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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100009g5.631.mrna |
| Orig protein id | gnl|cribi|Naga_100009g5.631 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:1007139..1014132 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2153 ID=rna2153|Name=rna2153|organism=Nannochloropsis gaditana|type=mRNA|length=1400bp
TGCCGTGTCGAGGTTAAAGGAACGGATAAACAACCGAGACCAAGCGAAGA
GCGATATGCGTGCTTAAGGAAAGGCAATACCGCGATAGCCCCGTCTTGAG
CAATTCATCAAAAACTGAGTCCAAACAACACAGATCGCAATCCGCATGCA
ACATTGTCGAGGCAGTAGTAATGGCAAGAAAAGAGGAGGATACTAGCGCG
AGACGAACGACGCAAGATTTCAGTCTCCCTCTTCTCGTACTGCTACTCAG
CCGGCTCCCCCTCGCGTGCACGTTTAGCACTCCCACAAGCAGCAGCGCCA
TCGGCATAAATCATGGCGATGTGCTAAAAACTCTAAATAATGCCGCCACT
ATCCCCCTGATCGATCGAGTCCCGACTTTTCGGTTTTATCAAGGTGGTGT
GTGCCAACTGCAGCTATCAGGGCGAGGCGGCTTAGCCGAGTGCCGGGCCC
GCCTGCATGTGGCGATCTCTACCCTGCTTAACAACAAAACATCGTCCAAA
CAAACGGAACGTGAAGAAATTCACCATGAAGAGAACGGAGTCTCTCAAAG
ATGTTTAGTGGCTGATATCGTGGAAATCGAGTCACTTGAGATGTTGGAGG
GTATGCTTGAAAAGCAGCGAGTGCAGCAAAGTAGTACGGCGCAGAGTGTT
TCATGTGGTAGCAATTTGAATGATGACGTGTTACTAGTCAAGTTCTATGG
CAGATCTTGCAAGCAGTGCGTGGAACTCGGGCCTTTGTATGATACGCTGC
CCTTCGTCTACAGGGACAAGAGCCTGAGATTCGGACGAGCAGACGTCACA
AACTTTCCCACACTTGTTGTTCCTCCACCACCACCCCAAAATTTTGCCAG
TTTGGATCGAAGTCAAAACATTGAAGATCGTCTGGAGGGCTGCCCGCGCT
GTGGGGGCGGGGGCTTCGTCGTTTGTACAGAATGTAATGGACAGGGACAC
CTGATACGAAGTGTAGACGGGCACACGGTTGCAGACGTGTGTATGACCTG
CGTAGGTCAAAGAAAAATCCCCTGTCAACAGTGCGGCGGGAAATGTTACT
TGTGCTGATGTACAGACAGACAATGGCATTGCGAATACGTGGAGAAATAT
AGAAAAGCAGTATACGTAATGGAGAGATCACAAGAATTTTTACTCGTTAT
CACCCATAAAATCACGCACGTTTGTAAGGTTGGGCGTAAACATTAGGAAT
ACTACTAAGACGATTCTTCATGCTATCTCTGCTGTCTTGTCGAGCTTAAA
ATACTATATTACTAATATGTACGATCTATCATCACTGTAAGAATATCGTC
TGTATTTTCAACTATATATCCTCTTCGTAAGATACAAGAAAGCACCAGTA
TCGTTTTGAATCCCTACAAGACCTGTAGCTTGATCAAAATTCAGTGTTGT back to topprotein sequence of rna2153 >rna2153-protein ID=rna2153-protein|Name=rna2153|organism=Nannochloropsis gaditana|type=polypeptide|length=174bp
MEEGALVGSTARSRGRPTPLVAPSSPFSVSLLSTLVVVQPAYAEAHAAVT
TTIPVRARTVPIRCIIGLPQGRTAGVARVASASLHTGQLWNSTLQGRTGG
RVPIRRWRRPCTFLVQLVVIRRCGREGAHFRVVKCRVRGRRTATDAVPVG
SEGRVMLRYAQSIGIYAGHPLLMS back to topmRNA from alignment at CM002458.1:1007139..1014132- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2153 ID=rna2153|Name=rna2153|organism=Nannochloropsis gaditana|type=mRNA|length=6994bp|location=Sequence derived from alignment at CM002458.1:1007139..1014132- (Nannochloropsis gaditana)
GGATTTCATATCACCGAGGCATGGAAAAATTGCCCTCCACCTCCCATATC
ACCACCTGCCCGACGCCGGCGCTGAAACTCCAAATCGTCCCCGGGCGTCG
GGGAGGGAACGGGGCCCATGCGGTTCGGGCCGGTGGTAGGTTGATGCCAG
GATTGTCCACCCTCGTAACTGTCCTCGCCGTCGTAGCTTGCACCCGCACC
GGGGGGTGCGTCAAACCGTCGCTCTTCTTCTTTCCCGTTGCGGCTTGGAA
GGCTATTGCCTAGCCCCTCGGTGAGAGCAGGAGCCTCCGTGTTTTCCTCC
TCCTCCTTCGGCTCCACCCACCGTTTGTCATGAAAAGACAAAAAGGCATC
GATGAAAAGGGCGGCTGTCAGCTGGTACACGACAATGTTTGCGACCAGGT
GGAAGGCCAGAAAATACATGGCGGCCCACGGCGTCCGCGTCAGGTGCATC
CACAAATACATGATCCTGTACCAGTCGTAAGTCGTGGCGACCTGGAATAA
GGTAACTGAGGCACTCCAAAAGGAGTTGAAATTGTCCACAGAGGCCCATC
CCACCAGCTCTTGGTGAATGGCGGTCGGAATTTCGTCCCCGAATTTGGCA
AAGAGGGCCATGCCAAGGACGGCCCAGGAGTAGGAAATGAGCACGCAGAG
GGAGAAGGACGAGAGGAAGAAGGGGAGCACTCGGAAGGCACTGGAGAACT
TCCGAAAAATGGTGCAATTGGGGAAAAGGCGGACGACCCGTAGGACGAGG
AAGAGGAGACATAGGTTGGCAATTTGCTCGGACTGGTGGAGGGGTGAGTG
TGGTGGGGCCAACGCGTGGACAAGGAGTGAGATGAAGGAGGCGCCCACGA
TGAGGAGGTCGAGGACATTGGCAGGCAGGGACACGAACAACTTGGGACCG
TACGCCCAGATCTTGAGCACAAGTTCCAGCGTGAAGAGTACCACAATGGA
ATAAGAAAAACGTCGGAGGGAAAGTTTGGAGATGGATGGGCTTCCGTAGA
ATGTAAGGAAGAAGCAGGTGAGGATAAGCAGGGCCATGGAGCCCACTTCG
ACCCAGCGAGAGCCCAAAATTGCGCGAAAGCGCGCCCGCTCTCGTTGGTG
CCATTCGGACGCAGACATGCCAGGCCGGTCCAAGGTAGGGACGCATGGGT
AGTAATCGGTCAAGATGACCTCGCACACGGACAAAAATTCGCGAGGATAC
ACACGTCCAGGGTGGGAACGGGCGAGTTCCTCAAACATGTGCTCCGTGGC
CCCTGCGAATGCGTCCTTTTCGTAGCCTGTCTGAAGGTCGAAGAAGTCAG
GGCGGACGTAGCGGAGCATGGAGCGGAAGGAAGTGACATCGATCCACCCG
CGTCGCTGCGGGTCCAGACACCGAAACGTCATCAAAATGGCGAGGCGCTC
CAGGATCCGACTCTCGTAGGCTTGTCGGCGTTGGAAATTCTGGTACACCC
AGAAGACCCGAGGCAAAGCTAAGTGGGCGAGGAAGAGAACGACGATGAGG
ACGAAAGCCATGAAGAAAAAGAAGTATAGGGGCGAAGACCCTTGAGGGTT
GGCAGTGTAGGCGGGGTTCAGCAGGGCACCGAAATTTTGCGTGGTCATGA
GCACGTAGAGCGCCAGGAAGGAGTTCAAAAAATCGTCAAAATTCAGATAA
GGAATGGAGGCCGCATAATAACCAGTTTCGCTGAAGAGGATGAGGCCGAG
TAGTGAGAAAAGTCCAAGGAAAATACCTGTGCCCAGGGCGACATCCCGTA
GCTGGCCCAAAAGCCGAAGAAGAAGGCTGCTCCAGCGTTTCAGTGTCTCG
GAGAGACAGATGAGGTAGAGAGGGCGCAAGGGCCGGGAAAAGCGAGGGCT
CTCGTTGTGACTGTCCAATGCCGCGCAGATATCCGCGAAGAAGAGGATGA
CCAAGAACAAACGGAATTGACCCCATAGCTTGGCTTGTAATCCACTGCGA
CTTCCAGTGTTCTCCAATACACGCGGAGGGGCGTTCATCCCAAAGAAGGC
CCCCACGCCCAAGGCATAGATCTCTAAACACAAGTCCAAGGAGAAGAGAA
GGACAAGAACCAGTTCCAGACCGAGAAGATGCCTGGCAGTGGACGCCGCC
ATTGTAAGCGTGTGCCTGGAGATAGAGTCATGGTATTGCGCCGAGTCGGC
CAACGCCCGGGGAGGCTCCCACAGGGCCAGAAGCAAATGGACGACGGCAA
GGATTTGCATTATCCACAACCAGCCGGTGCGTTTGGAGAGGCGGTAGGCG
AATAAGTTTCCAGTGCCCCCGTTCCGCATGCGCACAGGCCGAGTGTCGAT
GGCGTCACTTAAGTACAAGGACGCGCGGGCGATGCGGTGCTCGTCAGACA
TACGTGGAAGCCGCTGGTCCAACCAATGGAGGAGGGTGCGCTTGTTGGGT
CGACGGCCAGAAGCAGAGGGCGGCCTACTCCCCTCGTTGCCCCCTCCTCC
CCTTTCTCCGTCTCCCTCCTTTCTACCCTCGTGGTCGTACAACCAGCCTA
TGCCGAAGCTCATGCGGCTGTCACGACGACTATTCCTGTACGAGCTCGCA
CCGTACCCATCCGCTGCATCATTGGTCTGCCGCAAGGACGAACGGCGGGA
GTGGCGCGAGTTGCTAGTGCTTCCTTGCACACAGGGCAATTGTGGAATTC
CACCCTCCAGGGCAGGACGGGAGGACGAGTGCCGATAAGACGCTGGCGGC
GTCCTTGCACCTTCCTCGTACAGCTCGTTGTCATTCGGCGCTGCGGGCGG
GAGGGCGCCCATTTTCGGGTCGTAAAATGTCGGGTTCGGGGGAGGCGCAC
CGCGACTGATGCTGTCCCGGTGGGGTCGGAAGGGAGAGTGATGTTGAGAT
ACGCTCAATCGATTGGGATTTACGCCGGGCATCCGTTGTTGATGTCCTGA
TTGTGCTTGTATATTCGGCTGCTGTTGAAAATGCGGCATGCTGTGGCGCG
TGCGGCAGTCTCTGCTATCATCAGCATTATGGTCAATCCCGCGACAGGGT
CGTGCACCCGCCAAGTCTACATGAGCACGACGCCCCAAGCCCTGACGGTG
GCTTCTCCGCTCCTGAGGCCCGCTAATCTCATCACAAAGTAGTTCCCGCC
GATGGTGCGACCCTGTGCTACCCCTTTGACTGCTTGACCGAGCATTCTCC
ACACCGTCCTCCTCCCTCCGCTCCCGCCGTGGACACGAGTGTACCGACTC
TGTTCCGGTGCCCGCCCTTCTGGGAGTTCCGAGACTTTCATCTTCTCCAT
TTTTATTTTCCTCCTCGGGGATATCGCCTTCCCCGCCAATTGCTCGGCGC
AAGAGCTCGTCATCGAGCTCTCTTAAGTCGTCCAGGTCCAACGTACTCAC
GTACGAATCATACCGACGCCGCCGACCTAGGGACGTCCTCCCACTCCCTG
CTCGGGGACGGATGGCCCAGACCTCAGCAGAATCTTCCTGTGGAGGGAAA
ACGCCGAAAGGATGAACCATCACGCGGGGAGGAGCTTGGGAGGGGGAGGC
CGGCATAGCGCGGCGACGGGGAGCTCGGCCATCGACGGCAGGTAGTGTCC
ATGGTCGTCCCGGGGCATGTGAGGGAGAAGTGTTGCTATTGGTTGCGTCG
CTGTGAGAACCATTCGGAGTGCTCGGTCCATCACTGGAGACAGGTAAGGA
TGATATGCAGTCATCCCCTTCACTCTCTAGGCCAGGTGTCAGGCCCTCCG
TGACTGCATGTCTCGAAGAGCCACCGCGAATGGGAACTTCGGAGTGTCCA
GCTCCATGGCTTGGCCACATGAAAAATATATTAAATAGGAAATAATCCCA
GTATTGCCAGATTTGCCCTCCTAACATAGATTGCGAGAATGTGGGTATGA
GGGCGCAGGTATCACGGATTATGATAAAGGTGATGGGCCGAGGACGAAGT
GGTCTCTACAGGCAACAAGGTGATAGGGTGACAGACTCTTTCGGCGTCGG
AACAGCAGAAAATCATGCCTGCCACATGGAAAATGTCACCTATCACATCC
CGGATGCCCGCCTCACGGAGGCACCGGGGCGGTCGGGTTTGATTGATGTG
ATTGTCCATCGCCCGCCTTCACCTTAACTGCTCTCAGGAAAGAAATTCAA
AAATTCGGGCAACGAAGTAACGGCTAACCTCCCGGCCAACCAACCCGCAG
GCCCTCCTAAGCAAGGCAAATTCGCAACATGCACCGTCTTCTATGGATCT
TTGAATTAATTTGGCGAAAATTTCCATACTGCAAGAGACACTAAATGTTC
AGGGTTCAATCTAGCCCAGATGACCTTCTCCGTGGTAAGTAAAAGCTTTA
AAATCCGCCGCAGCGCACACCCCAGCGCCCGTAGGCTCTGTCACAGATTC
CTTGGGCGGAAGCTTATGGTAGTTGCTGGGCACAAATTTGGTGTCCATTG
CATTTTTGACGCGCGGGTTAAAAGGGGGTGTAATTTTCTTCTGATAAAGC
CTTTCAAAGTCAATATCAGCGAAAAAGGCGTGTGATTTGATGCGAGCTGG
CCCAGGGCGCCGGGCGGGATTTGGCTCCAGAAGCCCAAATATCAATGACT
TTGCCGCCTTTGAGAAGTGTGCCGGAAATGTTGGCCTTACGTGAACGATG
CAATGGAACATATATTTCCTGTTGCTGTTGTAAAATGGAGTCCGACCGTC
CATCATTTCATACAGTAGAATGCCAAAACTCCACCAATCTACCGGTGCCC
CGTAAGGCTTCCCTCGCAGCAATTCTGGAGCCAAATACTCAGCTGTGCCG
CAGAATGTCGTTGCACAGGCTTGACTTCGGACATTTTGTTTCGAGAGACC
GAAATCAGTCAAGGCTATATGGCCCTCTGAGTCCATCAAAATGTTCTCGA
GCTTCAGGTCCCTGTAAATAATGAACTGCTCGTGTAGGTGTTCGAGTGCC
AGCAAAAGCTCTGCAGCGTAAAATTTGGCGCGAGATGCAGCAAAGGATCC
ATTTTTCCGTAAATGGTAGAAAAGTGACCCCCCTGTGTAGTAGTCTGTGA
CCAGGTACAAACTCGTTTGGTTCTGGAAGGCATATCGGAGACGGACAATA
AACGGGTGACGAATCTGACAGAGAATGGCTCGCTCTGACATTGTGTGCTC
AATTTGTCCCTTTTTGACTATAGTGTCCTTGTTTAACACTTTCATGGCGT
AGATTCTGCCCGCGCCATGCTCTCGGCTCTTCTTCTTCACCAGCATGACT
TTTCCGAAAGCCCCCTTTCCCACAACCTTGAGCAGGTCGAAGTCTCCAAT
CCCAAGCCTCTCTGTCAGAGCAAAAGTCCGACAATCACCACCGTCGCTGC
TCAAGGCCCTCTCTAAATCCATGCCCCCAGGTGACAAGGGGGCACCGCGC
TCGGACGAGGATGTCCGATTGAAACTCAAGCCACTGGAAACCATCCGCCG
GAGCCGACGGAGAAAAGTGCTGCTTGCTAGACGATGATCATCCTCTCGTG
CACGGGTTGGAGACGAGAGGCTGGTGGGTGCCACAGAATCCGCCAACTGG
CCAGCTGAGGACCGATCGTTTGGTGGTTGGGGTACGGGAACGCCACAATA
AGCTGCTTCGGCTACGGCGAAGAGGTGGCCTCTGTTGCTCACAGGCACCG
AGACGCGGACACTGCCGCACGTATTGCTAGACCTACCAGATTTGCTGACG
CGAGGAATAAAGGGAATGAAAAGACGGCCTTTTGGAGAGTCGCTAGAGTT
GTGGACAATCGTAGGCTTCGATGCAGGTGTTGAGGGAGAGGGTAGATTGG
GAGGTTGAGGATGCTGGAGGGCGTCCTCCAGGCAAAATTGGAAGAAACGG
AAAACGGAGTCCAAGGCTGCCACAACACTCCAGACTGTGCTGGCTGCCAC
GGCGTCCCCATGTGTTGCTGGAGTGCCCACAGAGAGCACCTGTGCCACGC
CTAAGCGTAATCGGGTCTTCGGGATGGCATGGCCGGGCGGTAGTCGGAGC
GAGGACTCCCAATCCACTGCGTATGCACCCAGAAATGCTTTCACGTCCGT
CGAATCATCCTCTTGTAAGATTTGACTGGCCTCTACCGTAGCAATACCGG
CGATACGATTTACTTCTCCACTTTGCTGCTGACACCTCACAAGCTGGCGT
TGAAGCATCTCTTTGCACAGCATCGCCCCGTTACCGTATCCAAACAAGAA
TACATGCTGTGCTTTGGAAGAAGCCACATAGTTCTCATAGACATATAAAG
CATGTTCTTCAGGAAACGATGAACCGGGAATTGCCACTTTCCCCCCGTCC
ACCGTGACTGAATTGAGGTTCGGATTGCAGATGACGACAGCGTACCCTGC
TTCGTACGCCTTCTCCAAGAATGAAAGCATGGAACCTGCCCTGAGACCTT
TGCTCACGCATGTGGAACGACTCCATATTCCCAGCTGAGAGCCTACATTG
TTTTGCAAAATGATCAAAAGCTTTGCGGCCGTCTGCCACTCGGCCGAGAC
CAATATGTCACACCTGGCCGCCGTGCCATCGTCACAAGGAGGTGGAATCC
ATTGCTGGACGAGGTTAAAACGAGCTTTAAGATACTCTTTCACATATGTT
GACAAGTTTCCAACCAAGCTTTGATATTCATCTTGCGTGCACTCAAGAGA
ACTTGCTTCCCCGTGATTTTCCTCACTGCGGCTTATTAGTCTGTCGTTGT
CCACTAAAATATATCGCGAATGAACGAATGAAGGCAGCTGCTGTTCAGAG
GTCATCGTGAACAAACTTATTGGGAGCAAAGTTTATTACAGCGTGTTACT
CGTCATTGGTTCTATTGCGTGTGTTTTGAGAAAGCATGAAATGAACATAA
GATAGAGCGCACGTCGAGGTGGAATGGGCCCGGTCACATGGCGTTGTGAG
AGGCGAGTCGGAGACAGAATAGGCAACATGAAGACTTAGTCATCAAGACA
AAATGGATCTTGACGTTGTTGTTATGACAAAGATGAACGTAGGACAGAAG
ATGAAATATCGTCGGGGAGTCAAATAGCATACAGCTGCAACCTC back to topCoding sequence (CDS) from alignment at CM002458.1:1007139..1014132- >rna2153 ID=rna2153|Name=rna2153|organism=Nannochloropsis gaditana|type=CDS|length=525bp|location=Sequence derived from alignment at CM002458.1:1007139..1014132- (Nannochloropsis gaditana)
ATGGAGGAGGGTGCGCTTGTTGGGTCGACGGCCAGAAGCAGAGGGCGGCC
TACTCCCCTCGTTGCCCCCTCCTCCCCTTTCTCCGTCTCCCTCCTTTCTA
CCCTCGTGGTCGTACAACCAGCCTATGCCGAAGCTCATGCGGCTGTCACG
ACGACTATTCCTGTACGAGCTCGCACCGTACCCATCCGCTGCATCATTGG
TCTGCCGCAAGGACGAACGGCGGGAGTGGCGCGAGTTGCTAGTGCTTCCT
TGCACACAGGGCAATTGTGGAATTCCACCCTCCAGGGCAGGACGGGAGGA
CGAGTGCCGATAAGACGCTGGCGGCGTCCTTGCACCTTCCTCGTACAGCT
CGTTGTCATTCGGCGCTGCGGGCGGGAGGGCGCCCATTTTCGGGTCGTAA
AATGTCGGGTTCGGGGGAGGCGCACCGCGACTGATGCTGTCCCGGTGGGG
TCGGAAGGGAGAGTGATGTTGAGATACGCTCAATCGATTGGGATTTACGC
CGGGCATCCGTTGTTGATGTCCTGA back to top
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