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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100329g6.5238.mrna |
| Orig protein id | gnl|cribi|Naga_100329g6.5238 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:96391..97731 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2314 ID=rna2314|Name=rna2314|organism=Nannochloropsis gaditana|type=mRNA|length=4271bp
GCCTGTGCCCTTGTATCCCCTCATCAGAATCACTCACTCCCTCTGAGAGA
CCTGCATTCACTTTGTACCGCGCATTTTAGTTCCGCCGAGCTGCGCGCTG
TTTCCTTCCTCGACACCCTTCTTTTATGAGCTGACCTTTTCCTTTACAAT
GTCCTGGCACCCTTTTGTGGGTTTGTTGCCTCTTTTCCCACGTTTGCCAC
CGTGTCAGGGCAATAATCGCGAGTTAGACGCCTCCACGAACGTCGAATGG
AAAAAACCCACCGAACGCCTCAGTAATGAGCAGCGACGATCCTCCTCAAG
CTCCTCGTCCCACCTGTATCTCTTGTCTAAATAGCAAAGTAAAATGTGAC
AGAGAAAGTCCGGTACGTTCTACCTTTCTCCGTCCTGAAGGGCCACCTTC
TTAAGTACTAATACCCCCCGCTGTCTGTTTCGCTCAATACTTACCTTGAC
CCGACGTCTTGGCGCGCACCTTCTTAAAACTGCGCTATTCGTTCCTGGCC
ATCATTGCAGTGCTCGAGATGCGTCCGTCTTAACCTGTCATGTGTGCCAA
ACCCCCGACCTCCCGGCCGCCCGGCCCGGCGTCCTTATGGGGGGCCTGCG
GATCGCTTTTCTGACTCGATGAGGCTTCACAGTGGGACCAATCTTCGCCC
TAAACTTCCCCTTTCTTCCCATCCGTACGCCACTGTGTCCAGCTGGAGCG
CGCGGGATGGTGACGGCAACGAAGGGGAGAGCGAGGCGCCCCGGGCGCAG
CTAAGCGATGAGGAATTCCGCAGTCGGTTCGTCCATGCGAATCACCACCA
CTTCCGACGCACTTTGGACGAGCACCACGCCTCCGTCCTCGCCTCGCTCG
CGACCGTGGGGCGCAAGGCAGGACCCAAGACAAAGGAGGATGGCCGCGCA
GGGGACGACGCCCTGGAGAGCATGGGTGGGAAACAACGTGTCACCCGCCT
TCCCCCTTCCACCATGTCCTCCTCTCCCACCACAACCTCCTCCATCTTCT
CCGCCTCCACTTTGGGCTCTGCTTCCACGAATTTAACCTCGCACGCCACC
CTTGCCAGTCGCGAGCGAAAGCGGGCCCGGGAGGAGGGCGGGAGGGAGGG
CGGGAGGGAGGGCGGGAGAGAGGACGTGGACTTGCCGTCGGAGTATGACC
TCGAACCGTCCTACATCCTGGCCTTTGTCACCATGCTTGCGAATCGAAAG
GTGCACGTGGAGCGTGCGAAGGTCATTGTGGAAGGCTGGTTGCGGTGGAA
CAAGCGTCTAGGACGTGATGCCTCACAGGGACTGGCCGACGTCATCCTCT
TCGTGCTGGGACTGAACGCGGGAGGCAGGGGTAGGGACGGCGGGGAAGGA
GGGCAGCGGGGGGGAGATAATGATCATCCAAGAAGGCCGACAACGCACGA
GCCTGTCAAGGAGGAAAAAGGGCGCGAAGCTCAGGGAGCCCGGGGGCCAC
TCCCACAGGGAAAGCCCCCGAACCCGTATCCACAAGCGCCTGCCGACCAG
TCCTTGCACCACCTGTATCCCCCGTACCACCCACACTCTACTCCCTCGCA
CGCCCGTCCTGTGGAAGCAGCGTCCGGCGTCTTATCCTCCGGGCAGGGAC
AGGGCTTTCCACCTCTGCTTCCCAGTGCCCCGGGCGCCTCGACTTCTACG
GCCCACCAAGGAGGGCGCGACCCTGCCTCGCTCGCGGCGTCCCATTCCAA
ATTTCCCCTGCCGTTCCCGTCTGCCTCCGTGTCGGTCTCCGGGTCGGCGG
CGATGGAAAGAGGGGTCACGGGGCTGGGGTCGGGGCAGGGAGATGCTTTG
AACAAGCAGTCGAGACCTGGGGTAGAGGAGACTCTTCAAAGCCACCAAAA
ATCCCCCAGCCTCTCTTTTCTGTTGGCGGCCGCAGAACGGGAGCTGACCA
AAACCGCCGTGTCGCGGATGGTGTCCGACTCCCGGTCTTCGTCCCCCTCC
TCTGCCACCACCTTCTCCACCTCGCCGGCCTTCCCCAAGGAGGAGCAAGG
GAAGGAAGGGGGGGGGATGGAGGAAAGGCAGCGGGGCCGGATGGAGGCAG
AGAGAGGTGGGGAGAAGGGAGAGGGCGCACCAGCGACGCTGGAATCTGGG
GCGCCCTCGTCCTCGTTGTATGCGGTCCCACCCCTGGCGGAGAAGGAGTC
GAGGACGTTAGCCTTTGCCCCGCGCCCTCCTTTGCCTCCTTCCAAGACAG
AGCTCCACGCCGCGCTTGGCTTCCTCCCGCCGGAATTTCGGCAATTTCTA
GTCCAAGATGGATTGGAAGGTGACGCAGAGGGGCCCAAGTCGGTCAGACG
CGTCAAGGGGAAAGAGACGAATGAGGTGATGGCGAGTGCCGCGGCGGTGG
CGGCTTTCATCTGGGAAGAAGGTGGCGGGGCAGTCCCCTTGGTGGTTTGC
AATGAACGATTTTCCACCCTGCTTATTGATAAGAAGGCAATCGAGGTCTC
CCTCCTGGAAGAGGCTCTGTCACCCCAGCATATTCTGGCCCAAATCATCA
CACCTGAGTCCCGCCATCTTTTCTACGACGGACTGGTGGAGGCCTCGTTT
GCCGCGGCCAGTCCGTTTTCGATCAAAACCACGAGCAGGGTCCTCAAGGT
GCTGGTGCAAAACAGCGTTGAAGTGAAGGTGGTGGCCTCCTTCGCGGTGG
CTTGTACGCCCCCCCCCCACGCCCTCCACGCCTATGCCTTCCGCTTTATC
CCCTTACCCCGCCAGTCCCGACCCCTCGATGACTCGGGTGAACCGCTGGC
CTCAACGCGTCGCCCTGGGGAAAGCAAAGCACCCTTGTCGCAGTATCAGC
CCGGGCAGGCGGACCGCGAGCCGGCGCCAGACGCCCCATTTCGACCAAGC
ATTCCTTCCCACCCATCCACCATCTCCGAGCCCTCCCGTTATGCGTACGC
CGACCAAGCCCATCTGTCGCGGCTTTCTTCCTTCCCTTCCCCTCAGGAGG
GAGGGTACACGCGCATGTCACGATACCCGGATGGACCAGCTTCCCGGGGG
CTCCTTGATCAGCTCCCTGAAATTTCCTCTACTCTTCCTCACCCCCACCC
CTCCTCCGGCCCTCCCACCTTACCCAGTGTTTTCAACGAGGAGACGTATC
CATCCCACCCGGATAACCGTCCAGGGTACCGCTCGAACAGCTTCCATTGA
TTCGCGTAAAAACCGGGGCCTGTACTCAGGATTGCGTAGCGGTGGGGTAG
AACTCTATCGAGTCTCCTTGCGTCCGGGAGTACGGGAGGTTGGGTAGGAT
TGGAAGGTGGGCAAAGACAGGATCGCCGCAATGGTTTGACGGCTGTGTCG
AGGAGAGACGCGCTTGCGGGGGACGGAGAGGAAGAGGGGAAAGATTGTGG
GACAAGAGCACCGGTTGCATTTTATGCATGTAGGCGAAGGCTTAGCGCTT
TGAGTCGAGGTCGATAAGGCCAGATTGGGTCTACTTGCAATCATGAGGCT
TGCTGACGATCCAGTGCATGCCGCAGGCGTGCAAAGATTTCATCTCGATG
GGCGTGAGAGGGTGACAGGTCTTAAGGGCCCCGGCGTTAGGGCAGCCGCG
TCAAACGCCTTCCCGGCCTCCTCTTCCTTGGAGAGGAAAGGGATGCTATT
GTAAAGGCAAAACCGAAGAGTTTTAAAGCATCAGGACGAGAACTTTGTCA
TTCCGAAGGAGGGTGGAAGGGATGGTGCCAACCTAATGTGTAGAACGAAA
TCAAGGTACGTCAGTGACCAAAAAGTACTTGTGTACTGTGGGACTGGTGG
GTGGAGGCAGGTGCGAATGAGATAATCACTGTAAGAGGGAGACAGCCGAG
GAAAGGGAGAGGAAGAGATTCGGGGAGAAAGAAGGATGTGCAACGGGAGG
TTGTGTGGAAGACAGACAGTGGGGAAAAAACCAGGAAGGAGATGGACAAG
GCGAGAAGACATGGGAAGTACCGGAATGCTCCGCCATTGGAAGGTATTTT
GTGCTGAAAAAGTAAAAAAGCAGACTTGCAGCTTTGGCGAACAGGTCAAG
CGTAAGTTCGATTTTGCAAACAAAGGCGTGGTAAGCTCGGTGCGCCAATT
TCCTGTCTCGCAGTTTTTTTCCAGGCATCACTAAACCGCTGCCTTCCTGT
GGGATTCGAGTGCGCAGGATAAGGGGGAAAAATGTCTTCCCCGCATCGTG
GGTTCTCTTCCGCCATCATTTGTGCGTTCCTTGATCCCGCCCGATTCCCG
GCCTGACTTTCACTCGAGGGAAAGACGACGCCCGTTTCCCCCCGTCCCAC
GCCAGCCGTGGCGTCCCTTCC back to topprotein sequence of rna2314 >rna2314-protein ID=rna2314-protein|Name=rna2314|organism=Nannochloropsis gaditana|type=polypeptide|length=148bp
MSSSPCGPWPFTKKRAGSTFLISFPLMPCPPFPPSHPPSLLPWQLRHIGR
RLHGGRGGGDDHENRREHQAEQGLLATDLDRPSPAQSHPDRGNGRHRELP
NCPFGVFDGEERGSACPSLGGAGGRCGGGGGGGGREGGRGSGGGSSTS back to topmRNA from alignment at CM002459.1:96391..97731- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2314 ID=rna2314|Name=rna2314|organism=Nannochloropsis gaditana|type=mRNA|length=1341bp|location=Sequence derived from alignment at CM002459.1:96391..97731- (Nannochloropsis gaditana)
GGGAGAAAGAGGGGGAAAGGCCGCAGACGCCATTACTGACTTCTGGAGCA
TGTGACAGGGAGCTTTATGACGAGATTGGCGAGCGTCTGACCAAGGAAGA
CTGGGAGCGGTAAGCCAATCCTCCCTCCCTCCCTCCTTCCTTCCCTCCTT
CCTTCCCTGCTTCCCTCCTTCCTTCCCTCCCTCCCTCCAACCATGTCTTC
TTCACCATGCGGGCCATGGCCATTCACAAAGAAAAGAGCAGGCTCAACCT
TTCTAATTTCCTTCCCGCTCATGCCTTGCCCCCCCTTCCCCCCCTCCCAC
CCTCCTTCCCTCCTGCCCTGGCAGCTACGACATATTGGAAGGCGACTTCA
TGGGGGACGAGGAGGCGGTGATGACCATGAAAATCGAAGAGAACACCAAG
CGGAACAAGGACTACTTGCGACAGACCTTGATCGCCCCTCCCCGGCGCAA
AGCCACCCTGATCGTGGAAACGGAAGACATCGAGAGCTACCGAACTGCCC
TTTTGGAGTCTTCGACGGGGAGGAAAGGGGCTCTGCCTGCCCCAGCCTCG
GAGGCGCAGGAGGACGGTGCGGGGGTGGTGGAGGTGGAGGAGGGCGGGAA
GGAGGAAGAGGTAGTGGCGGCGGTAGCAGCACCAGCTAAGAGGGGAAGGA
AGCGCAAGGCAACTGCGGGGGAGGGCGAGGAGGATTGAGGAAAAGGAGGA
AGGTTGGGGGGGGGAGCACGACACTGTAAAATTTGAAAAAAAAAAGGGTG
GGGAAAAGGGAGGGGAACGCGAAGGGGAGAACGAGGGAAGATGTGAGGCT
GTACAGGGTCATCCAGCGCGCAAACAGGACCATTGGATCGACGGGCGGGA
GGACGGGCGGGAGGCATGGCGAAAAAGAGAGGGGGGGCGGGGGGAGGAGC
ACAAGAAGGTATACGAGGCGTGATATTTGAGTAGAGGAAGGAGGACAGAG
CGTGGATCCGAGGAAAAGGATAGAGAGGTAACGATGACGCCCTAAACCAT
GTGGAAAGGGTGCTCGCCTGTGAGGGTTCCCCTGCGTTGAATCGTGCGGT
GGAGAAGGAGAAGGGATGCCAGCACATCGTGGTGGAGGGGTGGGAGGAAA
TAATCCACGTGGGGGGGTAGATCGAGCGTGGGTTCGGCGAGAGAGCTCAC
TGGCCGGTCTCAAGCTTGTCCTCTCCGGGGAGGGGGGTCATGCGAGGTTA
GAAGGGTTGAGCGCATAAATTGATTTGAAGAAGGAAGCAATTGAAAAGAG
ATGAGGATCGAATGCCTAACCGTACACATGTCCACCGGCCCTTTTTTTGC
TTCCGTGATGCTGCGACGCGTGTTCGGGACAATCCAGTTGA back to topCoding sequence (CDS) from alignment at CM002459.1:96391..97731- >rna2314 ID=rna2314|Name=rna2314|organism=Nannochloropsis gaditana|type=CDS|length=447bp|location=Sequence derived from alignment at CM002459.1:96391..97731- (Nannochloropsis gaditana)
ATGTCTTCTTCACCATGCGGGCCATGGCCATTCACAAAGAAAAGAGCAGG
CTCAACCTTTCTAATTTCCTTCCCGCTCATGCCTTGCCCCCCCTTCCCCC
CCTCCCACCCTCCTTCCCTCCTGCCCTGGCAGCTACGACATATTGGAAGG
CGACTTCATGGGGGACGAGGAGGCGGTGATGACCATGAAAATCGAAGAGA
ACACCAAGCGGAACAAGGACTACTTGCGACAGACCTTGATCGCCCCTCCC
CGGCGCAAAGCCACCCTGATCGTGGAAACGGAAGACATCGAGAGCTACCG
AACTGCCCTTTTGGAGTCTTCGACGGGGAGGAAAGGGGCTCTGCCTGCCC
CAGCCTCGGAGGCGCAGGAGGACGGTGCGGGGGTGGTGGAGGTGGAGGAG
GGCGGGAAGGAGGAAGAGGTAGTGGCGGCGGTAGCAGCACCAGCTAA back to top
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