EWM28489.1, cds2173 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28489.1 vs. NCBI_GenBank
Match: gi|585110905|gb|EWM28489.1| (MAGE protein [Nannochloropsis gaditana]) HSP 1 Score: 926.006 bits (2392), Expect = 0.000e+0 Identity = 443/443 (100.00%), Postives = 443/443 (100.00%), Query Frame = 0
Query: 1 MPKNNYKGVVSCLCVHVEVVPVCNKGWDRAVYDVKASSFSYTMKNISVEARDTCVVNCRDTIARIRDIQAQSIPFKTSLYRMPKGRKRRVPDVAEDEEEAETETCRAPGNEDREDEADADREKEHEKENTSLVGKSIRASTRASRMTTAVVEDDASEDEKLEEEEDKTSRRGKGARPQSRHLSSRKRQPPMKASQDGNYYCQTPVETLFSFTQTEDGPVINQREAQASQCEMRPQDEKQFQGLSQDQQKVVVSEAIRYIFFKAARREPVHRQKLHDEVVKKYGKALVRPVLKAAAEQLESIFGYTLVTPPAYRFPRDADQESYYLITSIRSHSLSKAMNAYGKDVAYRGFCMLVMGLVFCAQNKIPEQVLFKQLQEAQDGLELVSKSQAGGGGARGGMRFTVPWTGNDGLRGSPCQDGTGAQAWSKMRGATPVSASRWFDWLV 443
MPKNNYKGVVSCLCVHVEVVPVCNKGWDRAVYDVKASSFSYTMKNISVEARDTCVVNCRDTIARIRDIQAQSIPFKTSLYRMPKGRKRRVPDVAEDEEEAETETCRAPGNEDREDEADADREKEHEKENTSLVGKSIRASTRASRMTTAVVEDDASEDEKLEEEEDKTSRRGKGARPQSRHLSSRKRQPPMKASQDGNYYCQTPVETLFSFTQTEDGPVINQREAQASQCEMRPQDEKQFQGLSQDQQKVVVSEAIRYIFFKAARREPVHRQKLHDEVVKKYGKALVRPVLKAAAEQLESIFGYTLVTPPAYRFPRDADQESYYLITSIRSHSLSKAMNAYGKDVAYRGFCMLVMGLVFCAQNKIPEQVLFKQLQEAQDGLELVSKSQAGGGGARGGMRFTVPWTGNDGLRGSPCQDGTGAQAWSKMRGATPVSASRWFDWLV
Sbjct: 1 MPKNNYKGVVSCLCVHVEVVPVCNKGWDRAVYDVKASSFSYTMKNISVEARDTCVVNCRDTIARIRDIQAQSIPFKTSLYRMPKGRKRRVPDVAEDEEEAETETCRAPGNEDREDEADADREKEHEKENTSLVGKSIRASTRASRMTTAVVEDDASEDEKLEEEEDKTSRRGKGARPQSRHLSSRKRQPPMKASQDGNYYCQTPVETLFSFTQTEDGPVINQREAQASQCEMRPQDEKQFQGLSQDQQKVVVSEAIRYIFFKAARREPVHRQKLHDEVVKKYGKALVRPVLKAAAEQLESIFGYTLVTPPAYRFPRDADQESYYLITSIRSHSLSKAMNAYGKDVAYRGFCMLVMGLVFCAQNKIPEQVLFKQLQEAQDGLELVSKSQAGGGGARGGMRFTVPWTGNDGLRGSPCQDGTGAQAWSKMRGATPVSASRWFDWLV 443
BLAST of EWM28489.1 vs. NCBI_GenBank
Match: gi|567992081|gb|ETL42280.1| (hypothetical protein, variant [Phytophthora parasitica] >gi|570953524|gb|ETP18781.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1]) HSP 1 Score: 68.1662 bits (165), Expect = 2.813e-9 Identity = 53/195 (27.18%), Postives = 93/195 (47.69%), Query Frame = 0
Query: 206 ETLFSFTQTEDGPVINQREA--------QASQCEMRPQDEKQFQGLSQDQQKVVVSEAIRYIFFKAARREPVHRQKLHDEVVKKYGKALVRPVLKAAAEQLESIFGYTLVTPPAYRFPRDADQESYYLITSIRSHSLSKAMNAYGKDVAYRGFCMLVMGLVFCA-QNKIPEQVLFKQLQEAQDGLEL-VSKSQAG 390
E L FTQT+ ++Q E +AS+ P K LS + ++ +RY+ +K + P+ + +V +Y K++ R A +++E +FGY +V + +E Y ++ + S + MN GK + RGF M+V+GL++CA ++ E L+KQL ++L V+ Q G
Sbjct: 59 EALLDFTQTDYAVQMSQAEPLAGDDSDEEASKRNKEPTKPKALHKLSDKALDELTAKLVRYVLYKGGLKLPIKFADISKDVFPQY-KSVSRYFFYHAKQKIERVFGYRVV-----QVEDSTSKELYLVLNNASSQEHLQLMNKTGK-ASSRGFLMMVLGLLWCAPARRLSEDDLWKQLIRLDPAVKLKVNHPQLG 246
BLAST of EWM28489.1 vs. NCBI_GenBank
Match: gi|567992080|gb|ETL42279.1| (hypothetical protein L916_06866 [Phytophthora parasitica] >gi|570953523|gb|ETP18780.1| hypothetical protein F441_07029 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-9 Identity = 53/195 (27.18%), Postives = 93/195 (47.69%), Query Frame = 0
Query: 206 ETLFSFTQTEDGPVINQREA--------QASQCEMRPQDEKQFQGLSQDQQKVVVSEAIRYIFFKAARREPVHRQKLHDEVVKKYGKALVRPVLKAAAEQLESIFGYTLVTPPAYRFPRDADQESYYLITSIRSHSLSKAMNAYGKDVAYRGFCMLVMGLVFCA-QNKIPEQVLFKQLQEAQDGLEL-VSKSQAG 390
E L FTQT+ ++Q E +AS+ P K LS + ++ +RY+ +K + P+ + +V +Y K++ R A +++E +FGY +V + +E Y ++ + S + MN GK + RGF M+V+GL++CA ++ E L+KQL ++L V+ Q G
Sbjct: 59 EALLDFTQTDYAVQMSQAEPLAGDDSDEEASKRNKEPTKPKALHKLSDKALDELTAKLVRYVLYKGGLKLPIKFADISKDVFPQY-KSVSRYFFYHAKQKIERVFGYRVV-----QVEDSTSKELYLVLNNASSQEHLQLMNKTGK-ASSRGFLMMVLGLLWCAPARRLSEDDLWKQLIRLDPAVKLKVNHPQLG 246
BLAST of EWM28489.1 vs. NCBI_GenBank
Match: gi|299117332|emb|CBN75292.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 66.6254 bits (161), Expect = 1.065e-8 Identity = 45/158 (28.48%), Postives = 89/158 (56.33%), Query Frame = 0
Query: 227 ASQCEMRPQDEKQFQGLSQDQQKVVVSEAIRYIFFKAARREPVHRQKLHDEVV-KKYGKA-LVRPVLKAAAEQLESIFGYTLVTPPAYR--FPRDADQESYYLITSIRSHSLSKAMNAYGKDVAYRGFCMLVMGLVFCAQNK-IPEQVLFKQLQEAQD 379
+ + ++ +D+K+ LS +K +V + +R++ K EP+ R+++ D V+ +KY KA +++ +L A E+L+ G+ + TP + F +D ++Y++ + + K + GK A RG +LV+ +VFC+ +K + E LFK+L + D
Sbjct: 9 SKEVQIEEKDQKKGNELSDLAKKDLVKKMMRFLLMKGLNHEPLTRKEVMDNVLGEKYRKAGVLKFILNKADEKLQQGMGFKIKTPLPDKPWFVKD----TFYVVNVLNNEQHFKEV-LRGKGQAGRGLLVLVLSIVFCSSDKSVAENQLFKKLHDHVD 161
BLAST of EWM28489.1 vs. NCBI_GenBank
Match: gi|194691392|gb|ACF79780.1| (unknown [Zea mays]) HSP 1 Score: 63.5438 bits (153), Expect = 2.477e-7 Identity = 54/197 (27.41%), Postives = 96/197 (48.73%), Query Frame = 0
Query: 232 MRPQDEKQFQGLSQDQQKVVVSEAIRYIFFKAARRE--PVHRQKLHDEVVKKY-GKALVRPVLKAAAEQLESIFGYTL-----VTPPAYRFPR------DADQESYYLITSIRSHSLSKAMNAYGKDVA---YRGFCMLVMGLVFCAQNKIPEQVLFKQLQEAQDGLELVSKSQAGGGGARGGMRFTVPWTGNDGLR 411
M DE +S++++ +V+E +RY+ FK + P+ R++L + K Y +AL V+ A E+L + FGY + PA R R +AD +SY L++ + SK Y +D A GF V+G++ A K+PE+ L+ QL+ GL ++ G + ++++ + +G+R
Sbjct: 1 MATSDELAQIDISKEEKDKLVAEVMRYVLFKTHQSSDCPIKREELTGIITKNYRQRALPTLVINEAKERLAATFGYEMRELQRTRAPATRSGRPAQRQFNADAKSYVLVSMLDPEVYSK----YVEDKAAAHLSGFAFAVIGIIHLAGGKMPEEDLWHQLKRV--GLNETDEAHLVLGNNKQETKYSLVYMIEEGVR 191
BLAST of EWM28489.1 vs. NCBI_GenBank
Match: gi|1044530483|ref|XP_017409869.1| (PREDICTED: melanoma-associated antigen D1 [Vigna angularis] >gi|920682412|gb|KOM29184.1| hypothetical protein LR48_Vigan635s010900 [Vigna angularis]) HSP 1 Score: 61.2326 bits (147), Expect = 4.115e-7 Identity = 48/153 (31.37%), Postives = 76/153 (49.67%), Query Frame = 0
Query: 235 QDEKQFQGLSQDQQKVVVSEAIRYIFFKAARRE--PVHRQKLHDEVVKKYG-KALVRPVLKAAAEQLESIFGYTL-----VTPPAYRFPR-----DADQESYYLITSIRSHSLSKAMNAYGKDVAYRGFCMLVMGLVFCAQNKIPEQVLFKQL 374
+D QF G+S++++ +V E IRY+ FK P+ R++L V K Y ++L V+ A ++L S+FGY + P + R AD +SY LI+ + K + K GF +V+ +V A KIPE +L+ QL
Sbjct: 6 EDFAQF-GISKEEKDKLVGEVIRYVLFKTHHTSGCPIKREELTQVVTKNYHQRSLPAFVINEAKDKLSSVFGYEMKELQRAQPSSKAQTRASQQSGADPKSYILISQLPPDVYEKYV-VDAKTAHLSGFTFVVISIVHLAGGKIPEDILWSQL 156
BLAST of EWM28489.1 vs. NCBI_GenBank
Match: gi|194698120|gb|ACF83144.1| (unknown [Zea mays] >gi|195627424|gb|ACG35542.1| MAGE [Zea mays] >gi|1142852890|gb|ONM51374.1| hypothetical protein ZEAMMB73_Zm00001d018804 [Zea mays]) HSP 1 Score: 60.4622 bits (145), Expect = 8.549e-7 Identity = 49/161 (30.43%), Postives = 81/161 (50.31%), Query Frame = 0
Query: 232 MRPQDEKQFQGLSQDQQKVVVSEAIRYIFFKAARRE--PVHRQKLHDEVVKKY-GKALVRPVLKAAAEQLESIFGYTL-----VTPPAYRFPR------DADQESYYLITSIRSHSLSKAMNAYGKDVA---YRGFCMLVMGLVFCAQNKIPEQVLFKQLQ 375
M DE +S++++ +V+E +RY+ FK + P+ R++L + K Y +AL V+ A E+L + FGY + PA R R +AD +SY L++ + SK Y +D A GF V+G++ A K+PE+ L+ QL+
Sbjct: 1 MATSDELAQIDISKEEKDKLVAEVMRYVLFKTHQSSDCPIKREELTGIITKNYRQRALPTLVINEAKERLAATFGYEMRELQRTRAPATRSGRPAQRQFNADAKSYVLVSMLDPEVYSK----YVEDKAAAHLSGFAFAVIGIIHLAGGKMPEEDLWHQLK 157 The following BLAST results are available for this feature:
BLAST of EWM28489.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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