EWM28465.1, cds2202 (CDS) Nannochloropsis gaditana

Overview
NameEWM28465.1
Unique Namecds2202
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1167525..1168712 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28465.1
Producttubulin--tyrosine ligase-like protein 12
Orig transcript idgnl|cribi|Naga_100190g9.3116.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1167525..1168712 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR027749TTLL12
IPR004344TTL/TTLL_fam
Homology
BLAST of EWM28465.1 vs. NCBI_GenBank
Match: gi|585110875|gb|EWM28465.1| (tubulin--tyrosine ligase-like protein 12 [Nannochloropsis gaditana])

HSP 1 Score: 800.045 bits (2065), Expect = 0.000e+0
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0
Query:    1 MASRGRAPAFPIPVGGRTFPPSRPLSVYTDMPVLVHSLDLPARFYLTDHAQDADILWATPAFFASHVPQSARGRRQWKATLPFLGEVDDKCQLVHLLTRLSHTRSQLSIPWLPRSYCLPEDLPRLLDDWETPSSRPPSAPPSTWILKPPHLARGWDIALTRSLPCILRHLQASGRLLVSDYLTSPDLWLDGHKYDLRMYVLLLSPSLVLIHRQFRVRRASQPYSMALEHLEDLRIHLTNTTLGLSGLGQADAGGEEGHGCPTETVSCLDFVEKWESLHPGREGWEGVRRRIDSMLRECFSLIGRAGGREGGREALHVHDPYGRALVGVDVLLDRATLSPHLIEINASPNISGMLSERPGFSNEVFSAAFIEGGWREDGNGFYPLIDQQNPNEGCS 395
            MASRGRAPAFPIPVGGRTFPPSRPLSVYTDMPVLVHSLDLPARFYLTDHAQDADILWATPAFFASHVPQSARGRRQWKATLPFLGEVDDKCQLVHLLTRLSHTRSQLSIPWLPRSYCLPEDLPRLLDDWETPSSRPPSAPPSTWILKPPHLARGWDIALTRSLPCILRHLQASGRLLVSDYLTSPDLWLDGHKYDLRMYVLLLSPSLVLIHRQFRVRRASQPYSMALEHLEDLRIHLTNTTLGLSGLGQADAGGEEGHGCPTETVSCLDFVEKWESLHPGREGWEGVRRRIDSMLRECFSLIGRAGGREGGREALHVHDPYGRALVGVDVLLDRATLSPHLIEINASPNISGMLSERPGFSNEVFSAAFIEGGWREDGNGFYPLIDQQNPNEGCS
Sbjct:    1 MASRGRAPAFPIPVGGRTFPPSRPLSVYTDMPVLVHSLDLPARFYLTDHAQDADILWATPAFFASHVPQSARGRRQWKATLPFLGEVDDKCQLVHLLTRLSHTRSQLSIPWLPRSYCLPEDLPRLLDDWETPSSRPPSAPPSTWILKPPHLARGWDIALTRSLPCILRHLQASGRLLVSDYLTSPDLWLDGHKYDLRMYVLLLSPSLVLIHRQFRVRRASQPYSMALEHLEDLRIHLTNTTLGLSGLGQADAGGEEGHGCPTETVSCLDFVEKWESLHPGREGWEGVRRRIDSMLRECFSLIGRAGGREGGREALHVHDPYGRALVGVDVLLDRATLSPHLIEINASPNISGMLSERPGFSNEVFSAAFIEGGWREDGNGFYPLIDQQNPNEGCS 395          
BLAST of EWM28465.1 vs. NCBI_GenBank
Match: gi|971515374|dbj|GAQ82856.1| (Putative tubulin-tyrosine ligase [Klebsormidium nitens])

HSP 1 Score: 131.339 bits (329), Expect = 1.556e-29
Identity = 115/378 (30.42%), Postives = 177/378 (46.83%), Query Frame = 0
Query:   23 RPLSVYTDMPVLVHSLDLPARFYLTDHAQDADILWATPAFFASHVPQSARGRR--QWKATLPFLGEVDDKCQLVHLLTRLSHTRSQLSIPWLPRSYCLPEDLPRLLDDWETPSSRPPSAPPSTWILKPPHLARGWDIALTRSLPCILRHLQASGRLLVSDYLTSPDLWLDGHKYDLRMYVLLLS--PSLVLIHRQFRVRRASQPYSMALEHLEDLRIHLTNTTLGLSGLGQADAGGEEGHGCPTETVSCLDFVEKWESLHPGREGWEGVRRRIDSMLRECFSLIGRAGGREGGREALHVHDPYGRALVGVDVLLDRATLSPHLIEINASPNI------------SGMLSERPGFSNEVFSAAFIEGGWREDGNGFYPL 384
            RPL V+TD+   +  L+ P  F   D  +DADI+WA          ++A G R  Q+    PF   +  K  L H + +     +  +  WL  +Y L  +LP L+ D++    R  +   + WILKP ++AR  D ++TR+L  ++R ++ +G  +   Y+  P  +  G K+DLR+ VLL S  P  VL++  F  R ++ PY+M    L+D   H T                   +G   E ++   FV ++E+ H  +  W G+  RI +MLRE F    R            +HDP+ RA+ GVDV+LD + + P L+EI   P+              G L     F N VF + F    +RED +GF  L
Sbjct:  532 RPLKVFTDIREGMDHLNRP-EFVQVDDPRDADIVWAFDQI--DEASRAALGLRSDQYMNQFPFEACIVMKHHLAHTVKQ-----AHGAPAWLQPTYELDSELPALIGDFQ---ERERARVDNLWILKPWNMARSIDASVTRNLVQVIRSME-TGPKICQKYIERPATF-RGRKFDLRLVVLLRSVRPLEVLLYDVFWARFSNNPYTMDQSSLDDYETHFTVM----------------NYGRKLENINMDLFVAEFETDHNVK--WSGIHERIRAMLREVFEGAARVHP--------EMHDPHARAMYGVDVMLD-SDMQPKLLEITYCPDTMRACKYDVPRLQDGKLLLAKDFYNRVFGSLF----FRED-DGFESL 864          
BLAST of EWM28465.1 vs. NCBI_GenBank
Match: gi|919055147|ref|XP_013409511.1| (PREDICTED: tubulin--tyrosine ligase-like protein 12 [Lingula anatina])

HSP 1 Score: 124.02 bits (310), Expect = 3.453e-27
Identity = 111/384 (28.91%), Postives = 178/384 (46.35%), Query Frame = 0
Query:   11 PIPVGGRTFPP---SRPLSVYTDMPVLVHSLDLPARFYLTDHAQDADILWATPAFFASHVPQSARGRRQWKATLPFLGEVDDKCQLVHLLTRLSHTRSQL----SIP-WLPRSYCLPEDLPRLLDDWETPSSRPPSAPPSTWILKPPHLARGWDIALTRSLPCILRHLQASGRLLVSDYLTSPDLW----LDGHKYDLRMYVLL--LSPSLVLIHRQFRVRRASQPYSMALEHLEDLRIHLTNTTLGLSGLGQADAGGEEGHGCPTETVSCL--DFVEKWESLHPGREGWEGVRRRIDSMLRECFSLIGRAGGREGGREALHVHDPYGRALVGVDVLLDRAT-------LSPHLIEINASPNISGMLSERPGFSNEVFSAAFIE 371
            P+P   +TFPP    R + V+TD   L   L    RF L ++A+DADILW    FF  H   S     ++    P    +  K  +  +  R+S T  Q     S P WL ++Y L  +LP+    ++   S+      + WI KP +L+RG DI +T +L  I++ L  SG  +   YL    L+    + G K+DLR +V+L  + P  + + + F  R   +P+S  L+ L+D   H T+ T                +  P   V     DF+ + E  +PG   WE V ++I   L+E F+    A    G   +     P  RA+ G+D++L   T       + P ++E+N +P+ S +    P F N++F+ AF++
Sbjct:  262 PLPNLDKTFPPLPRDRRIKVFTDEQYLQQYL-TSDRFKLVNNAKDADILWLMEHFF-DHKEFSEEMPEKFINQFPHEAVLTVKDLMPIVARRVSSTTEQQDELESQPYWLSQTYNLNTELPQFASLFQKRESK---GLDNHWICKPYNLSRGLDIHITSNLNYIIK-LSDSGPKVACKYLDDTVLFHRPEIGGVKFDLRWFVMLCGVQPLKLCVCKTFYPRFPCKPFS--LDDLDDFEKHFTSMT----------------YVSPQNVVEVYRSDFISRLEEQYPGHH-WEDVEKKILKALQELFTAAYSAPPPRGIAPS-----PQSRAMYGIDIMLKWRTDQNGERYMQPIILEVNFTPDCSRVCKHYPDFYNDMFAVAFLD 615          
BLAST of EWM28465.1 vs. NCBI_GenBank
Match: gi|170042183|ref|XP_001848814.1| (SET and TTL domain-containing protein .9 [Culex quinquefasciatus] >gi|167865721|gb|EDS29104.1| SET and TTL domain-containing protein .9 [Culex quinquefasciatus])

HSP 1 Score: 120.939 bits (302), Expect = 2.926e-26
Identity = 99/372 (26.61%), Postives = 177/372 (47.58%), Query Frame = 0
Query:   19 FPPSRPLSVYTDMPVLVHSLDLPARFYLTDHAQDADILWATPAFFASHVPQSARGRRQWKATLPFLGEVDDKCQLVHLLTRLSHTRS-------QLSIPWLPRSYCLPEDLPRLLDDWETPSSRPPSAPPSTWILKPPHLARGWDIALTRSLPCILRHLQASGRLLVSDYLTSPDLW----LDGH--KYDLRMYVLLLSPSLV--LIHRQFRVRRASQPYSMALEHLEDLRIHLTNTTLGLSGLGQADAGGEEGHGCPTETVSCLDFVEKWESLHPGREGWEGVRRRIDSMLRECFSLIGRAGGREGGREALHVHDPYGRALVGVDVLLD----RATLSPHLIEINASPNISGMLSERPGFSNEVFSAAFIE 371
            F  + PL VY++   +   L+ PA F + D+A++ADILW T   F  +   S     ++    PF   +  K  L  +  R++  +S       + +  WLP +Y L  +L   +  ++   +R      + +I+KP +LARG D+ +T+SLP I+R LQ +G  +   Y+  P L+    ++G   K+D+R  VLL S   +   ++  F +R A++P+SM  +  +D   H T     +    + +A  +  H      + C +F+++W   +P +  WE +   I  ML+E      R G   G   +        RAL  VD++L+       + P ++E+N +P+        P F N++F+  F++
Sbjct:  266 FDGNSPLKVYSEYEFVNRYLNDPA-FEIVDNAEEADILWLT-THFKQYREFSQTTPNKYVNQFPFENVITIKDLLSVVCRRMATKKSADDEGSLEANPKWLPVTYNLKTELVEFVSYFQ---NRAQKGLDNHFIIKPWNLARGLDMYITKSLPQIMR-LQQTGPKIAQKYIEHPVLFDRPEVEGGRVKFDIRYVVLLKSVDELSAYVYTNFFLRFANKPFSM--DDFDDYEKHFT-----VMNYSRGEANFQLRH------MKCEEFLDQWAVQYP-KHAWENIEADICDMLKEVLQGATRVGPPCGIGASAQ-----SRALYAVDLMLEWTNAGTAIQPKILEMNFTPDCKRACEYYPNFYNDIFNLLFLD 612          
BLAST of EWM28465.1 vs. NCBI_GenBank
Match: gi|302808167|ref|XP_002985778.1| (hypothetical protein SELMODRAFT_123017 [Selaginella moellendorffii] >gi|300146285|gb|EFJ12955.1| hypothetical protein SELMODRAFT_123017 [Selaginella moellendorffii])

HSP 1 Score: 120.939 bits (302), Expect = 5.488e-26
Identity = 103/383 (26.89%), Postives = 160/383 (41.78%), Query Frame = 0
Query:    5 GRAPAFPIPVGGRTFPPSRPLSVYTDMPVLVHSLDLPARFYLTDHAQDADILWATPAFFASHVPQSARGRRQWKATLPFLGEVDDKCQLVHLLTRLSHTRSQLSIPWLPRSYCLPEDLPRLLDDWETPSSRPPSAPPSTWILKPPHLARGWDIALTRSLPCILRHLQASGRLLVSDYLTSPDLWLDGHKYDLRMYVLL--LSPSLVLIHRQFRVRRASQPYSMALEHLEDLRIHLTNTTLGLSGLGQADAGGEEGHGCPTETVSCLDFVEKWESLHPGREGWEGVRRRIDSMLRECFSLIGRAGGREGGREALH--VHDPYGRALVGVDVLLDRATLSPHLIEINASPNIS-------------GMLSERPGFSNEVFSAAFI 370
             + P   I     +    R  +VY+D+P ++  L+ P  F L D    ADI+WA+              + Q+    PF   +  K  L   + RL++   +    WLP +Y L   L  L+ D+   ++R      + WILKP ++AR  D  +TRSLP I+RH++ +G  +   Y+ +P L+  G K+DLR  VLL  L P  + +   F +R A   Y++    L D   H T                   +      V+  DFV ++E  H     W  +  R+  MLR  F               +H  +H P  RA+ GVDV+LD     P L+E+   P+ +               + +   F N VF   F+
Sbjct:  493 SKKPTDIISTSQHSNGNKRHFTVYSDIPQVMDFLNRP-EFTLIDDPSKADIIWASWQLDEDACKAFGLNQDQFTNQFPFEACIVMKHNLAETM-RLAYGNPE----WLPTTYNLESHLAALIGDY---NAREKRGDDNLWILKPWNMARTIDTTVTRSLPAIIRHME-TGPKICQKYIETPALF-RGKKFDLRYVVLLRCLQPLQLFLCNVFWIRLALNDYTLDESSLSDYETHFTVM----------------NYRNKLNHVNTHDFVPEFEKEH--NVNWRDIHERVREMLRAVFE----------AASTIHPEMHSPKSRAIYGVDVMLD-TNFHPKLLEVTYCPDCTRACKYDVKKVVGDNTVMKGADFFNNVFGCLFL 835          
BLAST of EWM28465.1 vs. NCBI_GenBank
Match: gi|557752566|ref|XP_005176031.1| (PREDICTED: tubulin--tyrosine ligase-like protein 12 [Musca domestica])

HSP 1 Score: 115.931 bits (289), Expect = 1.596e-24
Identity = 101/364 (27.75%), Postives = 163/364 (44.78%), Query Frame = 0
Query:   24 PLSVYTDMPVLVHSLDLPARFYLTDHAQDADILWATPAFFASHVPQSARGR-RQWKATLPFLGEVDDKCQLVHLLTRLS---HTRSQLSI--PWLPRSYCLPEDLPRLLDDWETPSSRPPSAPPSTWILKPPHLARGWDIALTRSLPCILRHLQASGRLLVSDYLTSPDLWLDGH-----KYDLRMYVLLLS--PSLVLIHRQFRVRRASQPYSMALEHLEDLRIHLTNTTLGLSGLGQADAGGEEGHGCPTETVSCLDFVEKWESLHPGREGWEGVRRRIDSMLRECFSLIGRAGGREGGREALHVHDPYGRALVGVDVLLD----RATLSPHLIEINASPNISGMLSERPGFSNEVFSAAFI 370
            PL VY +  ++   L  P  F L D+++DAD+LW T  F      + AR    ++    PF   +  K  L     R +   H +  L     W+P +Y L  +L +    ++   +R      + WI+KP +LARG D  +++SL  I+R L  +G  +   Y+  P L+   +     K+D+R  VLL S  P    IHR+F +R +++P+S  L+  +D   H T        +       E  H      V C DF+E W+  +P +  W  +  RI +ML E      +A    G +          RAL   D++L+      T+ P L+E+N +P+        P F N++F   F+
Sbjct:  278 PLKVYAEYDIVRQHLTSPY-FTLVDNSEDADVLWLTTHF--RDFAELARTTPNKFVNQFPFEYVITIKDLLSITCRRAATEHHNKETLETYPTWMPTTYNLKTELLQFASYYQ---NRAAKGLDNHWIVKPWNLARGLDTHISKSLSQIVR-LPTTGPKIAQKYIEDPVLFYRDNLSAKVKFDVRYVVLLKSVKPLEAFIHRKFYLRFSNKPFS--LDRFDDYEKHFT--------VMNYQDNAELHH------VKCDDFLEMWQQQYP-KHSWSDIEDRICTMLYEMLECATKAPAPCGIQPCSQ-----SRALYAADIMLEWNNKSNTILPKLLEVNWTPDCKRACDYYPDFYNDIFKLLFL 612          
BLAST of EWM28465.1 vs. NCBI_GenBank
Match: gi|194757443|ref|XP_001960974.1| (uncharacterized protein Dana_GF11237 [Drosophila ananassae] >gi|190622272|gb|EDV37796.1| uncharacterized protein Dana_GF11237 [Drosophila ananassae])

HSP 1 Score: 114.775 bits (286), Expect = 3.923e-24
Identity = 106/378 (28.04%), Postives = 167/378 (44.18%), Query Frame = 0
Query:   12 IPVGGRTFPPSRPLSVYTDMPVLVHSLDLPARFYLTDHAQDADILWATPAFFASHVPQSARGRRQWKATLPFLGEVDDKCQLVHLLTRLSHTRSQLSIP------WLPRSYCLPEDLPRLLDDWETPSSRPPSAPPSTWILKPPHLARGWDIALTRSLPCILRHLQASGRLLVSDYLTSPDLW----LDG-HKYDLRMYVLLLS--PSLVLIHRQFRVRRASQPYSMALEHLEDLRIHLTNTTLGLSGLGQADAGGEEGHGCPTETVSCLDFVEKWESLHPGREGWEGVRRRIDSMLRECFSLIGRAGGREGGREALHVHDPYGRALVGVDVLL-----DRATLSPHLIEINASPNISGMLSERPGFSNEVFSAAFIE 371
            +PVG R      PL V+ +  V+   L  P  F L ++ ++AD+LW T   F +    S +  R++    PF   +  K  L+ ++ R +      S+       WLP +Y L  +L      ++   +R      + WI+KP +LARG D  +T ++  I+R L A+G  +   Y+  P L+    LD   K+D+R  +LL S  P    +HR+F +R A+ P+S  L+  +D   H T                EE        V C+DF+  W+  +P    W  + RRI SML E      +A    G            RAL   D++L     D   + P L+EIN +P+        P F N++F   F++
Sbjct:  268 VPVGSR----CDPLKVFAEYEVVRKHLTSP-EFILVNNEEEADVLWLT-HHFKTFEEFSEQSPRKFINQFPFEYVITIK-DLLSIVGRRAAKEHHNSLTLDTYPDWLPTTYNLSTELREFASYYQ---ARAAKGLDNHWIIKPWNLARGLDTHITDNIKQIVR-LPATGPKIAQKYIERPVLFKREELDEPVKFDIRYVILLKSVKPLRAYVHRKFFLRFANHPFS--LDQFDDYEKHYTVMNYQ-----------EEAQ---LHHVKCVDFLGLWQEQYPDN-AWTDLERRICSMLYEVLQCASQADPPCGLAPCAQ-----SRALYAADIMLRWTDEDNKVMQPQLLEINWTPDCKRACDYYPDFFNDIFRLLFLD 612          
BLAST of EWM28465.1 vs. NCBI_GenBank
Match: gi|302789047|ref|XP_002976292.1| (hypothetical protein SELMODRAFT_105046 [Selaginella moellendorffii] >gi|300155922|gb|EFJ22552.1| hypothetical protein SELMODRAFT_105046 [Selaginella moellendorffii])

HSP 1 Score: 114.775 bits (286), Expect = 5.292e-24
Identity = 100/383 (26.11%), Postives = 161/383 (42.04%), Query Frame = 0
Query:    5 GRAPAFPIPVGGRTFPPSRPLSVYTDMPVLVHSLDLPARFYLTDHAQDADILWATPAFFASHVPQSARGRRQWKATLPFLGEVDDKCQLVHLLTRLSHTRSQLSIPWLPRSYCLPEDLPRLLDDWETPSSRPPSAPPSTWILKPPHLARGWDIALTRSLPCILRHLQASGRLLVSDYLTSPDLWLDGHKYDLRMYVLL--LSPSLVLIHRQFRVRRASQPYSMALEHLEDLRIHLTNTTLGLSGLGQADAGGEEGHGCPTETVSCLDFVEKWESLHPGREGWEGVRRRIDSMLRECFSLIGRAGGREGGREALH--VHDPYGRALVGVDVLLDRATLSPHLIEINASPNIS-------------GMLSERPGFSNEVFSAAFI 370
             + P   I     +    R  +VY+D+P ++  L+ P  F L D    ADI+WA+              + Q+    PF   +  K  L   + RL++   +    WLP +Y L   L  L+ D+   ++R      + WILKP ++AR  D  +TRSLP I+RH++ +G  +   Y+ +P L+  G K+DLR  VLL  L P  + +   F +R A   Y++    L +   H T                   +      V+  DFV ++E  H     W  +  R+  MLR  F               +H  ++ P  RA+ GVD++LD +   P L+E+   P+ +               + +   F N VF   F+
Sbjct:  493 SKRPTDIISTSQHSNGNKRHFTVYSDIPQVMDFLNRP-EFTLIDDPSKADIIWASWQVDEEACKAFGLNQDQFTNQFPFEACIVMKHNLAETM-RLAYGNPE----WLPTTYNLESHLAALIGDY---NAREKRGDDNLWILKPWNMARTIDTTVTRSLPAIIRHME-TGPKICQKYIETPALF-RGKKFDLRYVVLLRCLQPLELFLCDVFWIRLALNDYTLDESSLSEYETHFTVM----------------NYRNKLNHVNTHDFVPEFEKEH--NVNWRDIHERVRKMLRAVFE----------AASTIHQEMYSPKSRAIYGVDIMLD-SNFHPKLLEVTYCPDCTRACKYDVKKVVGDNTVMKGVDFFNNVFGCLFL 835          
BLAST of EWM28465.1 vs. NCBI_GenBank
Match: gi|672107934|ref|XP_008782531.1| (PREDICTED: tubulin--tyrosine ligase-like protein 12 [Phoenix dactylifera])

HSP 1 Score: 114.39 bits (285), Expect = 8.019e-24
Identity = 103/353 (29.18%), Postives = 163/353 (46.18%), Query Frame = 0
Query:   10 FPIPV----GGRTFPPS--RPLSVYTDMPVLVHSLDLPARFYLTDHAQDADILWATPAFFASHVPQSARGRRQWKATLPFLGEVDDKCQLV-HLLTRLSHTRSQLSIPWLPRSYCLPEDLPRLLDDWETPSSRPPSAPPSTWILKPPHLARGWDIALTRSLPCILRHLQASGRLLVSDYLTSPDLWLDGHKYDLRMYVLL--LSPSLVLIHRQFRVRRASQPYSMALEHLEDLRIHLTNTTLGLSGLGQADAGGEEGHGCPTETVSCLDFVEKWESLHPGREGWEGVRRRIDSMLRECFSLIGRAGGREGGREALH--VHDPYGRALVGVDVLLDRATLSPHLIEINASPNIS 351
            FP+PV      R+  PS  R L VYTD+P +   L  P  F LT   +DA+I+W +                Q+    PF     + C ++ H L    H ++Q S  WL  +Y L  +L +L+ D+     R      + WILKP ++AR  D  +T  L  I+R L  +G  +   Y+  P L+  G K+DLR  VL+  ++P  + +   F VR A+ PY++  + L +   H T            +  G   H      ++  DFV ++E  H  +  W  +R+RI +M+R  F              A+H  +H P+ RA+ GVDV+LD   + P ++E+   P+ +
Sbjct:  518 FPLPVMEAPATRSILPSDGRALLVYTDIPHVEEFLTRP-EFILTTDPKDANIIWTSMQIDPEVRKALGLSDNQYINQFPF-----EACLVMKHHLAETIH-KAQGSPEWLQPTYNLEIELSQLIGDYHV---RKRDGRNNLWILKPWNMARTIDTTVTGDLSAIIR-LMETGPKICQKYIDCPALF-KGKKFDLRYIVLVCSMNPVEIFLADVFWVRLANNPYTLDKDSLFEYETHFT----------VMNYRGRLNH------LNTPDFVREFEEEHQVK--WLDIRQRIRNMIRSIFD----------SAAAVHPEMHSPFSRAMYGVDVMLDHLYM-PKILEVTYCPDCT 829          
BLAST of EWM28465.1 vs. NCBI_GenBank
Match: gi|817200656|ref|XP_012276050.1| (PREDICTED: tubulin--tyrosine ligase-like protein 12 [Orussus abietinus] >gi|817200658|ref|XP_012276051.1| PREDICTED: tubulin--tyrosine ligase-like protein 12 [Orussus abietinus])

HSP 1 Score: 113.235 bits (282), Expect = 1.428e-23
Identity = 100/362 (27.62%), Postives = 160/362 (44.20%), Query Frame = 0
Query:   25 LSVYTDMPVLVHSLDLPARFYLTDHAQDADILWATPAFFASHVPQSARGRRQWKATLPFLGEVDDKCQLVHLLTRLSHTRSQL------SIP-WLPRSYCLPEDLPRLLDDWETPSSRPPSAPPSTWILKPPHLARGWDIALTRSLPCILRHLQASGRLLVSDYLTSPDLWLDGH----KYDLRMYVLLLS--PSLVLIHRQFRVRRASQPYSMALEHLEDLRIHLTNTTLGLSGLGQADAGGEEGHGCPTETVSCLDFVEKWESLHPGREGWEGVRRRIDSMLRECFSLIGRAGGREGGREALHVHDPYGRALVGVDVLL--DRATLSPHLIEINASPNISGMLSERPGFSNEVFSAAFIE 371
            L VY+    +   L+ PA F +  + ++ADILW T   F  +   S +  R +    PF   +  K  L+ ++ R     S+       + P WLP +Y L  +L   +  ++   +R   +  + WI KP +LARG D  +T +L  IL+ L A+G  +   Y+  P L+L       K+D+R  VLL S  P    ++  F +R A++ +   L++ +    H T        L                 + C DFV+KW+  +P     E +  +I  ML+E F     A   +G       H P  RAL  VD++L  D   + P L+E N SP+        P F N++F   F++
Sbjct:  271 LKVYSQYSFVNEYLNDPA-FEIVSNEEEADILWLT-THFKDYKTLSTKSPRVFVNQFPFEHVLTVK-DLLSIICRRKAGESKYDPLTLDTFPKWLPTTYNLSTELVEFVSYFQ---NREAKSLDNYWICKPWNLARGLDTHITNNLYYILK-LPATGPKVAQKYIFDPILYLRTEIGKVKFDIRYVVLLKSVKPLSAYVYTNFFLRFANKQF--GLDNFDVYEQHFTVMNYSEEALCH---------------IKCEDFVKKWQQQYPLYPWKEHIEPKIMQMLKEVFEAAVAAEPPKGI-----AHSPQSRALYAVDLMLQWDEEGMEPVLLEFNFSPDCKRACEYYPNFYNDIFKCLFLD 603          
The following BLAST results are available for this feature:
BLAST of EWM28465.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110875|gb|EWM28465.1|0.000e+0100.00tubulin--tyrosine ligase-like protein 12 [Nannochl... [more]
gi|971515374|dbj|GAQ82856.1|1.556e-2930.42Putative tubulin-tyrosine ligase [Klebsormidium ni... [more]
gi|919055147|ref|XP_013409511.1|3.453e-2728.91PREDICTED: tubulin--tyrosine ligase-like protein 1... [more]
gi|170042183|ref|XP_001848814.1|2.926e-2626.61SET and TTL domain-containing protein .9 [Culex qu... [more]
gi|302808167|ref|XP_002985778.1|5.488e-2626.89hypothetical protein SELMODRAFT_123017 [Selaginell... [more]
gi|557752566|ref|XP_005176031.1|1.596e-2427.75PREDICTED: tubulin--tyrosine ligase-like protein 1... [more]
gi|194757443|ref|XP_001960974.1|3.923e-2428.04uncharacterized protein Dana_GF11237 [Drosophila a... [more]
gi|302789047|ref|XP_002976292.1|5.292e-2426.11hypothetical protein SELMODRAFT_105046 [Selaginell... [more]
gi|672107934|ref|XP_008782531.1|8.019e-2429.18PREDICTED: tubulin--tyrosine ligase-like protein 1... [more]
gi|817200656|ref|XP_012276050.1|1.428e-2327.62PREDICTED: tubulin--tyrosine ligase-like protein 1... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2210rna2210Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications