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Properties
Property Name | Value |
Product | amidase protein |
Orig transcript id | gnl|cribi|Naga_100009g66.660.mrna |
Orig protein id | gnl|cribi|Naga_100009g66.660 |
Gbkey | mRNA |
Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002458.1 | supercontig | CM002458.1:873670..876588 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2094 ID=rna2094|Name=rna2094|organism=Nannochloropsis gaditana|type=mRNA|length=2542bp AGCCGAGAGACGTCCGGCGGCAAGGGCTGGCTTTTTCAGAGAGAGGGTGA AAAGCATAGCTGTATAACTAGTAAGCGGGAGGCTGTGCGGTGGGCGGCGT GAAGTCGTGGTGTGAGAGCTATGAATACAAAAGAGATGATACTGTCCGCA GCGACAGGCAGCCGGAAGGAGAGCCGCTCTCCAAATGCGTGGTCCTATCA CCCATTTGTCGAATGTTCAAAGAGGCACACAGATGAGCGCAAAATCCATT GATTTAAGAAGGCACATCACTAAGCCAAGCATGTAAAGAGCAGTGGATAT TTCGTGTCACCGTCACTGCAACCGCCAACCTCCTCCCCCTCCTCAGCGGA TTGCTTCCAAGACGCCTGTCCGATAGTTGGATTTCAGACGTGGTCCAGCC TGCCCAGCACTCAACTCAGCGACAGCAGCCTAAAAAGCTTCACGCTTGAT GGAGTCTAGCACAGATCGTCAATTTCAGGCATCTTACGGCGTTTAAAAAC CCGGTCGCTCGCTTGTGGTGTCTGTATTTGTTCTCCAAAGCGAAATGCTT TTGGCAAAGGAAGCTATGTTGTGAGGTATTTTAAGGCCTTCATCCTCCCC ACACAGCACTGCTGCTCTGCAATAAGCTTCTGCGGACATGTTCTGGTGGC TCTCAACAGCAGCTGAGCGCCTGCAACGAAAAGCAAGAGCGAAACGCGCG GAATTCGAAGCCAAATGGGCACAACCTCTACCGCCTCTGGCGCCTGAGCT GGATGCGGCCAAGGAGACGAAAATTGCTTTGGAGTTATCGATCGAAGACC TCGTAGCACTCATGCAGGACGGCACTTTCTCTTCGCACGACGTGGTAAGC GTATTGGCCAAACGCGCAAGAGAGTTTGGGGGACCGGCAGGGGTCAACGC CTTGACGGACGTGCTTTTCGAGGAGGCGTTCGTCGAGGCCAGAAGAAAAG ATCGCGACCGACAACGGGGGGGGGGCGAGAGTGACGCTGTGGGGGTGCTC GAAGGAATTCCTCTGTCCGTCAAGGACCACATCGATGTCAAAGGCACCGA TTCCACCACGGGGGCCGCCTGTCGATGCTTCCGGCCCGCCAGCAAGGACG CCTTGGTGGTGGAACTATTGCGGGACGCGGGGGCCATCGTCCTGTGCAAG ACCAACGTGCCCCAATGCCTCATGCTTCCTGAAACCAGCAACAACATTTG GGGCGTCACGTCCTCACCCTGGAACCTCACACGCTCTGCGGGGGGCAGCA GCGGCGGCGAGGCTGCCTTGGTGGCGGTTCGAGGGAGCTTGGTAGGGATC GGAACGGACATCGGCGGCTCCTGTCGGGGACCCGCCCATTTCAGCGGCTG CGTCGGATTTAAGCCGACGCCCGCCCGGGTCTCGGGGAAAGGGATCGTCA TGCCCTCGAAAAGCGGAAAGATGGGCATGCAGGCGATCAGAGCGACGGCG GGGCCACTGGCCAACCGCGTGGAGGACGTGGCCTTGGTATGTCAGGCCTG GTGGGTGAATAAGATGTGGGCTCGTGACCCCTACGTGGTGCCCCTACCCT TCGACCACGCGGCCTACCGACGAGGCGTGACCAAGGAAGCGCAGCAATGG GAGCGAGGGGGGGGGGGAGAGCAGACTAGGGATGGGGGGAAGGGGAGGCA AGAAGAAGCGAGTTCGCCAGGGGGGCGGAAAATCCGATTGGGCTGGTTCT TGAGCGACGACTTTTTTGAGCCTTGCCGGGCAGGGAAACGCGCGGTTCGC GAAGCGAAGCAAGCTTTGGAGTCGACAGGAAAGTACGAGCTAGTAGAGAT GCGCTTGAGCACAGCAACCGATGGCTGGGAGGCCGTGCGCCTTTATTACA ACATCATGACGGCCGAGGGAGGCCTGCGGAGTTACATCGACGCCCTGGAA GGAGAAGCGATGATCCCGATGTATCGGAACATACGACTTGCCGCCTGCTT CCCCGATTTCTTGCGACCCCTGCTCCACACCGCCTTGTACTTGACAGGAG AGAAACGGAGACGTTTCTTGGTCAAAAATATGCGGCGTGATGGGCTGGCA ACGCGGACCTACTGGCAGTACTGCGAGGAGCTTCAGAACTATCAAGAGGC GTGGACTCGAATGATGCAAACGCAGAAACTGGATGGGTTTTTATGTCCAA GCGTGGCTTTACCTGCTTTTCCTCACGGATGGTCGTCGCATTTGGAAAGC TCGTGTTCTTACAATCTATTTTTGAACCTCCTTCACTACCCTGCTGGAGT GATACCGGTCACTCAAGTGCGGGCCGATGAAGCCGTCTATCCCATAAGCG ATCTCCCCCGCATGCAGCGGGATTCTATCGCACGAGCCGCTGCGATAGCT ATGCAAGGGAGCGAGGCCTTGCCTGTGAGCGTGCAAGTCGCATTCCCACC TTTTCAGGATGAGATGTGCCTTCACGTCATGAAGGATTTACAGGACGCTG TTGGATTCACGGCTTTACCGCCTTATGCGAAGCGATCCGTTTTCAATTAA TAAAATTTGAACAAAGTACTTAGCATTGAGCTTTCAAGTGAG back to topprotein sequence of rna2094 >rna2094-protein ID=rna2094-protein|Name=rna2094|organism=Nannochloropsis gaditana|type=polypeptide|length=620bp MFWWLSTAAERLQRKARAKRAEFEAKWAQPLPPLAPELDAAKETKIALEL SIEDLVALMQDGTFSSHDVVSVLAKRAREFGGPAGVNALTDVLFEEAFVE ARRKDRDRQRGGGESDAVGVLEGIPLSVKDHIDVKGTDSTTGAACRCFRP ASKDALVVELLRDAGAIVLCKTNVPQCLMLPETSNNIWGVTSSPWNLTRS AGGSSGGEAALVAVRGSLVGIGTDIGGSCRGPAHFSGCVGFKPTPARVSG KGIVMPSKSGKMGMQAIRATAGPLANRVEDVALVCQAWWVNKMWARDPYV VPLPFDHAAYRRGVTKEAQQWERGGGGEQTRDGGKGRQEEASSPGGRKIR LGWFLSDDFFEPCRAGKRAVREAKQALESTGKYELVEMRLSTATDGWEAV RLYYNIMTAEGGLRSYIDALEGEAMIPMYRNIRLAACFPDFLRPLLHTAL YLTGEKRRRFLVKNMRRDGLATRTYWQYCEELQNYQEAWTRMMQTQKLDG FLCPSVALPAFPHGWSSHLESSCSYNLFLNLLHYPAGVIPVTQVRADEAV YPISDLPRMQRDSIARAAAIAMQGSEALPVSVQVAFPPFQDEMCLHVMKD LQDAVGFTALPPYAKRSVFN back to topmRNA from alignment at CM002458.1:873670..876588+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2094 ID=rna2094|Name=rna2094|organism=Nannochloropsis gaditana|type=mRNA|length=2919bp|location=Sequence derived from alignment at CM002458.1:873670..876588+ (Nannochloropsis gaditana) AGCCGAGAGACGTCCGGCGGCAAGGGCTGGCTTTTTCAGAGAGAGGGTGA
AAAGCATAGCTGTATAACTAGTAAGCGGGAGGCTGTGCGGTGGGCGGCGT
GAAGTCGTGGTGTGAGAGCTATGAATACAAAAGAGATGATACTGTCCGCA
GCGACAGGCAGCCGGAAGGAGAGCCGCTCTCCAAATGCGTGGTCCTATCA
CCCATTTGTCGAATGTTCAAAGAGGCACACAGATGAGCGCAAAATCCATT
GATTTAAGAAGGCACATCACTAAGCCAAGCATGTAAAGAGCAGTGGATAT
TTCGTGTCACCGTCACTGCAAccgccaacctcctccccctcctcagcGGA
TTGCTTCCAAGACGCCTGTCCGATAGTTGGATTTCAGACGTGGTCCAGCC
TGCCCAGCACTCAACTCAGCGACAGGTACGTTGGAGCAAGGATAGTGGGC
GATATATTGCGACAGAGGGATCTTAACCTTGAAGTCGTGCCGCGACATAG
TGAGACCAGTACAACCAATCTGGGTCCCGATACACGACGTGTATGTCCTA
TTTCCCCCACAAGATTATCGAGCCTCCATTCATTCATTTCTCAGTGATCT
TTTGCATGGCCCGTGATACGTAGTTACGTACGCCGTACGTTCGACGGACC
GTGTGTCGCATAAACGGTTTTGTTACCAGACTGAGCCGCATTCAGTACGT
TGTGTCTTAAGTTAGATATGTTGTTTTCTCTAATCTATCTTACCATAGTG
GTTGAGAGATTGACCTCAAACTATCCATTTCATTTGCCTCTGTCACGTTC
AGCAGCCTAAAAAGCTTCACGCTTGATGGAGTCTAGCACAGATCGTCAAT
TTCAGGCATCTTACGGCGTTTAAAAACCCGGTCGCTCGCTTGTGGTGTCT
GTATTTGTTCTCCAAAGCGAAATGCTTTTGGCAAAGGAAGCTATGTTGTG
AGGTATTTTAaggccttcatcctccccacaCAGCACTGCTGCTCTGCAAT
AAGCTTCTGCGGACATGTTCTGGTGGCTCTCAACAGCAGCTGAGCGCCTG
CAACGAAAAGCAAGAGCGAAACGCGCGGAATTCGAAGCCAAATGGGCACA
ACCTCTACCGCCTCTGGCGCCTGAGCTGGATGCGGCCAAGGAGACGAAAA
TTGCTTTGGAGTTATCGATCGAAGACCTCGTAGCACTCATGCAGGACGGC
ACTTTCTCTTCGCACGACGTGGTAAGCGTATTGGCCAAACGCGCAAGAGA
GTTTGGGGGACCGGCAGGGGTCAACGCCTTGACGGACGTGCTTTTCGAGG
AGGCGTTCGTCGAGGCCAGAAGAAAAGATCGCGACCGacaacgggggggg
ggcgagagtGACGCTGTGGGGGTGCTCGAAGGAATTCCTCTGTCCGTCAA
GGACCACATCGATGTCAAAGGCACCGATTCCACCACGGGGGCCGCCTGTC
GATGCTTCCGGCCCGCCAGCAAGGACGCCTTGGTGGTGGAACTATTGCGG
GACGCGGGGGCCATCGTCCTGTGCAAGACCAACGTGCCCCAATGCCTCAT
GCTTCCTGAAACCAGCAACAACATTTGGGGCGTCACGTCCTCACCCTGGA
ACCTCACACGCTCTGCGGggggcagcagcggcggcgagGCTGCCTTGGTG
GCGGTTCGAGGGAGCTTGGTAGGGATCGGAACGGACATCGGCGGCTCCTG
TCGGGGACCCGCCCATTTCAGCGGCTGCGTCGGATTTAAGCCGACGCCCG
CCCGGGTCtcggggaaagggatcgTCATGCCCTCGAAAAGCGGAAAGATG
GGCATGCAGGCGATCAGAGCGACGGCGGGGCCACTGGCCAaccgcgtgga
ggacgtggccttGGTATGTCAGGCCTGGTGGGTGAATAAGATGTGGGCTC
GTGACCCCTACGTGGTGCCCCTACCCTTCGACCACGCGGCCTACCGACGA
GGCGTGACCAAGGAAGCGCAGCaatgggagcgagggggggggggagagca
gactagggatggggggaaggggaggcaagaagaagcgagTTCGCCAGGGG
GGCGGAAAATCCGATTGGGCTGGTTCTTGAGCGACGACTTTTTTGAGCCT
TGCCGGGCAGGGAAACGCGCGGTTCGCGAAGCGAAGCAAGCTTTGGAGTC
GACAGGAAAGTACGAGCTAGTAGAGATGCGCTTGAGCACAGCAACCGATG
GCTGGGAGGCCGTGCGCCTTTATTACAACATCATGACGGCCGAGGGAGGC
CTGCGGAGTTACATCGACGCcctggaaggagaagcgatGATCCCGATGTA
TCGGAACATACGACTTGCCGCCTGCTTCCCCGATTTCTTGCGACCCCTGC
TCCACACCGCCTTGTACTTGACAGGAGAGAAACGGAGACGTTTCTTGGTC
AAAAATATGCGGCGTGATGGGCTGGCAACGCGGACCTACTGGCAGTACTG
CGAGGAGCTTCAGAACTATCAAGAGGCGTGGACTCGAATGATGCAAACGC
AGAAACTGGATGGGTTTTTATGTCCAAGCGTGGCTTTACCTGCTTTTCCT
CACGGATGGTCGTCGCATTTGGAAAGCTCGTGTTCTTACAATCTATTTTT
GAACCTCCTTCACTACCCTGCTGGAGTGATACCGGTCACTCAAGTGCGGG
CCGATGAAGCCGTCTATCCCATAAGCGATCTCCCCCGCATGCAGCGGGAT
TCTATCGCACGAGCCGCTGCGATAGCTATGCAAGGGAGCGAGGCCTTGCC
TGTGAGCGTGCAAGTCGCATTCCCACCTTTTCAGGATGAGATGTGCCTTC
ACGTCATGAAGGATTTACAGGACGCTGTTGGATTCACGGCTTTACCGCCT
TATGCGAAGCGATCCGTTTTCAATTAATAAAATTTGAACAAAGTACTTAG
CATTGAGCTTTCAAGTGAG back to topCoding sequence (CDS) from alignment at CM002458.1:873670..876588+ >rna2094 ID=rna2094|Name=rna2094|organism=Nannochloropsis gaditana|type=CDS|length=1863bp|location=Sequence derived from alignment at CM002458.1:873670..876588+ (Nannochloropsis gaditana) ATGTTCTGGTGGCTCTCAACAGCAGCTGAGCGCCTGCAACGAAAAGCAAG AGCGAAACGCGCGGAATTCGAAGCCAAATGGGCACAACCTCTACCGCCTC TGGCGCCTGAGCTGGATGCGGCCAAGGAGACGAAAATTGCTTTGGAGTTA TCGATCGAAGACCTCGTAGCACTCATGCAGGACGGCACTTTCTCTTCGCA CGACGTGGTAAGCGTATTGGCCAAACGCGCAAGAGAGTTTGGGGGACCGG CAGGGGTCAACGCCTTGACGGACGTGCTTTTCGAGGAGGCGTTCGTCGAG GCCAGAAGAAAAGATCGCGACCGacaacggggggggggcgagagtGACGC TGTGGGGGTGCTCGAAGGAATTCCTCTGTCCGTCAAGGACCACATCGATG TCAAAGGCACCGATTCCACCACGGGGGCCGCCTGTCGATGCTTCCGGCCC GCCAGCAAGGACGCCTTGGTGGTGGAACTATTGCGGGACGCGGGGGCCAT CGTCCTGTGCAAGACCAACGTGCCCCAATGCCTCATGCTTCCTGAAACCA GCAACAACATTTGGGGCGTCACGTCCTCACCCTGGAACCTCACACGCTCT GCGGggggcagcagcggcggcgagGCTGCCTTGGTGGCGGTTCGAGGGAG CTTGGTAGGGATCGGAACGGACATCGGCGGCTCCTGTCGGGGACCCGCCC ATTTCAGCGGCTGCGTCGGATTTAAGCCGACGCCCGCCCGGGTCtcgggg aaagggatcgTCATGCCCTCGAAAAGCGGAAAGATGGGCATGCAGGCGAT CAGAGCGACGGCGGGGCCACTGGCCAaccgcgtggaggacgtggccttGG TATGTCAGGCCTGGTGGGTGAATAAGATGTGGGCTCGTGACCCCTACGTG GTGCCCCTACCCTTCGACCACGCGGCCTACCGACGAGGCGTGACCAAGGA AGCGCAGCaatgggagcgagggggggggggagagcagactagggatgggg ggaaggggaggcaagaagaagcgagTTCGCCAGGGGGGCGGAAAATCCGA TTGGGCTGGTTCTTGAGCGACGACTTTTTTGAGCCTTGCCGGGCAGGGAA ACGCGCGGTTCGCGAAGCGAAGCAAGCTTTGGAGTCGACAGGAAAGTACG AGCTAGTAGAGATGCGCTTGAGCACAGCAACCGATGGCTGGGAGGCCGTG CGCCTTTATTACAACATCATGACGGCCGAGGGAGGCCTGCGGAGTTACAT CGACGCcctggaaggagaagcgatGATCCCGATGTATCGGAACATACGAC TTGCCGCCTGCTTCCCCGATTTCTTGCGACCCCTGCTCCACACCGCCTTG TACTTGACAGGAGAGAAACGGAGACGTTTCTTGGTCAAAAATATGCGGCG TGATGGGCTGGCAACGCGGACCTACTGGCAGTACTGCGAGGAGCTTCAGA ACTATCAAGAGGCGTGGACTCGAATGATGCAAACGCAGAAACTGGATGGG TTTTTATGTCCAAGCGTGGCTTTACCTGCTTTTCCTCACGGATGGTCGTC GCATTTGGAAAGCTCGTGTTCTTACAATCTATTTTTGAACCTCCTTCACT ACCCTGCTGGAGTGATACCGGTCACTCAAGTGCGGGCCGATGAAGCCGTC TATCCCATAAGCGATCTCCCCCGCATGCAGCGGGATTCTATCGCACGAGC CGCTGCGATAGCTATGCAAGGGAGCGAGGCCTTGCCTGTGAGCGTGCAAG TCGCATTCCCACCTTTTCAGGATGAGATGTGCCTTCACGTCATGAAGGAT TTACAGGACGCTGTTGGATTCACGGCTTTACCGCCTTATGCGAAGCGATC CGTTTTCAATTAA back to top
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