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Properties
Property Name | Value |
Product | gpi-anchored wall transfer protein |
Orig transcript id | gnl|cribi|Naga_100009g69.629.mrna |
Orig protein id | gnl|cribi|Naga_100009g69.629 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002458.1 | supercontig | CM002458.1:866910..869354 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2090 ID=rna2090|Name=rna2090|organism=Nannochloropsis gaditana|type=mRNA|length=1351bp ACAGGTATCAGATAGGAGGGGACTCGCCCGCGTGCCTGCCTATTCGCTGG TTTCGCCTCGGTATATGTCCTCTGCACCCTAGGACGGCAAGCGCGCGGGC ATGGGCGGCTCTGACACTCATGCCAGCTATGTAAATGTACCACATCTCCT GACAGCAGAAGGAAATTGTTTAGCTACCCCACCGATCGATGGAATTTCGA AACACGTTGGCCACGCTGGAGAGCATCGAAACGAGGCTCACATGTATAGA AGCAACGCAGGATCAGCCAGAGGTCCTCGCTAGCGAAGCGGGTGCCTTAG AAGAGCTCCACTCTGATCTGACAACATCGCTGTCCCGGACCTTCGCGAAG CTGCAGAAACGCTGTCAAGAAGTGGACCCCATTACACAAAAAACTCTATA CGGAGACGCTATGAAGGCCCGAGTTGCTGAAGCATTCAGTCGCTACAGCT CCCTCTTACAACGAGTTGTGGAGTTGAAAAACGGCCCCATGGAGAAAGCC TGCCACGATGCTGAGAATGTTCGCTTAGCCGCCGAGTCCCAGGCCCGCTT GGCTCGGGAAGAAGCGGCTGCTGCGAGGGAAAGGCAGCAAGAGGAAGCAG CACGAGCACAAGCAGCTGCCAAGGCCGCCGAGACCCGTCGATTGGAAATG GAAGCAAATCAGCGAGCGTTGCTCCACCGCGAGGCAGCGCTGGCCCGTGA AAAGAAGAAGAAGGAAAGAGATGAGCGGGAGCAAGCTGCTGATCATGCAT GGGCCGAGGCGCGGGCAGAGGATGCCGCTTTGGTAGATTCAATTCTACCA GGAGCCCGAGGTGCCGAGGAGGCCTTGATAAATCTCCGGCATGCATGCGG TGGTGAGGCGACAAAGGCGTACAAGGAGGCTGTGGCGACTCTGGCCCTAT ATGTAGGTAATATAATTGCTCATCCCGAAGAAGCTGCTTTCAAGCGCATA TCTCTGGAAGGTGCGCATTTCAAGTCTAAGCTTGGCCCGTGGGGACCAGG CAGCCTGCACTGCTTAGTGGCTGCTGGTTTTCAGGTTCAACGAGAAGAGG AGGACGAGGGGGGGAAGGGTGGACAAGGGGAGGATTCAAGGACGGCGGAT GGCGCCGGCCAAGAGGGGAGCAGTCTCCGCGAGGACGGGGGATCCGGTGT AGAAGGGAAAGAAGGGGAGATAGTCTTGCCTGGGGCCCGCGTCTTGTTGA TGATCGAGCCGGACATGATGAGACATCAAGAAGAGTGGACAGTATGGTAT GAAACCTGCAAAGGAGTACGGGATTTACTACAGCAGGAAGAAGCCAGAGT AAAGCGACTTTAGAAAAAGCAACTTGACACAGACAAAATAGCAGTCTCAT C back to topprotein sequence of rna2090 >rna2090-protein ID=rna2090-protein|Name=rna2090|organism=Nannochloropsis gaditana|type=polypeptide|length=531bp MPAIQPADYKAAKEAFVSNLNGSGLYEIIKVTIPLPVALWAYTELRAFRL VYSAPTPGLLLAFCYEFAVLIFPQILAQCWPESTPWVLAGLLVIGVSCRA VVQATREPSLKSQWRHDRAVRLVSSQARNFLINYRAGVMLTSAIAILAVD FTIFPRRFGKTETFGTSLMDLGVGCFIFSSGFCSRAARLFHHHSEAAPGA AAAAGVSGVVCTGGEGSGSEAKEAQGGWSLGRGDRGGCGTPTSSKGGELF RFSKRAAMWRTTKRCIPLVLLGLGRLLARRSVDYQEHVSEYGVHWNFFLT LAVIQLATSALHTVFPHKALSPLALIVLVLYQMQLSVNGLTEYMFTAPRE GSLIAQNREGILGVIGFLCLYLIGEQIGTWTVWAMGVVGGGTKITEAEAK RALLQLVVLDAGLWGATALSCTLVQPISRRLVNMSYVLMSSAYNVMVIAL LLAVDRFASMAATSRLLFAVNRNQLAFFILANLLTGGVNLSMHTIYASPF VSWVVISSYTLVLLAMFVMLDRAFDVTLKFW back to topmRNA from alignment at CM002458.1:866910..869354+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2090 ID=rna2090|Name=rna2090|organism=Nannochloropsis gaditana|type=mRNA|length=2445bp|location=Sequence derived from alignment at CM002458.1:866910..869354+ (Nannochloropsis gaditana) ATCGTCAGCTTGCTCAGGGACGTGGTTCAAGACACAATGTACCGACGACC
GCGTTAACCTTCCTTTCAACCTGGTCATGATACTCCCTGCAGGTGACTCG
GGAAGTTGAGTCAGTAGACAGCATCATCTCCCCGTCGCTACCTCTCCCGC
GCCTTTGTCGCACGGCATGCTGCAGCCCGCTAGAGGGGAATGAGAGAGGA
ATTTCAGGTCTATCACCATCTCACCCTCTTCGCAGCAGCTGCTGCAAGAG
ACAAAGAGCTGCCATTTCAGCCGCAGCAACTGGAGTAGTGTCACTTGGGT
GCGCCAGCAAATTTGCAAATAAGAGCCTTCTACGCTACACCGCCTTGTCA
CTACGCGGTCTTTGAGGTGCGGCTGGCAAGACAAGAAAGAGCATGCCTGC
CATCCAGCCTGCCGACTACAAGGCAGCCAAAGAAGCATTTGTCTCAAATT
TGAACGGCTCCGGCTTGTATGAGATCATTAAAGTCACCATCCCCCTGCCC
GTGGCTCTTTGGGCATACACGGAATTGCGAGCCTTCCGCCTGGTCTATTC
AGCTCCTACCCCTGGACTTTTGCTTGCATTTTGCTACGAATTCGCTGTTC
TGATATTTCCTCAAATTTTAGCCCAATGTTGGCCTGAATCGACACCGTGG
GTGCTCGCGGGGCTGTTGGTCATTGGTGTGAGTTGTCGTGCCGTCGTGCA
GGCGACTCGGGAGCCGTCCTTGAAGAGCCAATGGCGCCACGACCGAGCGG
TCCGTCTCGTTTCTTCCCAAGCCCGTAATTTCCTGATAAATTACCGGGCA
GGAGTGATGTTGACCTCCGCCATTGCGATCCTGGCGGTGGACTTCACCAT
CTTCCCGCGGCGTTTCGGGAAGACGGAGACCTTTGGCACGAGCCTGATGG
ACCTGGGCGTCGGCTGTTTCATTTTTTCCAGCGGATTTTGCTCACGGGCA
GCACGACTTTTTCACCATCACAGCGAAGCGGCCCcaggggcggcggctgc
tgcgggCGTGAGCGGGGTAGTGTGCACGGGGGGTGAGGGCAGCGGGTcag
aggccaaggaggctcaAGGCGGTTGGAGTCTAGGGAGAGGCGACCGGGGG
GGATGCGGCACACCCACAAGTAGCAAGGGCGGCGAGTTATTCCGTTTCTC
CAAGCGAGCGGCAATGTGGCGGACGACCAAGCGCTGCATTCCCCTTGTTC
TCCTCGGTCTGGGCAGGCTCCTGGCGCGCCGCTCCGTCGATTACCAAGAG
CATGTGAGCGAGTATGGCGTGCACTGGAacttcttcctcactctcGCCGT
CATCCAGCTGGCGACCTCGGCACTCCACACAGTCTTTCCCCACAAGGCGC
TCTCTCCCCTGGCCCTGATCGTCCTGGTCCTCTACCAGATGCAGTTGTCG
GTGAACGGCCTGACCGAATACATGTTCACagcgccgagggaggggagcct
CATCGCACAGAATCGGGAAGGTATCTTGGGTGTGATTGGCTTTCTGTGTC
TCTACCTGATAGGGGAGCAGATCGGGACCTGGACGGTATGGGCGATGGGC
GTagtgggcggagggacaaAGATtacggaggcggaagcgaaGCGTGCTCT
GCTACAGCTCGTCGTCTTGGACGCGGGGCTCTGGGGGGCGACGGCGCTGT
CTTGCACACTGGTCCAACCGATATCCCGCCGCCTGGTTAATATGTCCTAC
GTCTTGATGTCCTCCGCCTACAACGTGATGGTGATTGCGTTACTCTTGGC
TGTGGACAGGTTTGCCTCCATGGCGGCCACGTCCCGTCTCCTGTTCGCAG
TGAACAGAAATCAGCTCGCTTTCTTCATCCTGGCAAACCTGCTCACAGGG
GGGGTGAATTTGTCCATGCACACTATTTACGCCTCACCATTCGTATCCTG
GGTGGTAATTTCCTCTTACACGTTGGTTTTACTGGCAATGTTTGTCATGC
TGGATCGGGCCTTTGACGTGACACTCAAATTTTGGTAGCGGGTCGTGCTT
ATCAACAGCAATGTAGGGCAGTGTGAGTCGAGAATTCGATATTTTTCGAA
AGCTTGTTATTTTTTATGCAGGGGTCAAGCTTTGCCCGCCGATAAATAAC
GCGAAGTACTTCCATGTGCatagggagagggaggagcagatcAAGGCATT
ACTAAATTAATCACAGCGGGTTGCTGGTTCTTTCTGTAAATAGAAGTACA
TATAATTTCTTGAGGATCGAAATATGAAGATTTCAAGAGGATGAATTATA
GTAAAAATCCCCTCAAGAAACCGGTCCAGCGGGGGAACGAAAAAcgggag
gatgatggaatgGACAAAACATATTCGGTTTTGCGATTTCTTTAGGAAAA
TTTTTATACACCTTCCTTAATGCCAAGGTCTTTTGTATTGTTGTCAGCAT
TTCTAGCAAGTTTGACGTTGAAAAAAAGTTTTGCTTCATCTCTTC back to topCoding sequence (CDS) from alignment at CM002458.1:866910..869354+ >rna2090 ID=rna2090|Name=rna2090|organism=Nannochloropsis gaditana|type=CDS|length=1596bp|location=Sequence derived from alignment at CM002458.1:866910..869354+ (Nannochloropsis gaditana) ATGCCTGCCATCCAGCCTGCCGACTACAAGGCAGCCAAAGAAGCATTTGT CTCAAATTTGAACGGCTCCGGCTTGTATGAGATCATTAAAGTCACCATCC CCCTGCCCGTGGCTCTTTGGGCATACACGGAATTGCGAGCCTTCCGCCTG GTCTATTCAGCTCCTACCCCTGGACTTTTGCTTGCATTTTGCTACGAATT CGCTGTTCTGATATTTCCTCAAATTTTAGCCCAATGTTGGCCTGAATCGA CACCGTGGGTGCTCGCGGGGCTGTTGGTCATTGGTGTGAGTTGTCGTGCC GTCGTGCAGGCGACTCGGGAGCCGTCCTTGAAGAGCCAATGGCGCCACGA CCGAGCGGTCCGTCTCGTTTCTTCCCAAGCCCGTAATTTCCTGATAAATT ACCGGGCAGGAGTGATGTTGACCTCCGCCATTGCGATCCTGGCGGTGGAC TTCACCATCTTCCCGCGGCGTTTCGGGAAGACGGAGACCTTTGGCACGAG CCTGATGGACCTGGGCGTCGGCTGTTTCATTTTTTCCAGCGGATTTTGCT CACGGGCAGCACGACTTTTTCACCATCACAGCGAAGCGGCCCcaggggcg gcggctgctgcgggCGTGAGCGGGGTAGTGTGCACGGGGGGTGAGGGCAG CGGGTcagaggccaaggaggctcaAGGCGGTTGGAGTCTAGGGAGAGGCG ACCGGGGGGGATGCGGCACACCCACAAGTAGCAAGGGCGGCGAGTTATTC CGTTTCTCCAAGCGAGCGGCAATGTGGCGGACGACCAAGCGCTGCATTCC CCTTGTTCTCCTCGGTCTGGGCAGGCTCCTGGCGCGCCGCTCCGTCGATT ACCAAGAGCATGTGAGCGAGTATGGCGTGCACTGGAacttcttcctcact ctcGCCGTCATCCAGCTGGCGACCTCGGCACTCCACACAGTCTTTCCCCA CAAGGCGCTCTCTCCCCTGGCCCTGATCGTCCTGGTCCTCTACCAGATGC AGTTGTCGGTGAACGGCCTGACCGAATACATGTTCACagcgccgagggag gggagcctCATCGCACAGAATCGGGAAGGTATCTTGGGTGTGATTGGCTT TCTGTGTCTCTACCTGATAGGGGAGCAGATCGGGACCTGGACGGTATGGG CGATGGGCGTagtgggcggagggacaaAGATtacggaggcggaagcgaaG CGTGCTCTGCTACAGCTCGTCGTCTTGGACGCGGGGCTCTGGGGGGCGAC GGCGCTGTCTTGCACACTGGTCCAACCGATATCCCGCCGCCTGGTTAATA TGTCCTACGTCTTGATGTCCTCCGCCTACAACGTGATGGTGATTGCGTTA CTCTTGGCTGTGGACAGGTTTGCCTCCATGGCGGCCACGTCCCGTCTCCT GTTCGCAGTGAACAGAAATCAGCTCGCTTTCTTCATCCTGGCAAACCTGC TCACAGGGGGGGTGAATTTGTCCATGCACACTATTTACGCCTCACCATTC GTATCCTGGGTGGTAATTTCCTCTTACACGTTGGTTTTACTGGCAATGTT TGTCATGCTGGATCGGGCCTTTGACGTGACACTCAAATTTTGGTAG back to top
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