EWM28545.1, cds2134 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28545.1 vs. NCBI_GenBank
Match: gi|585110963|gb|EWM28545.1| (hypothetical protein Naga_100009g19 [Nannochloropsis gaditana]) HSP 1 Score: 894.804 bits (2311), Expect = 0.000e+0 Identity = 452/452 (100.00%), Postives = 452/452 (100.00%), Query Frame = 0 Query: 1 MSFAGFGTASQPQQNSQTPKPFSSFGAPAPASLFGTPAAASATGAFGSTNAFGSQPQQQQQQQQQQQQQQQQQQQPSLFGGFGLNASGTTTGTASRQPFGASAYGSTGSTTAGLFGTPAASSSPFGMTAGTSAQKPPTPGFFGGTSGFGGGGGGFGGMGGVGRHPGAGQGPNTVGAGAMGSMGGMPFAAPTPQQQEQQRQLQQRQFWEQELNMLREAYLPHDQPASQALQQQQPQLGMFASSLQPQQQPSRVVDYKFAFRVTDTSTGVPREVELRDRSAIEAKLKGQQEEMRRVQEHVERLGGGVKALYSQARAAKERLARCRDAHMELTNRFLAVLQRLQVLRQVNRPISQEEKQTKDRLESMLGRLEGAIRTLNEVGGVVEEDELDRREEPRQELTCDLAREDVHLLQQALEKQQGGLDFLTTALGRDCQGVELLKEKLDEVRAGRGGVV 452 MSFAGFGTASQPQQNSQTPKPFSSFGAPAPASLFGTPAAASATGAFGSTNAFGSQPQQQQQQQQQQQQQQQQQQQPSLFGGFGLNASGTTTGTASRQPFGASAYGSTGSTTAGLFGTPAASSSPFGMTAGTSAQKPPTPGFFGGTSGFGGGGGGFGGMGGVGRHPGAGQGPNTVGAGAMGSMGGMPFAAPTPQQQEQQRQLQQRQFWEQELNMLREAYLPHDQPASQALQQQQPQLGMFASSLQPQQQPSRVVDYKFAFRVTDTSTGVPREVELRDRSAIEAKLKGQQEEMRRVQEHVERLGGGVKALYSQARAAKERLARCRDAHMELTNRFLAVLQRLQVLRQVNRPISQEEKQTKDRLESMLGRLEGAIRTLNEVGGVVEEDELDRREEPRQELTCDLAREDVHLLQQALEKQQGGLDFLTTALGRDCQGVELLKEKLDEVRAGRGGVV Sbjct: 1 MSFAGFGTASQPQQNSQTPKPFSSFGAPAPASLFGTPAAASATGAFGSTNAFGSQPQQQQQQQQQQQQQQQQQQQPSLFGGFGLNASGTTTGTASRQPFGASAYGSTGSTTAGLFGTPAASSSPFGMTAGTSAQKPPTPGFFGGTSGFGGGGGGFGGMGGVGRHPGAGQGPNTVGAGAMGSMGGMPFAAPTPQQQEQQRQLQQRQFWEQELNMLREAYLPHDQPASQALQQQQPQLGMFASSLQPQQQPSRVVDYKFAFRVTDTSTGVPREVELRDRSAIEAKLKGQQEEMRRVQEHVERLGGGVKALYSQARAAKERLARCRDAHMELTNRFLAVLQRLQVLRQVNRPISQEEKQTKDRLESMLGRLEGAIRTLNEVGGVVEEDELDRREEPRQELTCDLAREDVHLLQQALEKQQGGLDFLTTALGRDCQGVELLKEKLDEVRAGRGGVV 452
BLAST of EWM28545.1 vs. NCBI_GenBank
Match: gi|553185418|ref|XP_005854248.1| (carbohydratebinding protein [Nannochloropsis gaditana CCMP526] >gi|422294814|gb|EKU22114.1| carbohydratebinding protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 891.723 bits (2303), Expect = 0.000e+0 Identity = 451/452 (99.78%), Postives = 451/452 (99.78%), Query Frame = 0 Query: 1 MSFAGFGTASQPQQNSQTPKPFSSFGAPAPASLFGTPAAASATGAFGSTNAFGSQPQQQQQQQQQQQQQQQQQQQPSLFGGFGLNASGTTTGTASRQPFGASAYGSTGSTTAGLFGTPAASSSPFGMTAGTSAQKPPTPGFFGGTSGFGGGGGGFGGMGGVGRHPGAGQGPNTVGAGAMGSMGGMPFAAPTPQQQEQQRQLQQRQFWEQELNMLREAYLPHDQPASQALQQQQPQLGMFASSLQPQQQPSRVVDYKFAFRVTDTSTGVPREVELRDRSAIEAKLKGQQEEMRRVQEHVERLGGGVKALYSQARAAKERLARCRDAHMELTNRFLAVLQRLQVLRQVNRPISQEEKQTKDRLESMLGRLEGAIRTLNEVGGVVEEDELDRREEPRQELTCDLAREDVHLLQQALEKQQGGLDFLTTALGRDCQGVELLKEKLDEVRAGRGGVV 452 MSFAGFGTASQPQQNSQTPKPFSSFGAPAPASLFGTPAAASATGAFGSTNAFGSQPQQQQQQQQQQQQQQQQQQQPSLFGGFGLNASGTTTGTASRQPFGASAYGSTGSTTAGLFGTPAASSSPFGMTAGTSAQKPPTPGFFGGTSGFGGG GGFGGMGGVGRHPGAGQGPNTVGAGAMGSMGGMPFAAPTPQQQEQQRQLQQRQFWEQELNMLREAYLPHDQPASQALQQQQPQLGMFASSLQPQQQPSRVVDYKFAFRVTDTSTGVPREVELRDRSAIEAKLKGQQEEMRRVQEHVERLGGGVKALYSQARAAKERLARCRDAHMELTNRFLAVLQRLQVLRQVNRPISQEEKQTKDRLESMLGRLEGAIRTLNEVGGVVEEDELDRREEPRQELTCDLAREDVHLLQQALEKQQGGLDFLTTALGRDCQGVELLKEKLDEVRAGRGGVV Sbjct: 1 MSFAGFGTASQPQQNSQTPKPFSSFGAPAPASLFGTPAAASATGAFGSTNAFGSQPQQQQQQQQQQQQQQQQQQQPSLFGGFGLNASGTTTGTASRQPFGASAYGSTGSTTAGLFGTPAASSSPFGMTAGTSAQKPPTPGFFGGTSGFGGGEGGFGGMGGVGRHPGAGQGPNTVGAGAMGSMGGMPFAAPTPQQQEQQRQLQQRQFWEQELNMLREAYLPHDQPASQALQQQQPQLGMFASSLQPQQQPSRVVDYKFAFRVTDTSTGVPREVELRDRSAIEAKLKGQQEEMRRVQEHVERLGGGVKALYSQARAAKERLARCRDAHMELTNRFLAVLQRLQVLRQVNRPISQEEKQTKDRLESMLGRLEGAIRTLNEVGGVVEEDELDRREEPRQELTCDLAREDVHLLQQALEKQQGGLDFLTTALGRDCQGVELLKEKLDEVRAGRGGVV 452
BLAST of EWM28545.1 vs. NCBI_GenBank
Match: gi|1173929796|gb|OQR82965.1| (carbohydrate-binding protein [Achlya hypogyna]) HSP 1 Score: 82.4185 bits (202), Expect = 2.346e-13 Identity = 40/167 (23.95%), Postives = 89/167 (53.29%), Query Frame = 0 Query: 280 IEAKLKGQQEEMRRVQEHVERLGGGVKALYSQARAAKERLARCRDAHMELTNRFLAVLQRLQVLRQVNRPISQEEKQTKDRLESMLGRLEGAIRT---LNEVGGVVEEDELDRREEPRQELTCDLAREDVHLLQQALEKQQGGLDFLTTALGRDCQGVELLKEKLDE 443 + ++K Q E + ++ E + VK + +R +LA+CR H+ L +R + ++++L+V + + +P+ EE + + L+ + G L+ + +NE+ + E ++ Q C L+ D+HL+ +++Q+ GL+ +T L +D + VE+++ L + Sbjct: 284 LSTRIKLQHEHADKFTKYAEDMVAQVKEMEKTSRDTDVKLAQCRHQHVALFHRLVQLMRKLEVFKNLRKPLHAEEVRLMETLKKVAGLLDNPTQFKARMNELMALQAMQEAKPHQDSEQ---CQLSEHDLHLVYGIMDRQRQGLEHVTKVLAQDMRDVEIMQRALAD 447
BLAST of EWM28545.1 vs. NCBI_GenBank
Match: gi|669157986|ref|XP_008614555.1| (hypothetical protein SDRG_10348 [Saprolegnia diclina VS20] >gi|530733911|gb|EQC32153.1| hypothetical protein SDRG_10348 [Saprolegnia diclina VS20]) HSP 1 Score: 76.2554 bits (186), Expect = 2.761e-11 Identity = 89/367 (24.25%), Postives = 156/367 (42.51%), Query Frame = 0 Query: 100 GASAYGSTGSTTAGLFGTPAASSSPFGMTAGTSAQKPPTPGF-FGGTSGFGGGGGGFGGMGGVGRHPGAGQGPNTVGAGA-------------------MGSMGGMPFAAPTPQQQEQQRQLQQRQFWEQELNMLREAYLPHDQPASQALQQQQPQLGMFASSLQPQQQPSRVVDYKFAFRVTDTSTGVPREVELRDRSAIEAKLKGQQEEMRRVQEHVERLGGGVKALYSQARAAKERLARCRDAHMELTNRFLAVLQRLQVLRQVNRPISQEEK---QTKDRLESMLGRLEGAIRTLNEVGGVVEEDELDRREEPRQELTCDLAREDVHLLQQALEKQQGGLDFLTTALGRDCQGVELLKEKLDE 443 GA+A ST ST+A FG+ +A ++P G+ PT F FG + G GGFG G Q A M S+ G+ A PQQ + L Q+ +R A++ ++ +QA Q+ P P+ V+ +K EL R +K QQE + + E + VK + +R +LA+CR H L +R + ++++L+V + + +P+ +E +T ++ SML +NE+ + + + P QE C L+ +D+HL+ +++Q+ GL+ +T L +D + VE++++ L + Sbjct: 125 GAAATPSTPSTSAFSFGSNSA-TAPSTGGFGSGFGSAPTSNFSFGNAAAKPSGFGGFGAAAPTAPAFGLFQLNAASSTNAFPGATNALAAATSAAANSPMESLTGIRMAYMDPQQSRFKHMLYNAVDPAQKHLYVRPAHI-SEKLWTQA-QRDNPDPA--------NCVPAAVIGFK----------------ELSTR------IKLQQEHADKFATYAEDMVTQVKEMEKTSRDTDVKLAQCRHQHAALFHRLIQLMRKLEVFKNLRKPLHADEVKLFETLKKVASMLDNPTQFKARMNELMAL--QAMQAAKPHPDQE-QCQLSDQDLHLVFGIMDRQRQGLEHVTKVLSQDMRDVEIMQKALAD 455
BLAST of EWM28545.1 vs. NCBI_GenBank
Match: gi|758368562|emb|CEP09009.1| (hypothetical protein [Parasitella parasitica]) HSP 1 Score: 72.4034 bits (176), Expect = 5.186e-10 Identity = 124/479 (25.89%), Postives = 186/479 (38.83%), Query Frame = 0 Query: 32 SLFGTPAAASATGAFGSTNAFGSQPQQQQQQQQQQQQQQQQQQQPSLFGGF-GLNASGTTTGTASRQPFGASAYGSTGSTTAGLFGTPAASSS-PFGMTAGTSAQKPPTPGFFGGTSGFGGGG--------GGFG---------GMGGVGRHPGA------------GQGPNTVGAGAMGSMGGMPFAAPTPQQ--------------QEQQRQL---QQRQFWEQELNMLREAYLPHDQPASQALQQQQPQLGMFASS-----LQPQQQPSRVVDYKFAFRVTDTSTGVPREVELRDRSAIEAKLKGQQEEMR--RVQEHVERLGGGVKALYSQARAAKERLARCRDAHMELTNRFLAVLQRLQVLRQVNRPISQEEKQTKDRL----------ESMLGRLEGAIRTLNEVGGVVEEDELDRREEPRQELTCDLAREDVHLLQQALEKQQGGLDFLTTALGRDCQGVELLKEKLDEVR 445 S FG+ A S TG FG FG+ P S GGF G A+ T+ T+ FG + ST S G TPA S++ FG TS SGFGG G GGFG GG+G P A G +T A GS G PQQ Q+QQ + Q + W Q ++R H P S Q + M + ++PQ Q ++ + + + D +T VP D +++ +Q+E+ +++E ERL VK Y K L + H + R L +L+ QVLR N P+S +E+ + +RL E M +L L E+ EDE+ R ++ C + +D+ + + LE +Q G+ ++ L D + ++L++ L E R Sbjct: 61 SSFGSTPATSTTGGFGGFGGFGAAPAT------------------STAGGFSGFGATPATSTTSGLSGFGTAPATSTASGFGGFGTTPATSNAGGFGTAPATST-----------ASGFGGFGTTPATSNAGGFGTAPATSTAASFGGLGATPAASTFGTSTATSSGGFSASTAAKPAFGSFGNNTLFGAKPQQPAFGSQQTQTGFGNQQQQSGIPPPVQEKVW-QNFALIRA----HFDPTSPLCQFRHYFYNMVPPNEVHLYVRPQNQDEQLWN-EAQRKNPDPTTMVPVLAVGFDDILKRMEIQSKQQELHQAKLRETAERL-ASVKIHYESQTLVK--LEEHKRRHRDFAQRLLRLLRYSQVLRYKNLPLSADEENSMERLNRLNNLQDRPEVMNQKLMVVWNKLQEIKARRTEDEIRRGSS---KVWCAVNDDDLDSIGKVLEAEQKGIQYVADVLKYDTKELDLIESALKERR 498
BLAST of EWM28545.1 vs. NCBI_GenBank
Match: gi|698808056|ref|XP_009837057.1| (hypothetical protein H257_11738 [Aphanomyces astaci] >gi|574108122|gb|ETV73631.1| hypothetical protein H257_11738 [Aphanomyces astaci]) HSP 1 Score: 70.4774 bits (171), Expect = 2.162e-9 Identity = 40/177 (22.60%), Postives = 87/177 (49.15%), Query Frame = 0 Query: 280 IEAKLKGQQEEMRRVQ---EHVERLGGGVKALYSQ-------ARAAKERLARCRDAHMELTNRFLAVLQRLQVLRQVNRPISQEEKQTKDRLESMLGRLEGAIRTLNEVGGVVEEDELDRREEPRQELTCDLAREDVHLLQQALEKQQGGLDFLTTALGRDCQGVELLKEKLDEVRA 446 + A + G +E R+Q H+++ G K L +Q +R +L +CR H+ L +R + ++++L++ +Q+ +P+ E L+ + L+ + + ++ + +Q L ED+ + + L+KQ+ GL+ LT L +D + V+++K+ L++ A Sbjct: 279 VPAAVVGFKELSTRIQLQQAHIKKFHGYAKDLVAQVQDMEKASRHTDVKLTQCRQQHIALFHRLVQLMRKLELFKQLRKPLHPSEHHLAATLKHVQSLLDNPTQFKAHMHELMTLQSMQAALPNQQRPDAQLTDEDMATVFRVLDKQREGLEHLTRILNQDLRDVQIMKKALEDDSA 455
BLAST of EWM28545.1 vs. NCBI_GenBank
Match: gi|1210520091|dbj|GAX20974.1| (hypothetical protein FisN_1Lh360 [Fistulifera solaris]) HSP 1 Score: 67.0106 bits (162), Expect = 2.070e-8 Identity = 114/465 (24.52%), Postives = 178/465 (38.28%), Query Frame = 0 Query: 17 QTPKPFSSFGAPAPASLFGTPAAASATGAFGS---TNAFGSQPQQQQQQQQQQQQQQQQQQQPSLFGGFGLNASGTTTGTASRQPFGASAYGSTGSTTAGLFGTPAASSSPFGM----TAGTSAQKPPTPGFFGGTSGFGGGGGGFGGMGGVGRHP----GAGQGPNTVGAGAMGSMGGMPFAAPT-PQQQEQQRQL-----QQRQFWEQELNMLREAY-----------------LPHDQPASQALQQQQPQLGM-----FASSLQPQQQPSRVVDYKFAFRV-TDTSTGVPREVELRDRSAIEAKLKGQQEEMRRVQEHVERLGGGVKALYSQARAAKERLARCRDAHMELTNRFLAVLQRLQVLRQVNRPISQEEKQTKDRLESMLGRLEGAIRTLNEVGGVVEEDELDRREEPRQELTCDLAREDVHLLQQALEKQQGGLDFLTTALGRDCQGVELLKEKL 441 ++P P ++FG+PAP++ FG PAA+S G FGS + AFG P +++G P S +GST S+ G FG PA S FG + G P + FG T GG FG P A GA + PT PQQ QQ L Q+ + L L AY L H S ++Q Q G+ P+ D+ A TD +P V + A++A+++GQQE+ + + + + + + A RL L R LAV+++++VLR P+ Q E + +L + ++ I+ + + E R P Q T L D+ L+ L K + L +TTA+ +D +EL+++++ Sbjct: 15 RSPAPTTTFGSPAPSTNFGAPAASS--GLFGSASPSTAFGGTP--------------------------------SSSGIFGSAPSSGSLFGSTPSS--GTFGAPAPSGGLFGSAPAPSTGLFGSAPSSGSLFGST--LAPSGGLFGNTSNTSSAPFSFSNAAPSSGLFGAPSTSGFSQQQQLPPTVPQQAAQQALLDASARQEEYRVQSALEKLNHAYQGTEIATDTKSAHFSVTLYHS--VSPEIRQMQSLQGVGLDGKPLPIAPPRPPQISADDWTRAVVCNTDHENYMP--VAVVGARALQARVQGQQEQANTCIQQLNDIQETAEVIRDRNHGANARLVEAEREQARLRKRMLAVMRKVEVLRCFGHPLQQGEVEAMHKLAEVEKQIYQNIQPV-----LQRLAENVRANAPSQPPTVALP-NDLDELKGVLTKHREALSRMTTAVQQDKGDLELIQKRV 431
BLAST of EWM28545.1 vs. NCBI_GenBank
Match: gi|1173950379|gb|OQR98346.1| (carbohydrate-binding protein [Thraustotheca clavata]) HSP 1 Score: 66.6254 bits (161), Expect = 4.002e-8 Identity = 106/477 (22.22%), Postives = 183/477 (38.36%), Query Frame = 0 Query: 2 SFAGFGTASQPQQNSQTPKPFSSFGAPAPASLFGTPAAASATGAFGSTNAFGSQPQQQQQQQQQQQQQQQQQQQPSLFG-GFGLNASGTTTGTASRQPFGASAYG------------------STGSTTAGLFGTPAASSSPFGMTAGTSAQKPPTPGFFGGTSGFGGGGGGFGGMGGVGRHPGAGQGPNTVGAGAMGSMGGMPFAAPTPQQQEQQRQLQQRQFWEQELNMLREAYLPHDQPASQALQQQQPQLGMFASSLQPQQQPSRVVDYKFAFRVT--------DTSTGVPREV----ELRDRSAIEAKLKGQQEEMRRVQEHVERLGGGVKALYSQARAAKERLARCRDAHMELTNRFLAVLQRLQVLRQVNRPISQEEKQ---TKDRLESMLGR---LEGAIRTLNEVGGVVEEDELDRREEPRQELTCDLAREDVHLLQQALEKQQGGLDFLTTALGRDCQGVELLKEKL 441 SF GFG S P ++ AT A ST +FGS P+ G FG N T+T AS P ++G +T + G FG PAA +S F G +A KP G FG T+ G +G A Q PN A+ + +P + L +R AY+ QQ MF +++ P Q+ V + ++ D + VP V EL R +K QQE + + + + VK + +R +LA+CR H+ L +R + ++++L+V + + +P+ Q+E + T ++ S+L + + L + ++++ +D +E + L+ D+ L+ + +Q+ GL+ +T L +D + VE++++ L Sbjct: 227 SFGGFGATSNP--------------------------SSQATTANSSTFSFGSAAPSSTPSSSGFSFGSTPSTTPASSGFSFGGN---TSTPAASTTPSTGFSFGGASTTPSTAPTTSFPFGNTTTAPATGGFGAPAAGTSTFSF--GNNAAKPSMFGGFGATTPAQQPASGLFQLGAATS--NAFQ-PNNSTTNALAAATSAAANSPM-----------------ESLTGIRMAYMD---------PQQSRFKHMFYNAVDPAQKHLYVRPAHISEKLWTQAQRDNPDPANCVPAPVIGFKELSTR------IKLQQEHADKFATYADDMVTQVKEMEKSSRETDVKLAQCRHQHVALFHRLIKLMRKLEVFKNLRKPLHQDEVRLFATLKKIASLLDNPTQFKARMNELMALQAMLKDKPMDEADEGK------LSDHDLQLVFGIMNRQRQGLEHVTKVLTQDLRDVEIMQKAL 631 The following BLAST results are available for this feature:
BLAST of EWM28545.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 8
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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