Naga_100058g25, gene2100 (gene) Nannochloropsis gaditana

Overview
NameNaga_100058g25
Unique Namegene2100
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1136235..1140839 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100058g25
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1136235..1140839 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003677DNA binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL105ngnoL105Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G00710NO04G00710Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2197rna2197-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2197rna2197Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2197

>rna2197-protein ID=rna2197-protein|Name=rna2197|organism=Nannochloropsis gaditana|type=polypeptide|length=888bp
MGVETGPSTRQSPANMTPSSQRQPLQKHTPRKTDTTRTVVGSGNGKKQTR
SSSASPTKCSPSFKRRKTESEGESAVPTVLSQSINRLSPGPHPSSPHDLV
CTKSERETGDLDDLRALNDPILTASIKAAQEEAERAVAVARAKEDEARKK
SGPVVPRLLQGVGVTVNDAPTAEEALESTSNAPASHASSSLDPGLPMNGA
ATSRSGMRRTAQLDTLLQKASHFNNFILGKLEHGGKAAASAAPVGAVKSK
KKRGPGRSSNEDEAAAAQAAHDREEALGDAARKMEGRKGGEGSMEQPASL
KNGVLKTYQLEGLNWLSSLWMNGLNGILADEMGLGKTIQVISLFALLREK
GVNGPFLVVAPLATLPNWVLEVRKWLPSASVCLYHGTVPERQALREEQMP
VGRERETSKLFPIVVTSYEMASIDRKHLMSYHWRWLVVDEGQRIKNRNGR
LFNELKEIPSESRLLLSGTPIQNSLEELWTLLNFCQPDIFDDLGVFRSWF
GFQSIGKDTTVDDIIDEEHRERVVTKLHEVLRPFLLRRMKADVNIDLPAK
KELVVYAHMSEIQHDYYRLAQAGQLREALVQQGVPDADKIRQTNPQMVLR
KICNHPFLVAEPVTKAGTPIGEANPKILIEACGKLKLLDRMMCRLHAQGH
RVLLFSQMTEMLTVLEDYLHYRQWKYCRIDGSVKVDARQEQIEAFNKDPS
IFCFLLSTRAGGLGINLAGADTVIIYDSDWNPHRDAQAQDRAHRIGQTKA
VAVYRMLTIGSVEIEMMEAQISKKKLERLSITGGDFRQAGRRSRGDITTE
GLRRLLADDVKDIQRRHGDGGQEGGKEGGKGGAEEDITEEELGKILDRKG
MFEEGGLSVDGRMYDLVVIAGSDLLSGISQGNREGGRE
back to top
Synonyms
Publications