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Properties
| Property Name | Value |
|---|
| Product | tubulin--tyrosine ligase-like protein 12 |
| Orig transcript id | gnl|cribi|Naga_100190g9.3116.mrna |
| Orig protein id | gnl|cribi|Naga_100190g9.3116 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:1167314..1168750 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2210 ID=rna2210|Name=rna2210|organism=Nannochloropsis gaditana|type=mRNA|length=1128bp
ATGAGGCACACATGGAGCAGCATCGCCTGCCTTTTTTCGCTGCTTATCAG
CCAGAGCACAATTGGGTTTCTTCTGCCTTATCCTTCCGGTTCTTTTCCCA
TGGCCCGCCCTCACTCCACTCTTTCCTCTCAAGTGGCACTTTTCGCAACA
ACTGTGCCGCGAGCCGTCGGATTGGAAGCAATTCCAGAAGCTGACTTGAA
AGCAGCGGACAAAACAGCCCCCCCATCCACTTTTTTTGAGTGTACGCTGC
AAGCATACAACGCAGCAGCAGCAGCTATCAAGGACGGTTACAAGCTGCTA
GAAGTAGAATTCCCTCCCCTACCTGCCGCTGAGATGGCTTCCCAGGCCTC
CAGCGCCAACAGCATTGGCTCCGCCAACATCAACCTGGCGAACGAGATGG
CCCAGTACTTCGTGCGTGAAGGCAAGCAAGTTGTGATTCTTGTGCCCGAC
AAGGACGAATTGGATTTGATCGAAGAGGGGCTCGGCACCCTCTCGCCTTC
ACCGAACGTGACCATCCGCGCCGTCCGCGCCCGAAATTCGGAGTCCGCCG
ACACCATGGGGGAACTGATCCTGGGGATTTTTTCCCGGGCAGCCAAAGGC
AAGGTCTTGCCCTGGTACAACGCGGACATTTACATCAGCGTCATCTCCTC
CGGCCAGGAGCTTCCCGATCTGGAGGCTTTGCACCAAGCCGATCCCACCA
AGCCCCTCATTTTCTTCAATTTGAACCTGGAAACCCACCGGGGAGACCTG
GGCCTGCCCGCCTTTCCCTCCAAGGACCTGCATTATCGCTTTCTGTCCAA
TATCAAACCCGTCTATTTGCTTCGCACACGTCAGTACGCCCAGACCCTGT
CCCGCCCTCCCTTCATCCTGAACTACCAGGGTGCCCTTTTTCGAACATAC
CCTGGGGGGTACCAATGCATGCTCGACACGGGAAACGGTCGGTATCGCCG
GGTGGAAACCTCCCGTGAACGTCCCGCATTGAGCGGTTTCAAGGACATCA
TAACGCAGGCGTTGGATGTTGAGGATAATGACACACTCGCCAGTTTGAGG
AGGGGGGCCTTTAGCAAGACGTGGTGGGAGAAGGAAGAGGGATGGGCGAA
GGAATCGTCGGACAACTGGCGTACGTGA back to topprotein sequence of rna2210 >rna2210-protein ID=rna2210-protein|Name=rna2210|organism=Nannochloropsis gaditana|type=polypeptide|length=395bp
MASRGRAPAFPIPVGGRTFPPSRPLSVYTDMPVLVHSLDLPARFYLTDHA
QDADILWATPAFFASHVPQSARGRRQWKATLPFLGEVDDKCQLVHLLTRL
SHTRSQLSIPWLPRSYCLPEDLPRLLDDWETPSSRPPSAPPSTWILKPPH
LARGWDIALTRSLPCILRHLQASGRLLVSDYLTSPDLWLDGHKYDLRMYV
LLLSPSLVLIHRQFRVRRASQPYSMALEHLEDLRIHLTNTTLGLSGLGQA
DAGGEEGHGCPTETVSCLDFVEKWESLHPGREGWEGVRRRIDSMLRECFS
LIGRAGGREGGREALHVHDPYGRALVGVDVLLDRATLSPHLIEINASPNI
SGMLSERPGFSNEVFSAAFIEGGWREDGNGFYPLIDQQNPNEGCS back to topmRNA from alignment at CM002458.1:1167314..1168750- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2210 ID=rna2210|Name=rna2210|organism=Nannochloropsis gaditana|type=mRNA|length=1437bp|location=Sequence derived from alignment at CM002458.1:1167314..1168750- (Nannochloropsis gaditana)
GTGAGGCGATAGATGCAAACGACGGGGCAGAGTCCTCCATGGCTTCACGA
GGCCGAGCGCCGGCGTTTCCGATACCGGTGGGAGGGCGCACCTTCCCTCC
TTCCCGCCCTCTCTCCGTGTACACGGACATGCCCGTCCTCGTACACAGCT
TGGACTTGCCTGCCCGCTTCTATCTCACCGACCATGCTCAGGACGCTGAC
ATCTTGTGGGCGACGCCGGCCTTTTTCGCTTCCCACGTCCCGCAGTCGGC
CCGGGGCCGGAGGCAGTGGAAAGCAACCCTGCCCTTCCTGGGGGAGGTGG
ACGATAAATGCCAGCTGGTGCACCTGCTGACTCGGCTCTCCCACACACGG
TCCCAGCTCTCTATACCCTGGCTGCCTCGCTCCTACTGCCTTCCCGAGGA
CCTTCCGCGGCTTCTCGATGACTGGGAGACCCCTTCCTCCCGCCCGCCCT
CCGCCCCGCCCTCGACCTGGATCCTCAAACCCCCCCATCTGGCTCGAGGA
TGGGATATTGCTCTCACTCGCTCCCTACCCTGTATCCTTCGGCATTTGCA
AGCGTCGGGGAGGCTACTTGTCTCAGACTACCTGACTTCTCCAGACCTGT
GGCTCGACGGACACAAGTACGACCTGCGCATGTACGTCTTGCTCCTCAGC
CCCTCCCTCGTCTTGATCCACAGACAATTCCGAGTTCGGAGGGCTAGCCA
GCCATATTCAATGGCGTTGGAACATTTGGAGGATTTGAGAATACACCTGA
CCAATACTACTTTGGGCCTCAGCGGGCTGGGACAAGCGGACGCGGGAGGC
GAGGAAGGGCATGGATGCCCGACGGAGACCGTCTCCTGCCTCGACTTTGT
GGAGAAGTGGGAAAGCCTGCACCCTGGACGTGAAGGCTGGGAGGGTGTGC
GTCGACGCATCGACAGCATGTTGAGGGAGTGCTTTAGCCTAATAGGAAGG
GCAGGTGGGCGGGAGGGAGGGAGGGAGGCATTGCACGTTCATGATCCCTA
CGGACGGGCCTTGGTAGGTGTGGATGTATTGCTGGACCGTGCGACGCTAT
CACCGCATTTGATCGAGATAAATGCTTCACCGAATATCTCGGGCATGCTA
TCCGAACGTCCCGGGTTCTCCAATGAAGTCTTCTCAGCGGCCTTCATCGA
GGGAGGGTGGCGGGAAGATGGAAACGGCTTTTATCCTTTGATTGATCAGC
AGAATCCCAATGAAGGCTGCTCATGACATCGAGACCATACCGGGGCTTAG
TTACATGAAGGTGTCATGGGAGGCTTGTTGCTTTCACTTGTTGCCCTTTT
TCTCCGAAACGTATAAATTAATAATGTTTGGCTGCAGCGTTGTGTCCTCA
CCCGTTGTTTTTTTGGGATGGAAAACCAAAATTGTATTCTCCAAGATAAC
ATGTATCGATGTCCGGCAAAGCGAAGTAAAAAAGACC back to topCoding sequence (CDS) from alignment at CM002458.1:1167314..1168750- >rna2210 ID=rna2210|Name=rna2210|organism=Nannochloropsis gaditana|type=CDS|length=1188bp|location=Sequence derived from alignment at CM002458.1:1167314..1168750- (Nannochloropsis gaditana)
ATGGCTTCACGAGGCCGAGCGCCGGCGTTTCCGATACCGGTGGGAGGGCG
CACCTTCCCTCCTTCCCGCCCTCTCTCCGTGTACACGGACATGCCCGTCC
TCGTACACAGCTTGGACTTGCCTGCCCGCTTCTATCTCACCGACCATGCT
CAGGACGCTGACATCTTGTGGGCGACGCCGGCCTTTTTCGCTTCCCACGT
CCCGCAGTCGGCCCGGGGCCGGAGGCAGTGGAAAGCAACCCTGCCCTTCC
TGGGGGAGGTGGACGATAAATGCCAGCTGGTGCACCTGCTGACTCGGCTC
TCCCACACACGGTCCCAGCTCTCTATACCCTGGCTGCCTCGCTCCTACTG
CCTTCCCGAGGACCTTCCGCGGCTTCTCGATGACTGGGAGACCCCTTCCT
CCCGCCCGCCCTCCGCCCCGCCCTCGACCTGGATCCTCAAACCCCCCCAT
CTGGCTCGAGGATGGGATATTGCTCTCACTCGCTCCCTACCCTGTATCCT
TCGGCATTTGCAAGCGTCGGGGAGGCTACTTGTCTCAGACTACCTGACTT
CTCCAGACCTGTGGCTCGACGGACACAAGTACGACCTGCGCATGTACGTC
TTGCTCCTCAGCCCCTCCCTCGTCTTGATCCACAGACAATTCCGAGTTCG
GAGGGCTAGCCAGCCATATTCAATGGCGTTGGAACATTTGGAGGATTTGA
GAATACACCTGACCAATACTACTTTGGGCCTCAGCGGGCTGGGACAAGCG
GACGCGGGAGGCGAGGAAGGGCATGGATGCCCGACGGAGACCGTCTCCTG
CCTCGACTTTGTGGAGAAGTGGGAAAGCCTGCACCCTGGACGTGAAGGCT
GGGAGGGTGTGCGTCGACGCATCGACAGCATGTTGAGGGAGTGCTTTAGC
CTAATAGGAAGGGCAGGTGGGCGGGAGGGAGGGAGGGAGGCATTGCACGT
TCATGATCCCTACGGACGGGCCTTGGTAGGTGTGGATGTATTGCTGGACC
GTGCGACGCTATCACCGCATTTGATCGAGATAAATGCTTCACCGAATATC
TCGGGCATGCTATCCGAACGTCCCGGGTTCTCCAATGAAGTCTTCTCAGC
GGCCTTCATCGAGGGAGGGTGGCGGGAAGATGGAAACGGCTTTTATCCTT
TGATTGATCAGCAGAATCCCAATGAAGGCTGCTCATGA back to top
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