAEKIQITFSNGVPVSLKNLSTPSTPELTTPLELFLSLNEYGRKHGIGRIDIIENRFVGIKSRGVYETPGGTILRVAHLDLEGLCLDREVLKVRDSLSAKFAEFAYNGFWFAPEMDFVRHAIDYSQRNVTGYVNLELYKGNVTVIGRHSDLALYIADLASMDQEGGGSHFDYNPSDSQGFIRINATRLKAWNHLQK 419          
The following BLAST results are available for this feature:
BLAST of EWM28271.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553182191|ref|XP_005853695.1|0.000e+0100.00argininosuccinate synthetase [Nannochloropsis gadi... [more]
gi|299470329|emb|CBN78379.1|0.000e+073.65argininosuccinate synthetase [Ectocarpus siliculos... [more]
gi|813123544|ref|XP_012196551.1|0.000e+071.22argininosuccinate synthase [Saprolegnia parasitica... [more]
gi|669148152|ref|XP_008609638.1|0.000e+071.46argininosuccinate synthase [Saprolegnia diclina VS... [more]
gi|970649774|gb|KUF88962.1|0.000e+071.04voltage-gated potassium channel subunit beta [Phyt... [more]
gi|325181184|emb|CCA15598.1|0.000e+069.25unnamed protein product [Albugo laibachii Nc14] >g... [more]
gi|301114519|ref|XP_002999029.1|0.000e+071.04argininosuccinate synthase [Phytophthora infestans... [more]
gi|1173941410|gb|OQR90580.1|0.000e+069.44argininosuccinate synthase [Achlya hypogyna][more]
gi|675166093|ref|XP_008891931.1|0.000e+071.04argininosuccinate synthase [Phytophthora parasitic... [more]
gi|635372168|emb|CCI39776.1|0.000e+070.24unnamed protein product [Albugo candida][more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2383rna2383Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications