EWM28563.1, cds2099 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28563.1 vs. NCBI_GenBank
Match: gi|585110981|gb|EWM28563.1| (phox domain-containing [Nannochloropsis gaditana]) HSP 1 Score: 939.873 bits (2428), Expect = 0.000e+0 Identity = 454/454 (100.00%), Postives = 454/454 (100.00%), Query Frame = 0 Query: 1 MSSSSRTPSPHPPLGEPRQHNESKEKVKSTLSHVRLTADAKSHVLSLPALSTAPSPVGGKDIEGGPMHGTTPDGMLHSVGGYGWYEEDNVSPANSGDEHGEEDGGGGDIKHVRVLSRMETLRVDVLDASMPGGTGHGGLQIDEAGGVTDECERLLPRVPICRHDSVNEEGSLGRSKSTRMDADTTTMSYSHAADGTRRQHWHRQREGEILFHLPQSNFSVMTRQFLEEAAALSGTVGGGPPGRATHCFHHRHPRVLQLHSHRSHSKRQPEVVYAALGLGGFRICQTGWGSQHAEYLVCLCINQQTFIAWRRYSAFAKFFRDIQRLYRDAADMFPVTRGAWKALERRRKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAFASPSPSTTICDGLWSCPCVREMDDQGTWGANGITHISSNEEMLLCQKVQEAGQFRGIESGCDTVAREEK 454 MSSSSRTPSPHPPLGEPRQHNESKEKVKSTLSHVRLTADAKSHVLSLPALSTAPSPVGGKDIEGGPMHGTTPDGMLHSVGGYGWYEEDNVSPANSGDEHGEEDGGGGDIKHVRVLSRMETLRVDVLDASMPGGTGHGGLQIDEAGGVTDECERLLPRVPICRHDSVNEEGSLGRSKSTRMDADTTTMSYSHAADGTRRQHWHRQREGEILFHLPQSNFSVMTRQFLEEAAALSGTVGGGPPGRATHCFHHRHPRVLQLHSHRSHSKRQPEVVYAALGLGGFRICQTGWGSQHAEYLVCLCINQQTFIAWRRYSAFAKFFRDIQRLYRDAADMFPVTRGAWKALERRRKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAFASPSPSTTICDGLWSCPCVREMDDQGTWGANGITHISSNEEMLLCQKVQEAGQFRGIESGCDTVAREEK Sbjct: 1 MSSSSRTPSPHPPLGEPRQHNESKEKVKSTLSHVRLTADAKSHVLSLPALSTAPSPVGGKDIEGGPMHGTTPDGMLHSVGGYGWYEEDNVSPANSGDEHGEEDGGGGDIKHVRVLSRMETLRVDVLDASMPGGTGHGGLQIDEAGGVTDECERLLPRVPICRHDSVNEEGSLGRSKSTRMDADTTTMSYSHAADGTRRQHWHRQREGEILFHLPQSNFSVMTRQFLEEAAALSGTVGGGPPGRATHCFHHRHPRVLQLHSHRSHSKRQPEVVYAALGLGGFRICQTGWGSQHAEYLVCLCINQQTFIAWRRYSAFAKFFRDIQRLYRDAADMFPVTRGAWKALERRRKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAFASPSPSTTICDGLWSCPCVREMDDQGTWGANGITHISSNEEMLLCQKVQEAGQFRGIESGCDTVAREEK 454
BLAST of EWM28563.1 vs. NCBI_GenBank
Match: gi|553184363|ref|XP_005854074.1| (hypothetical protein NGA_2005800, partial [Nannochloropsis gaditana CCMP526] >gi|422294986|gb|EKU22285.1| hypothetical protein NGA_2005800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 930.243 bits (2403), Expect = 0.000e+0 Identity = 448/454 (98.68%), Postives = 450/454 (99.12%), Query Frame = 0 Query: 1 MSSSSRTPSPHPPLGEPRQHNESKEKVKSTLSHVRLTADAKSHVLSLPALSTAPSPVGGKDIEGGPMHGTTPDGMLHSVGGYGWYEEDNVSPANSGDEHGEEDGGGGDIKHVRVLSRMETLRVDVLDASMPGGTGHGGLQIDEAGGVTDECERLLPRVPICRHDSVNEEGSLGRSKSTRMDADTTTMSYSHAADGTRRQHWHRQREGEILFHLPQSNFSVMTRQFLEEAAALSGTVGGGPPGRATHCFHHRHPRVLQLHSHRSHSKRQPEVVYAALGLGGFRICQTGWGSQHAEYLVCLCINQQTFIAWRRYSAFAKFFRDIQRLYRDAADMFPVTRGAWKALERRRKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAFASPSPSTTICDGLWSCPCVREMDDQGTWGANGITHISSNEEMLLCQKVQEAGQFRGIESGCDTVAREEK 454 MSSSSRTPSPHPPLGEPRQHNE KEKVKSTLSHVRLTADAKSHVLSLPALSTAPSPVGGKDIEGGPMHGTTPDGM HSVGGYGWYEEDNVSPANSGDEHGEEDGGGGDIKHVRVLSRMETLRVDVLDASMPGGTGHGGLQIDEAGGVTDECERLLPRVPICRHDSVNEEGSLGRSKSTRMDADTTTMSYSHAADGTRRQHWHRQREGEILFHLPQSNFSVMTRQFLEEAAALSGTVGGGPPGRATHCFHHRHPRVLQLHSHRSHSKRQPEVVYAALGLGGFRICQTGWGSQHAEYLVCLCINQQTFIAWRRYSAFAKFFRDIQR+YR+AADMFP TRGAWKALER RKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAFASPSPSTTICDGLWSCPCVREMDDQGTWGANGITHISSNEEMLLCQKVQEAGQFRGIESGCDTVAREEK Sbjct: 30 MSSSSRTPSPHPPLGEPRQHNEPKEKVKSTLSHVRLTADAKSHVLSLPALSTAPSPVGGKDIEGGPMHGTTPDGMFHSVGGYGWYEEDNVSPANSGDEHGEEDGGGGDIKHVRVLSRMETLRVDVLDASMPGGTGHGGLQIDEAGGVTDECERLLPRVPICRHDSVNEEGSLGRSKSTRMDADTTTMSYSHAADGTRRQHWHRQREGEILFHLPQSNFSVMTRQFLEEAAALSGTVGGGPPGRATHCFHHRHPRVLQLHSHRSHSKRQPEVVYAALGLGGFRICQTGWGSQHAEYLVCLCINQQTFIAWRRYSAFAKFFRDIQRVYRNAADMFPATRGAWKALERGRKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAFASPSPSTTICDGLWSCPCVREMDDQGTWGANGITHISSNEEMLLCQKVQEAGQFRGIESGCDTVAREEK 483
BLAST of EWM28563.1 vs. NCBI_GenBank
Match: gi|224013630|ref|XP_002296479.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220968831|gb|EED87175.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 75.8702 bits (185), Expect = 2.075e-11 Identity = 35/131 (26.72%), Postives = 65/131 (49.62%), Query Frame = 0 Query: 274 AALGLGGFRICQTGWGSQHAEYLVCLCIN--QQTFIAWRRYSAFAKFFRDIQRLY----------------RDAADMFPVTRGAWKALERRRKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAFA 386 ++ + +R+ ++ ++A++LV C + T W+RYS F++ R + + D ++ P +W+ L++R++W+RCL GYL+ K+ LLE FL +L E P +L F Sbjct: 231 VSISIASYRVVESKKHGKYAQFLVIFCDGNFRNTIGVWKRYSDFSELSRKVTHGHSESCAAQLNPLSVTDDNDNVEILPNAITSWRLLKKRQRWYRCLDTGYLSLKVFLLERFLHDILFESSNPQILRDFV 361
BLAST of EWM28563.1 vs. NCBI_GenBank
Match: gi|298705064|emb|CBJ28523.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 75.485 bits (184), Expect = 2.075e-11 Identity = 49/143 (34.27%), Postives = 70/143 (48.95%), Query Frame = 0 Query: 244 ATHCFHHRHPRVLQLHSHRSHSKRQPEVVYAALGLGGFRICQTGWGSQHAEYLVCLCINQQTFIAWRRYSAFAKFFRDIQRLYRDAADMFPVTRGAWKALERRRKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAFA 386 AT F + +V + R +QPE A+ +G R+ + + HAEY V + Q +W+RYS F K + ++ D D T AW +++ ++W+RCL YL K LLE FL L EVP P LLM F Sbjct: 169 ATVEFVVPNAQVTTTKTFRQGMGQQPEPY--AVSIGSTRVRRLSPFAVHAEYQVLVSTKDQVHKSWKRYSDF-KLLAEYAKI-SDLRD----TVKAWAHIQQTQRWFRCLEANYLKTKCSLLERFLAQFLFEVPTPSLLMNFV 303
BLAST of EWM28563.1 vs. NCBI_GenBank
Match: gi|698798336|ref|XP_009832197.1| (hypothetical protein H257_08109 [Aphanomyces astaci] >gi|574113124|gb|ETV78615.1| hypothetical protein H257_08109 [Aphanomyces astaci]) HSP 1 Score: 73.9442 bits (180), Expect = 8.954e-11 Identity = 42/117 (35.90%), Postives = 65/117 (55.56%), Query Frame = 0 Query: 270 EVVYAALGLGGFRICQTGWGS-QHAEYLVCLCINQQTFIAWRRYSAFAKFFRDIQRLYRDAADMFPVTRGAWKALERRRKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAF 385 +V AA+ + FRI Q+ G+ +HAEYLV + ++ WRRYS FA+ + ++ +YR FP AW+ ++ R W+ L YL K LE FL ++ E+ PD+L+ F Sbjct: 179 KVQTAAVSIPKFRIVQSRAGADRHAEYLVTFKLGREFHADWRRYSEFAEIIKKVE-VYR-----FPRAMAAWRNIDNR--WFNRLEPSYLHNKCIALEVFLRDLMYELTVPDVLIDF 287
BLAST of EWM28563.1 vs. NCBI_GenBank
Match: gi|673025672|ref|XP_008866797.1| (hypothetical protein H310_04291 [Aphanomyces invadans] >gi|574478363|gb|ETW05359.1| hypothetical protein H310_04291 [Aphanomyces invadans]) HSP 1 Score: 73.559 bits (179), Expect = 1.206e-10 Identity = 43/117 (36.75%), Postives = 64/117 (54.70%), Query Frame = 0 Query: 270 EVVYAALGLGGFRICQTGWGS-QHAEYLVCLCINQQTFIAWRRYSAFAKFFRDIQRLYRDAADMFPVTRGAWKALERRRKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAF 385 +V AA+ + FRI Q+ GS +HAEYLV + ++ WRRYS FA+ + + +YR FP AW+ ++ R W+ L YL K LE FL ++ E+ PD+L+ F Sbjct: 177 KVQTAAVSIPKFRIVQSRAGSDRHAEYLVTFKLGREFHADWRRYSEFAEIVKKVD-VYR-----FPRAMAAWRKIDNR--WFNRLEPSYLHNKCIALEVFLRDLMYELTVPDVLIDF 285
BLAST of EWM28563.1 vs. NCBI_GenBank
Match: gi|397563279|gb|EJK43738.1| (hypothetical protein THAOC_37788 [Thalassiosira oceanica]) HSP 1 Score: 73.559 bits (179), Expect = 2.771e-10 Identity = 35/120 (29.17%), Postives = 62/120 (51.67%), Query Frame = 0 Query: 283 ICQTGWGSQHAEYLVCLCIN--QQTFIAWRRYSAFAKFFRDIQRLYRDA---------------ADMFPVTRGAWKALERRRKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAF 385 + Q+ ++A+YLV C + T W+RYS F++ R + + + ++ ++ P +W+ L++R++W+RCL GYL+ K+ LLE FL +L E P +L F Sbjct: 493 LSQSKKHGKYAQYLVIFCDGNFRNTVGVWKRYSDFSQLSRKVTQGHHESCAAAINPLNVTEDRDVEILPNAITSWRLLKKRQRWYRCLDAGYLSLKVFLLERFLHDILFESSNPQILRDF 612
BLAST of EWM28563.1 vs. NCBI_GenBank
Match: gi|298712413|emb|CBJ33192.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 71.633 bits (174), Expect = 5.509e-10 Identity = 39/116 (33.62%), Postives = 58/116 (50.00%), Query Frame = 0 Query: 270 EVVYAALGLGGFRICQTGWGSQHAEYLVCLCINQQTFIAWRRYSAFAKFFRDIQRLYRDAADMFPVTRGAWKALERRRKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAF 385 ++ + + F+I QTG HAEYL+ + + T WRR+S F + + R R D F +W+ L R++W+RCL V YL K LLE FL + E P+ + F Sbjct: 250 QITSIMVHIPKFQIIQTG-SDVHAEYLIVVGLGTVTLGVWRRFSEFQRLASKLSRSRR--RDQFHNALCSWRCLRERQRWFRCLDVDYLILKTFLLERFLHDFVFESMSPNTVREF 362
BLAST of EWM28563.1 vs. NCBI_GenBank
Match: gi|1210525141|dbj|GAX16075.1| (hypothetical protein FisN_20Hh249 [Fistulifera solaris]) HSP 1 Score: 72.0182 bits (175), Expect = 7.499e-10 Identity = 36/134 (26.87%), Postives = 63/134 (47.01%), Query Frame = 0 Query: 271 VVYAALGLGGFRICQTGWGSQHAEYLVCLCIN--QQTFIAWRRYSAFAKFFRDIQRLYRDAADM-----------------FPVTRGAWKALERRRKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAF 385 +V + + +R+ ++ G ++A++LV Q T W+RY F + + + + A + P +W+ L++R++W+RCL GYL+ K+ LLE FL +L E P LL F Sbjct: 358 IVTINISIASYRVVESSNGHKYAQFLVIYRQGSIQDTVGVWKRYRDFEELAKKVTHSHEGCASVIATVSPLAVTEEPEIEHLPNAITSWRLLKKRQRWFRCLDAGYLSLKVFLLERFLHDILFESTSPKLLQEF 491
BLAST of EWM28563.1 vs. NCBI_GenBank
Match: gi|1210512073|dbj|GAX28928.1| (hypothetical protein FisN_20Lh249 [Fistulifera solaris]) HSP 1 Score: 71.633 bits (174), Expect = 8.379e-10 Identity = 36/134 (26.87%), Postives = 63/134 (47.01%), Query Frame = 0 Query: 271 VVYAALGLGGFRICQTGWGSQHAEYLVCLCIN--QQTFIAWRRYSAFAKFFRDIQRLYRDAADM-----------------FPVTRGAWKALERRRKWWRCLSVGYLAFKLGLLESFLEAVLVEVPGPDLLMAF 385 +V + + +R+ ++ G ++A++LV Q T W+RY F + + + + A + P +W+ L++R++W+RCL GYL+ K+ LLE FL +L E P LL F Sbjct: 360 IVTINISIASYRVVESSNGHKYAQFLVIYRQGSIQDTVGVWKRYRDFEELAKKVTHSHEGCASVIATVSPLAVTEEPEIEHLPNAITSWRLLKKRQRWFRCLDAGYLSLKVFLLERFLHDILFESTSPKLLQEF 493 The following BLAST results are available for this feature:
BLAST of EWM28563.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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