|
|
Properties
| Property Name | Value |
|---|
| Product | n -(beta-n-acetylglucosaminyl)-l-asparaginase |
| Orig transcript id | gnl|cribi|Naga_100616g4.10677.mrna |
| Orig protein id | gnl|cribi|Naga_100616g4.10677 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:73804..76155 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2305 ID=rna2305|Name=rna2305|organism=Nannochloropsis gaditana|type=mRNA|length=288bp
AGGGGAGGCGACCAAGGTTGGATGAGGCATCTACCATCACACGTTCGTGA
GCGTTTGGAGTCGCAGCATCCGCAATTTGCACCGTACATGCTCCCTGAAG
AGAAGGCGGCGCGTCGAGAGGCGGAGAAAAAAAATCGACAGCTCTTCGAT
GAGAATCCTGGTGTGCTCGACATTCCGCTGCGAGAAGGCGAGGCCCTCCA
TGCTGCCACCCAGGTCGGTAATCCCTCCCTCTCCATTCGTCCCTCCTCAT
CCCTGTCGCTTTTCCTGCCCTTCTTGCCCCCTCTTTGA back to topprotein sequence of rna2305 >rna2305-protein ID=rna2305-protein|Name=rna2305|organism=Nannochloropsis gaditana|type=polypeptide|length=432bp
MLPVCSLRLSYSQKFLFFVVVPPFVPSVTGIRRLTAPCYMQHIILVLFFC
FVSFGHPFSHNLISTGHSDLSDMTAGMPHPKGAVVAGTWLFGRLAVEKAA
EVLLSSSTSPTAPPSIDHPSETNLATSIALDAVEAGINVVELDNQDQYYV
GYGGFPNAEGEMELDAAIMCGSRKTYGGVAALQGVSRAISVARRVMEESV
HSLLVGRGASTFARSQGFEWDEVLSPAAREEWLIWKGNEGKEGPQVDGRK
EESAGVPAPPREGDAVAPHDTVGLLVLDAHGNLAAGTSTSGWCFKHPGRV
GDSPIVGSGLYADSAVGGAVATGDGEEIMRVCLSFLVVEKMREGLGPALA
CQAGIQRLKVLIREGGGEGERQGMHESLTVAVMALDKEGRVGAASTLGEH
NRHRGRPGFPFVVWKEGLGKAWVEEADDTGTA back to topmRNA from alignment at CM002459.1:73804..76155+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2305 ID=rna2305|Name=rna2305|organism=Nannochloropsis gaditana|type=mRNA|length=2352bp|location=Sequence derived from alignment at CM002459.1:73804..76155+ (Nannochloropsis gaditana)
ACACATGTCCAGCTATCGCGTTTATGGGCACATCTATAGAGCTGTGTAAT
TTCTAGCTGATAAAATGTAGGTAGAGTAAACATCATGCTGTAGTGAAGGT
GGCGTGGGACCAAGTTATCCAAGGTTTACAGGTATAACGCGGCCTCTCGA
TTAACCTCCTCTGCCGTGCTTGCTTGTCACTTCTGCTTTTGAAAAGGAAA
CAGAAAAGACTTCGATGCTCCCCGTGTGTAGTCTTCGCCTGTCATACTCT
CAAAaattcctttttttcgttgTCGTTCCACCATTTGTGCCTTCAGTCAC
AGGCATAAGGCGGTTGACGGCGCCCTGCTACATGCAGCATATCATCCTCG
TACTTTTTTTCTGTTTTGTCAGCTTCGGGCATCCGTTCAGTCACAATCTT
ATTTCAACAGGTCACTCAGATCTATCTGACATGACTGCTGGGATGCCTCA
TCCCAAAGGCGCGGTTGTCGCCGGGACCTGGCTATTTGGAAGGCTAGCGG
TCGAGAAGGCAGCTGAAGTgctcttgtcttcctccacctcccctacAGCA
CCTCCTTCTATTGATCATCCTTCCGAGACTAATCTTGCCACGTCTATAGC
CCTGGATGCCGTTGAAGCCGGTATAAATGTCGTGGAGTTGGATAATCAAG
GTAAGAAATCAGGATCATTACCGTAGTACGAGCACGCATCGATACAATTT
ACTCCAAGCTTTGACATTCCTGGATGCTCATAGATCAGTACTACGTGGGA
TACGGTGGTTTCCCGAacgcggaaggagaaatggaatTGGATGCCGCCAT
CATGTGTGGGAGTCGCAAGACCTACGGCGGAGTTGCCGCGCTTCAGGTAC
GAGTGATGCAATCAAAAATGTTGGAGCCAGATGGCACCACTGCACCGAAG
AGAAGAGATACATTGTGTAAGGAGCGCTCATACGATGTGTGTTTAGATGA
ACCACATACAGGAAAAGTTTGAGAAGTCCGAGAAACATGAGATAGGTCTT
TCATCGTCGTGTTGGGACTGTATAGGAGCGAAATacccaaggaggaggcg
gcacgAGAAGCCAGACACTGAATTTATGGATACGTATTCCTCGCTCCAGG
GGGTCCCCACCAAGTGTTTGGACAGCCCTGGAGATACGGCGTTGTTATGT
TCCACGAACGGATCTCACGCTCACCCCTCTCACGTCGTGAGGAGTAAGGA
GTAGGGCATTAATGCTCCCACGCCCGACAAAGGGGTCGGATATACCACCT
CTCACGTCACCATTCTCACGCGTGCACTTGCCACACGCACAGGGAGTAAG
CCGAGCAATATCCGTGGCCCGGCgtgtgatggaggagagcgtTCACAGTT
TGTTGGTCGGGCGGGGCGCGAGTACATTCGCCAGGAGCCAGGGCTTTGAG
TGGGACGAGGTTTTGTCCCCCGCCGCCAGAGAAGAGTGGCTTATCTggaa
aggaaacgaaggaaaggagggcccaCAGGTGGACGGccgcaaggaggaaa
gcgccggGGTCCCGGCTCCCCCAAGAGAGGGGGACGCAGTGGCTCCACAC
GACACCGTCGGtcttcttgtcctcgatGCACATGGAAACTTGGCCGCGGG
CACTTCCACGTCTGGGTGGTGCTTTAAGCATCCAGGTACCTTCGCAaagc
cctcttttccctcgctcctcttttcctgcttttctATCTtggtccctctc
tccctccttccctcctcccccccttcccatcctccctcccttccttcctc
cttccttcctttcctccttcttccctccctgccacccCTTAGGGCGTGTG
GGCGACTCGCCCATCGTTGGCAGTGGGCTGTATGCCGACAGTGCCGTAGG
GGGCGCCGTCGCAACAGGTGACGGCGAAGAGATTATGCGCGTctgcctct
ctttcttggtGGTGGAAAAGATGAGGGAAGGTCTGGGCCCGGCCTTGGCC
TGTCAAGCGGGCATCCAACGCTTGAAGGTCCTgatcagggagggaggggg
ggagggcgagagacAGGGCATGCACGAAAGCCTGACGGTGGCCGTCATGG
CCCTggacaaagaggggagggtgggcgcTGCGTCCACCTTGGGGGAGCAC
AACCGGCACCGGGGGCGTCCAGGTTTCCCTTTTGTTgtgtggaaagaggg
gcttGGAAAGGcctgggtggaggaagcggacgacACGGGAACGGCGTGAG
GCCAATTACGTAAtgtggaggtgggagagggggggctgTGGTGGAAGCTG
ACTTTGTTCTGAGCGTACGAGATCACTGCGTGCGTGGAACTATTGAGCCC
ACTGAAAGAAAGATGTGTCGGATAAAAAATAATGGTTTGCGTCGTGGCCT
GG back to topCoding sequence (CDS) from alignment at CM002459.1:73804..76155+ >rna2305 ID=rna2305|Name=rna2305|organism=Nannochloropsis gaditana|type=CDS|length=5196bp|location=Sequence derived from alignment at CM002459.1:73804..76155+ (Nannochloropsis gaditana)
ATGCTCCCCGTGTGTAGTCTTCGCCTGTCATACTCTCAAAaattcctttt
tttcgttgTCGTTCCACCATTTGTGCCTTCAGTCACAGGCATAAGGCGGT
TGACGGCGCCCTGCTACATGCAGCATATCATCCTCGTACTTTTTTTCTGT
TTTGTCAGCTTCGGGCATCCGTTCAGTCACAATCTTATTTCAACAGGTCA
CTCAGATCTATCTGACATGACTGCTGGGATGCCTCATCCCAAAGGCGCGG
TTGTCGCCGGGACCTGGCTATTTGGAAGGCTAGCGGTCGAGAAGGCAGCT
GAAGTgctcttgtcttcctccacctcccctacAGCACCTCCTTCTATTGA
TCATCCTTCCGAGACTAATCTTGCCACGTCTATAGCCCTGGATGCCGTTG
AAGCCGGTATAAATGTCGTGGAGTTGGATAATCAAGATCAGTACTACGTG
GGATACGGTGGTTTCCCGAacgcggaaggagaaatggaatTGGATGCCGC
CATCATGTGTGGGAGTCGCAAGACCTACGGCGGAGTTGCCGCGCTTCAGG
GAGTAAGCCGAGCAATATCCGTGGCCCGGCgtgtgatggaggagagcgtT
CACAGTTTGTTGGTCGGGCGGGGCGCGAGTACATTCGCCAGGAGCCAGGG
CTTTGAGTGGGACGAGGTTTTGTCCCCCGCCGCCAGAGAAGAGTGGCTTA
TCTggaaaggaaacgaaggaaaggagggcccaCAGGTGGACGGccgcaag
gaggaaagcgccggGGTCCCGGCTCCCCCAAGAGAGGGGGACGCAGTGGC
TCCACACGACACCGTCGGtcttcttgtcctcgatGCACATGGAAACTTGG
CCGCGGGCACTTCCACGTCTGGGTGGTGCTTTAAGCATCCAGGGCGTGTG
GGCGACTCGCCCATCGTTGGCAGTGGGCTGTATGCCGACAGTGCCGTAGG
GGGCGCCGTCGCAACAGGTGACGGCGAAGAGATTATGCGCGTctgcctct
ctttcttggtGGTGGAAAAGATGAGGGAAGGTCTGGGCCCGGCCTTGGCC
TGTCAAGCGGGCATCCAACGCTTGAAGGTCCTgatcagggagggaggggg
ggagggcgagagacAGGGCATGCACGAAAGCCTGACGGTGGCCGTCATGG
CCCTggacaaagaggggagggtgggcgcTGCGTCCACCTTGGGGGAGCAC
AACCGGCACCGGGGGCGTCCAGGTTTCCCTTTTGTTgtgtggaaagaggg
gcttGGAAAGGcctgggtggaggaagcggacgacACGGGAACGGCGTGAA
TGCTCCCCGTGTGTAGTCTTCGCCTGTCATACTCTCAAAaattccttttt
ttcgttgTCGTTCCACCATTTGTGCCTTCAGTCACAGGCATAAGGCGGTT
GACGGCGCCCTGCTACATGCAGCATATCATCCTCGTACTTTTTTTCTGTT
TTGTCAGCTTCGGGCATCCGTTCAGTCACAATCTTATTTCAACAGGTCAC
TCAGATCTATCTGACATGACTGCTGGGATGCCTCATCCCAAAGGCGCGGT
TGTCGCCGGGACCTGGCTATTTGGAAGGCTAGCGGTCGAGAAGGCAGCTG
AAGTgctcttgtcttcctccacctcccctacAGCACCTCCTTCTATTGAT
CATCCTTCCGAGACTAATCTTGCCACGTCTATAGCCCTGGATGCCGTTGA
AGCCGGTATAAATGTCGTGGAGTTGGATAATCAAGATCAGTACTACGTGG
GATACGGTGGTTTCCCGAacgcggaaggagaaatggaatTGGATGCCGCC
ATCATGTGTGGGAGTCGCAAGACCTACGGCGGAGTTGCCGCGCTTCAGGG
AGTAAGCCGAGCAATATCCGTGGCCCGGCgtgtgatggaggagagcgtTC
ACAGTTTGTTGGTCGGGCGGGGCGCGAGTACATTCGCCAGGAGCCAGGGC
TTTGAGTGGGACGAGGTTTTGTCCCCCGCCGCCAGAGAAGAGTGGCTTAT
CTggaaaggaaacgaaggaaaggagggcccaCAGGTGGACGGccgcaagg
aggaaagcgccggGGTCCCGGCTCCCCCAAGAGAGGGGGACGCAGTGGCT
CCACACGACACCGTCGGtcttcttgtcctcgatGCACATGGAAACTTGGC
CGCGGGCACTTCCACGTCTGGGTGGTGCTTTAAGCATCCAGGGCGTGTGG
GCGACTCGCCCATCGTTGGCAGTGGGCTGTATGCCGACAGTGCCGTAGGG
GGCGCCGTCGCAACAGGTGACGGCGAAGAGATTATGCGCGTctgcctctc
tttcttggtGGTGGAAAAGATGAGGGAAGGTCTGGGCCCGGCCTTGGCCT
GTCAAGCGGGCATCCAACGCTTGAAGGTCCTgatcagggagggagggggg
gagggcgagagacAGGGCATGCACGAAAGCCTGACGGTGGCCGTCATGGC
CCTggacaaagaggggagggtgggcgcTGCGTCCACCTTGGGGGAGCACA
ACCGGCACCGGGGGCGTCCAGGTTTCCCTTTTGTTgtgtggaaagagggg
cttGGAAAGGcctgggtggaggaagcggacgacACGGGAACGGCGTGAAT
GCTCCCCGTGTGTAGTCTTCGCCTGTCATACTCTCAAAaattcctttttt
tcgttgTCGTTCCACCATTTGTGCCTTCAGTCACAGGCATAAGGCGGTTG
ACGGCGCCCTGCTACATGCAGCATATCATCCTCGTACTTTTTTTCTGTTT
TGTCAGCTTCGGGCATCCGTTCAGTCACAATCTTATTTCAACAGGTCACT
CAGATCTATCTGACATGACTGCTGGGATGCCTCATCCCAAAGGCGCGGTT
GTCGCCGGGACCTGGCTATTTGGAAGGCTAGCGGTCGAGAAGGCAGCTGA
AGTgctcttgtcttcctccacctcccctacAGCACCTCCTTCTATTGATC
ATCCTTCCGAGACTAATCTTGCCACGTCTATAGCCCTGGATGCCGTTGAA
GCCGGTATAAATGTCGTGGAGTTGGATAATCAAGATCAGTACTACGTGGG
ATACGGTGGTTTCCCGAacgcggaaggagaaatggaatTGGATGCCGCCA
TCATGTGTGGGAGTCGCAAGACCTACGGCGGAGTTGCCGCGCTTCAGGGA
GTAAGCCGAGCAATATCCGTGGCCCGGCgtgtgatggaggagagcgtTCA
CAGTTTGTTGGTCGGGCGGGGCGCGAGTACATTCGCCAGGAGCCAGGGCT
TTGAGTGGGACGAGGTTTTGTCCCCCGCCGCCAGAGAAGAGTGGCTTATC
TggaaaggaaacgaaggaaaggagggcccaCAGGTGGACGGccgcaagga
ggaaagcgccggGGTCCCGGCTCCCCCAAGAGAGGGGGACGCAGTGGCTC
CACACGACACCGTCGGtcttcttgtcctcgatGCACATGGAAACTTGGCC
GCGGGCACTTCCACGTCTGGGTGGTGCTTTAAGCATCCAGGGCGTGTGGG
CGACTCGCCCATCGTTGGCAGTGGGCTGTATGCCGACAGTGCCGTAGGGG
GCGCCGTCGCAACAGGTGACGGCGAAGAGATTATGCGCGTctgcctctct
ttcttggtGGTGGAAAAGATGAGGGAAGGTCTGGGCCCGGCCTTGGCCTG
TCAAGCGGGCATCCAACGCTTGAAGGTCCTgatcagggagggaggggggg
agggcgagagacAGGGCATGCACGAAAGCCTGACGGTGGCCGTCATGGCC
CTggacaaagaggggagggtgggcgcTGCGTCCACCTTGGGGGAGCACAA
CCGGCACCGGGGGCGTCCAGGTTTCCCTTTTGTTgtgtggaaagaggggc
ttGGAAAGGcctgggtggaggaagcggacgacACGGGAACGGCGTGAATG
CTCCCCGTGTGTAGTCTTCGCCTGTCATACTCTCAAAaattccttttttt
cgttgTCGTTCCACCATTTGTGCCTTCAGTCACAGGCATAAGGCGGTTGA
CGGCGCCCTGCTACATGCAGCATATCATCCTCGTACTTTTTTTCTGTTTT
GTCAGCTTCGGGCATCCGTTCAGTCACAATCTTATTTCAACAGGTCACTC
AGATCTATCTGACATGACTGCTGGGATGCCTCATCCCAAAGGCGCGGTTG
TCGCCGGGACCTGGCTATTTGGAAGGCTAGCGGTCGAGAAGGCAGCTGAA
GTgctcttgtcttcctccacctcccctacAGCACCTCCTTCTATTGATCA
TCCTTCCGAGACTAATCTTGCCACGTCTATAGCCCTGGATGCCGTTGAAG
CCGGTATAAATGTCGTGGAGTTGGATAATCAAGATCAGTACTACGTGGGA
TACGGTGGTTTCCCGAacgcggaaggagaaatggaatTGGATGCCGCCAT
CATGTGTGGGAGTCGCAAGACCTACGGCGGAGTTGCCGCGCTTCAGGGAG
TAAGCCGAGCAATATCCGTGGCCCGGCgtgtgatggaggagagcgtTCAC
AGTTTGTTGGTCGGGCGGGGCGCGAGTACATTCGCCAGGAGCCAGGGCTT
TGAGTGGGACGAGGTTTTGTCCCCCGCCGCCAGAGAAGAGTGGCTTATCT
ggaaaggaaacgaaggaaaggagggcccaCAGGTGGACGGccgcaaggag
gaaagcgccggGGTCCCGGCTCCCCCAAGAGAGGGGGACGCAGTGGCTCC
ACACGACACCGTCGGtcttcttgtcctcgatGCACATGGAAACTTGGCCG
CGGGCACTTCCACGTCTGGGTGGTGCTTTAAGCATCCAGGGCGTGTGGGC
GACTCGCCCATCGTTGGCAGTGGGCTGTATGCCGACAGTGCCGTAGGGGG
CGCCGTCGCAACAGGTGACGGCGAAGAGATTATGCGCGTctgcctctctt
tcttggtGGTGGAAAAGATGAGGGAAGGTCTGGGCCCGGCCTTGGCCTGT
CAAGCGGGCATCCAACGCTTGAAGGTCCTgatcagggagggaggggggga
gggcgagagacAGGGCATGCACGAAAGCCTGACGGTGGCCGTCATGGCCC
TggacaaagaggggagggtgggcgcTGCGTCCACCTTGGGGGAGCACAAC
CGGCACCGGGGGCGTCCAGGTTTCCCTTTTGTTgtgtggaaagaggggct
tGGAAAGGcctgggtggaggaagcggacgacACGGGAACGGCGTGA back to top
|