EWM28628.1, cds2103 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28628.1 vs. NCBI_GenBank
Match: gi|585111046|gb|EWM28628.1| (3 (2 ) -bisphosphate nucleotidase [Nannochloropsis gaditana]) HSP 1 Score: 570.081 bits (1468), Expect = 0.000e+0 Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0 Query: 1 MIIQAGAVKVLAKDVVSIAKTAGDAIMSIYAFPDTVSWDVKAKSDNSPLTAADLAANNLICASLKEKYPSIPIVSEENKMLPYEERSNWPFYWCVDPLDGTKEFLKRNGQFTVNIGLCQGKSPIFGVVHVPAMEPAKTYYGAKGHGAFVEIADEPPIPIKVKEFSEKDPNLAIVASASHNTPETENFISKYQNPTLKALGSSLKLLMVAEGEAHVYPRLAPTCEWDTCASHAVVEAAGGEVLQAEGGKACQPGLPVEYNKPDALNPFFIVYGRRRD 276 MIIQAGAVKVLAKDVVSIAKTAGDAIMSIYAFPDTVSWDVKAKSDNSPLTAADLAANNLICASLKEKYPSIPIVSEENKMLPYEERSNWPFYWCVDPLDGTKEFLKRNGQFTVNIGLCQGKSPIFGVVHVPAMEPAKTYYGAKGHGAFVEIADEPPIPIKVKEFSEKDPNLAIVASASHNTPETENFISKYQNPTLKALGSSLKLLMVAEGEAHVYPRLAPTCEWDTCASHAVVEAAGGEVLQAEGGKACQPGLPVEYNKPDALNPFFIVYGRRRD Sbjct: 1 MIIQAGAVKVLAKDVVSIAKTAGDAIMSIYAFPDTVSWDVKAKSDNSPLTAADLAANNLICASLKEKYPSIPIVSEENKMLPYEERSNWPFYWCVDPLDGTKEFLKRNGQFTVNIGLCQGKSPIFGVVHVPAMEPAKTYYGAKGHGAFVEIADEPPIPIKVKEFSEKDPNLAIVASASHNTPETENFISKYQNPTLKALGSSLKLLMVAEGEAHVYPRLAPTCEWDTCASHAVVEAAGGEVLQAEGGKACQPGLPVEYNKPDALNPFFIVYGRRRD 276
BLAST of EWM28628.1 vs. NCBI_GenBank
Match: gi|553178690|ref|XP_005852593.1| (3'(2'), 5'-bisphosphate nucleotidase [Nannochloropsis gaditana CCMP526] >gi|553188830|ref|XP_005854874.1| 3'(2'), 5'-bisphosphate nucleotidase [Nannochloropsis gaditana CCMP526] >gi|422294182|gb|EKU21482.1| 3'(2'), 5'-bisphosphate nucleotidase [Nannochloropsis gaditana CCMP526] >gi|422295939|gb|EKU23238.1| 3'(2'), 5'-bisphosphate nucleotidase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 569.311 bits (1466), Expect = 0.000e+0 Identity = 275/276 (99.64%), Postives = 276/276 (100.00%), Query Frame = 0 Query: 1 MIIQAGAVKVLAKDVVSIAKTAGDAIMSIYAFPDTVSWDVKAKSDNSPLTAADLAANNLICASLKEKYPSIPIVSEENKMLPYEERSNWPFYWCVDPLDGTKEFLKRNGQFTVNIGLCQGKSPIFGVVHVPAMEPAKTYYGAKGHGAFVEIADEPPIPIKVKEFSEKDPNLAIVASASHNTPETENFISKYQNPTLKALGSSLKLLMVAEGEAHVYPRLAPTCEWDTCASHAVVEAAGGEVLQAEGGKACQPGLPVEYNKPDALNPFFIVYGRRRD 276 MIIQAGAVKVLAKDVVSIAKTAGDAIMSIYAFPDTVSWDVKAKSDNSPLTAADLAANNLICASLKEKYPSIPIVSEENKMLPYEERSNWPFYWCVDPLDGTKEFLKRNGQFTVNIGLCQGKSPIFGVVHVPAMEPAKTYYGAKGHGAFVEIADEPPIPIKVKEFSEKDPNLA+VASASHNTPETENFISKYQNPTLKALGSSLKLLMVAEGEAHVYPRLAPTCEWDTCASHAVVEAAGGEVLQAEGGKACQPGLPVEYNKPDALNPFFIVYGRRRD Sbjct: 1 MIIQAGAVKVLAKDVVSIAKTAGDAIMSIYAFPDTVSWDVKAKSDNSPLTAADLAANNLICASLKEKYPSIPIVSEENKMLPYEERSNWPFYWCVDPLDGTKEFLKRNGQFTVNIGLCQGKSPIFGVVHVPAMEPAKTYYGAKGHGAFVEIADEPPIPIKVKEFSEKDPNLAVVASASHNTPETENFISKYQNPTLKALGSSLKLLMVAEGEAHVYPRLAPTCEWDTCASHAVVEAAGGEVLQAEGGKACQPGLPVEYNKPDALNPFFIVYGRRRD 276
BLAST of EWM28628.1 vs. NCBI_GenBank
Match: gi|873236592|emb|CEL98606.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 341.658 bits (875), Expect = 2.315e-113 Identity = 168/276 (60.87%), Postives = 207/276 (75.00%), Query Frame = 0 Query: 1 MIIQAGAVKVLAKDVVSIAKTAGDAIMSIYAFPDTVSWDVKAKSDNSPLTAADLAANNLICASLKEKYPSIPIVSEENKMLPYEERSNWPFYWCVDPLDGTKEFLKRNGQFTVNIGLCQGKSPIFGVVHVPAMEPAKTYYGAKGHGAFVEIADEPPIPIKVKEFSEKDPNLAIVASASHNTPETENFISKYQNPTLKALGSSLKLLMVAEGEAHVYPRLAPTCEWDTCASHAVVEAAGGEVLQAEGGKACQPGLPVEYNKPDALNPFFIVYGRRRD 276 M +Q G+ V ++V IAK AG AIM+IY + W+V+ KSD+SPLTAAD AN +IC +L YP++PIVSEEN+ L YEER NW +Y+CVDPLDGTKEF+KRNGQFTVNIG+C+G +PI GVV +PA A Y+ A+G GA+ E DE I+ FS+ D L IVAS SHNTPET+ FISKY+NPTL +LGSS+KL++VAEG AHVYPRLAPTCEWDTCA+HA+V AGG V+QA GG C+ G PV YNK + LNPFF+VYG + D Sbjct: 141 MKVQCGSTLVDVLEIVKIAKRAGAAIMAIYEG-EKDKWEVEMKSDSSPLTAADREANKVICEALATLYPNVPIVSEENEKLAYEERKNWEYYFCVDPLDGTKEFIKRNGQFTVNIGICKGPTPIAGVVTIPAQGIA--YWAAEGLGAYKEENDEVR-KIQAATFSKADEGLTIVASRSHNTPETQEFISKYKNPTLISLGSSIKLMLVAEGTAHVYPRLAPTCEWDTCAAHAIVNEAGGRVVQATGGSPCEEGEPVRYNKENTLNPFFVVYGNQTD 412
BLAST of EWM28628.1 vs. NCBI_GenBank
Match: gi|676377671|ref|XP_009032114.1| (hypothetical protein AURANDRAFT_5667, partial [Aureococcus anophagefferens] >gi|323456960|gb|EGB12826.1| hypothetical protein AURANDRAFT_5667, partial [Aureococcus anophagefferens]) HSP 1 Score: 317.39 bits (812), Expect = 7.373e-106 Identity = 162/265 (61.13%), Postives = 188/265 (70.94%), Query Frame = 0 Query: 14 DVVSIAKTAGDAIMSIYAFPDTVSWDVKA--KSDNSPLTAADLAANNLICASLKEKYPSIPIVSEENKMLPYEERSNWPFYWCVDPLDGTKEFLKRNGQFTVNIGLCQGKSPIFGVVHVPAMEPAKTYY-GAKGHGAFVEIADEPP-----IPIKVKEFSEKDPNLAIVASASHNTPETENFISKYQNPTLKALGSSLKLLMVAEGEAHVYPRLAPTCEWDTCASHAVVEAAGGEVLQAEGGKACQPGLPVEYNKPDALNPFFIV 270 DV +IAK AGDAIM IY W A K+D SPLT AD AN +IC +L YP IPI+SEENK+LPY ER W ++WCVDPLDGTKEF+KRNGQFTVNIGL +G SP+ GVV+VPA E Y G KG G V D+P I K F EKD L +VASASHNTPET+ +Y++ L++ GSSLKLLMVAEG AH+YPRLAPT EWDTCA+ A+VE AGGEVLQ GGK C+PG PV YNKP+ALNPFF+V Sbjct: 4 DVAAIAKKAGDAIMEIYTKTPLDEWKAIADFKADGSPLTKADTTANTIICDALTAAYPKIPIMSEENKLLPYAERKGWAYFWCVDPLDGTKEFIKRNGQFTVNIGLVKGTSPLAGVVYVPAAEDGPVMYKGVKGLGPPVREIDDPLGYDSYKSIFCKAFDEKDAGLTLVASASHNTPETDAVFYRYKDAKLQSKGSSLKLLMVAEGAAHIYPRLAPTSEWDTCAAQAIVECAGGEVLQHAGGKDCEPGKPVAYNKPEALNPFFVV 268
BLAST of EWM28628.1 vs. NCBI_GenBank
Match: gi|299116754|emb|CBN74867.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 316.235 bits (809), Expect = 1.075e-105 Identity = 160/251 (63.75%), Postives = 194/251 (77.29%), Query Frame = 0 Query: 27 MSIYAFPDTVSWDVKAKS-DNSPLTAADLAANNLICASLKEKYPSIPIVSEENKMLPYEERSNWPFYWCVDPLDGTKEFLKRNGQFTVNIGLCQGKSPIFGVVHVPAMEPAKTYYGAKGHGAFVEI-ADEPPIPIKVKEFSEKDPNLAIVASASHNTPETENFISKYQNPTLKALGSSLKLLMVAEGEAHVYPRLAPTCEWDTCASHAVVEAAGGEVLQAEGGKACQPGLPVEYNKPDALNPFFIVYGRRR 275 M +Y D WDV+ K+ DNSPLT ADLAAN +IC +L E YP IPIVSEENK+ P+EER + ++CVDPLDGTKEF+KRNGQFTVN+GLC+ P+ GVV VPA E +TY+ KG GAFVE D+ PI KEF+E+D L +VAS SH++PETE FI+KY+NP+ ++GSSLKLL+VAEG+AHVYPRLAPT EWDTCASHA+V AAGG+VLQ GGKA +PG V YNK D LNPFF+VYG R+ Sbjct: 1 MQVYT-EDAKDWDVQIKTKDNSPLTKADLAANKVICDALTECYPEIPIVSEENKLKPFEERKEYTHFFCVDPLDGTKEFIKRNGQFTVNVGLCEAGVPVLGVVGVPAAEDPRTYFAVKGEGAFVESDKDKARSPISCKEFTEEDEGLCVVASLSHSSPETEAFIAKYKNPSTTSMGSSLKLLLVAEGKAHVYPRLAPTSEWDTCASHAIVTAAGGQVLQHAGGKAGEPGEDVRYNKEDPLNPFFVVYGSRK 250
BLAST of EWM28628.1 vs. NCBI_GenBank
Match: gi|552814515|ref|XP_005844206.1| (hypothetical protein CHLNCDRAFT_27036 [Chlorella variabilis] >gi|307103847|gb|EFN52104.1| hypothetical protein CHLNCDRAFT_27036 [Chlorella variabilis]) HSP 1 Score: 278.87 bits (712), Expect = 8.494e-91 Identity = 139/257 (54.09%), Postives = 175/257 (68.09%), Query Frame = 0 Query: 18 IAKTAGDAIMSIYAFPDTVSWDVKAKSDNSPLTAADLAANNLICASLKEKYPSIPIVSEENKMLPYEERSNWPFYWCVDPLDGTKEFLKRNGQFTVNIGLCQGKSPIFGVVHVPAMEPAKTYYGAKGHGAFVEIADEPPIPIKVKEFSEKDPNLAIVASASHNTPETENFISKYQNPTLKALGSSLKLLMVAEGEAHVYPRLAPTCEWDTCASHAVVEAAGGEVLQAEGGKACQPGLPVEYNKPDALNPFFIVYGRR 274 IA+ AGDAI+ +Y ++ +W V+ K+D SPLT AD AN +IC L + P IPIVSEEN+ + Y+ R + + WCVDPLDGTK+F+KRNGQFTVNI L +G P+ GVV VP Y+ AKG GAFV+ A ++ E P L +VASASH TPET+ F+++ + P+ K LGSSLKLLMVAEG AHVYPRLAPTCEWDT A+HA+VE AGG V A PV+YNK LNPFF+VYG++ Sbjct: 19 IARAAGDAILRVY---NSETWGVERKADESPLTRADKEANAVICDGLAQIAPHIPIVSEENRQVAYDMRKGYQYSWCVDPLDGTKDFMKRNGQFTVNIALLEGGHPVLGVVAVPV--DGTVYWAAKGQGAFVQRAGHEAQQLQCAEVDLTQPGLVVVASASHLTPETQEFVAQLREPSFKQLGSSLKLLMVAEGIAHVYPRLAPTCEWDTAAAHAIVEEAGGVV-------ALTRREPVQYNKESPLNPFFVVYGQK 263
BLAST of EWM28628.1 vs. NCBI_GenBank
Match: gi|302843017|ref|XP_002953051.1| (hypothetical protein VOLCADRAFT_105764 [Volvox carteri f. nagariensis] >gi|300261762|gb|EFJ45973.1| hypothetical protein VOLCADRAFT_105764 [Volvox carteri f. nagariensis]) HSP 1 Score: 279.641 bits (714), Expect = 1.641e-90 Identity = 146/281 (51.96%), Postives = 183/281 (65.12%), Query Frame = 0 Query: 8 VKVLAKDVVSIAKTAGDAIMSIYAFPDTVSWDVKAKSDNSPLTAADLAANNLICASLKEKYPSIPIVSEENKMLPYEERSNWPFYWCVDPLDGTKEFLKRNGQFTVNIGLCQGKSPIFGVVHVPAMEPAKTYYGAKGHGAFVEIADEPPIPIKVKEFSEKDPNLAIVASASHNTPETENFISKYQNPTLKALGSSLKLLMVAEGEAHVYPRLAPTCEWDTCASHAVVEAAGGEVLQAEGGKACQPG-------------LPVEYNKPDALNPFFIVYGRRR 275 V+V +DV++ A+ AG AI+ IY + +W+V+ KSD SPLT AD AN +IC +L+ P IPI+SEENKM P+ R + +YW VDPLDGTKEFLKRNGQFTVNI L +P+ GVV VP KTY+ KG GA++ + E I+ EF +D L +VASASH ETE I + NP +GSSLKLLMVAEG+AH+YPRLAPTCEWDT A+ +V AGG VLQA GK G +PV YNK D LNP+F+V+G+RR Sbjct: 22 VEVPVEDVIATAQAAGRAILQIYN-SEASTWEVQMKSDASPLTRADREANAVICQALQNISPHIPIISEENKMTPHSVRQKFQYYWLVDPLDGTKEFLKRNGQFTVNIALMSNNTPVMGVVDVPCQ--GKTYWAVKGKGAWLRTS-EGQQRIQAAEFGFEDKGLKVVASASHLNKETEELIQLFNNPEFIQVGSSLKLLMVAEGQAHIYPRLAPTCEWDTAAADIIVREAGGVVLQA--GKQDNKGNPLQDWKEELMKEVPVVYNKEDVLNPYFVVFGKRR 296
BLAST of EWM28628.1 vs. NCBI_GenBank
Match: gi|760448689|ref|XP_011401413.1| (3'(2'),5'-bisphosphate nucleotidase CysQ [Auxenochlorella protothecoides] >gi|675355958|gb|KFM28398.1| 3'(2'),5'-bisphosphate nucleotidase CysQ [Auxenochlorella protothecoides]) HSP 1 Score: 276.559 bits (706), Expect = 4.678e-90 Identity = 138/247 (55.87%), Postives = 170/247 (68.83%), Query Frame = 0 Query: 39 DVKAKSDNSPLTAADLAANNLICASLKEKYPSIPIVSEENKMLPYEERSNWPFYWCVDPLDGTKEFLKRNGQFTVNIGLCQGKSPIFGVVHVPAMEPAKTYYGAKGHGAFV-EIADEPPIPIKVKEFSEKDPNLAIVASASHNTPETENFISKYQNPTLKALGSSLKLLMVAEGEAHVYPRLAPTCEWDTCASHAVVEAAGGEVLQA----------EGGK-ACQPGLPVEYNKPDALNPFFIVYGR 273 +V+ K+D SPLT AD AN++IC+ L + P IPIVSEEN+ + Y R N+ + WCVDPLDGTKEFLKRNGQFTVNI L QG P+ GVVHVP K Y+ G GA+ E PP + F E DP L IV SASH + ET F+ +++ P +A+GSSLKLLMVAEG AH+YPRLAPTCEWDT A+HA+VE AGG VLQA EG + A + +P+ YNKP+ALNPFF+VYG+ Sbjct: 5 EVEIKADQSPLTRADREANSIICSGLTQLAPHIPIVSEENQKVEYSTRKNYQYCWCVDPLDGTKEFLKRNGQFTVNIALLQGAKPVLGVVHVPVQ--GKVYWAVAGKGAWARESPASPPRQLHCATFRETDPGLVIVGSASHASQETAEFVGEFRAPQFRAVGSSLKLLMVAEGAAHMYPRLAPTCEWDTAAAHAIVEEAGGRVLQAGRCDSSGNALEGWRGALEQAIPLHYNKPEALNPFFVVYGK 249
BLAST of EWM28628.1 vs. NCBI_GenBank
Match: gi|159472256|ref|XP_001694267.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158276930|gb|EDP02700.1| predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 268.855 bits (686), Expect = 1.410e-86 Identity = 139/269 (51.67%), Postives = 181/269 (67.29%), Query Frame = 0 Query: 8 VKVLAKDVVSIAKTAGDAIMSIYAFPDTVSWDVKAKSDNSPLTAADLAANNLICASLKEKYPSIPIVSEENKMLPYEERSNWPFYWCVDPLDGTKEFLKRNGQFTVNIGLCQGKSPIFGVVHVPAMEPAKTYYGAKGHGAFVEIADEPPIPIKVKEFSEKDPNLAIVASASHNTPETENFISKYQNPTLKALGSSLKLLMVAEGEAHVYPRLAPTCEWDTCASHAVVEAAGG-EVLQAEGGKACQPGLPVEYNKPDALNPFFIVYGRRR 275 V++ +D+++ A+ AG AI+ IY + +W+V+ KSD SPLT AD AN +IC +L+ P IPI+SEENK+ P+ R + +YW VDPLDGTKEFLKRNGQFTVNI L G +P+ GVV VP KTY+ KG GA++ A E I+ +F+ +D L IVAS+SH ETE FI+ +Q+P L +GSSLKLLMVAEG AH+YPRLAPTCEWD A+ +V AGG E L E V YNK D LNP+F+V+G+R+ Sbjct: 24 VELQVEDIIATAQAAGRAILQIYN-SEASTWEVQMKSDASPLTRADREANAIICQALQNISPHIPIISEENKLTPHAVRQKFQYYWLVDPLDGTKEFLKRNGQFTVNIALMCGTAPVMGVVDVPCQ--GKTYWAVKGKGAWLRSA-EGQRRIQAADFAFEDKGLKIVASSSHLNKETEEFIALFQSPELVQVGSSLKLLMVAEGAAHIYPRLAPTCEWDIAAADIIVREAGGAEELVKEAA--------VVYNKEDVLNPYFVVFGKRK 280
BLAST of EWM28628.1 vs. NCBI_GenBank
Match: gi|1004148118|gb|KXZ56091.1| (hypothetical protein GPECTOR_2g973 [Gonium pectorale]) HSP 1 Score: 265.003 bits (676), Expect = 9.619e-85 Identity = 145/286 (50.70%), Postives = 179/286 (62.59%), Query Frame = 0 Query: 9 KVLAKDVVSIAKTAGDAIMSIY----AFP----DTVSWDVKAKSDNSPLTAADLAANNLICASLKEKYPSIPIVSEENKMLPYEERSNWPFYWCVDPLDGTKEFLKRNGQFTVNIGLCQGKSPIFGVVHVPAMEPAKTYYGAKGHGAFVEIADEPPIPIKVKEFSEKDPNLAIVASASHNTPETENFISKYQNPTLKALGSSLKLLMVAEGEAHVYPRLAPTCEWDTCASHAVVEAAGGEVL----QAEGGKACQ-------PGLPVEYNKPDALNPFFIVYGRRR 275 +V +DV++ A+ AG AI+ IY F + +W+V+ KSD SPLT AD AN +IC +L+ P IPIVSEENK+ + R + +YW VDPLDGTKEFLKRNGQFTVNI L +PI GVV VP KTY+ KG GA++ E I+ EF +DP L I ASASH ETE FI ++NP +GSSLKLLMVAEG AH+YPRLAPTCEWDT A+ +V AGG VL Q G Q PV YNK D LNP+F+V+G+R+ Sbjct: 25 EVPVEDVIATAQAAGRAILQIYNSEVGFATVRIEASTWEVQMKSDQSPLTRADKEANTIICQALQNINPHIPIVSEENKIASHAVRQKYQYYWLVDPLDGTKEFLKRNGQFTVNIALIANGAPIIGVVDVPCQ--GKTYWAVKGKGAWLRTG-EGQRRIQCAEFGFEDPGLKICASASHLNKETEEFIQLFKNPEFVQVGSSLKLLMVAEGAAHIYPRLAPTCEWDTAAADIIVREAGGVVLAAGNQDNKGNPLQDWKEELLKEAPVVYNKEDVLNPYFVVFGKRK 307 The following BLAST results are available for this feature:
BLAST of EWM28628.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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