EWM28543.1, cds2061 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28543.1 vs. NCBI_GenBank
Match: gi|585110961|gb|EWM28543.1| (peptidase m50 [Nannochloropsis gaditana]) HSP 1 Score: 1702.57 bits (4408), Expect = 0.000e+0 Identity = 832/832 (100.00%), Postives = 832/832 (100.00%), Query Frame = 0 Query: 1 MRLAASWEQALTQNTTSTLSGEEADFFLLSLIFPSVHHPADQHLEHPITRYRDSCGTAFMGNVGHVRRAASGPGRGRGHARAWWTAAAATLVMGSTCEIGKVWAFVPAPLRHLHGPQPPSLHRQIAASVKGGRGAWPLTANGAKGGPNCLETRTTPRIDTIRCSSLSGRSRSSRLYAVDVDESKAEDGPPPAVPAPPSPSQTNPMTEADRLQLKSQMFKLQAEKLRLEAEKEQIKMERETLLKKQKKQQDTDRLVEKLRAAQPSTTGAASAEGAAAELKAVVKTYLRTIDADSVSRIRELSAEADTPEQALAYTNLADAVIKAIEELDGRQAKEIREELAFRFKDETPPPSSSNAPFDQFSQVEAAMRNVSNPGMSSIDQLTQEMMRNNTRGFSTIYAINLPQWLPREFMRTLESFEPLLDEDVRALRTEVFKMDTFFVTDVDKTPLAVAYMGTLRKPSEEVFKDVERRLQDLEGGLKDRVQLFLFENPRPQMQEMGGMMGGGGDAENPEVMFMAVSTRVKPLPVGGGQATLSLLSLGATALNCLVYSILTFYSPADIVNKLGEAPLARLDDALPVAAGILGIQLAHDLAHNLMARTKDVKLGVPIYIPSLQVGTFGSVLRFVSFPKRRKDMFDVALAGPLTGLALSFAAFAAGMAMTQGAAPEISAQWPMLPVALFRSSLMLWQVGQALFSADVVNLPLVSQIHVHPLAVIGALGLLTQALQAMPIGRLDGGRASTSVFGRKAATFLSASLVLYQVVSGVVLGNTLQLFWGTVVIIFQNAQEMYARDEISPVDNNRRNLLLLLWAVVAVVLLPGVPWRDAGVFDDFGGFMT 832 MRLAASWEQALTQNTTSTLSGEEADFFLLSLIFPSVHHPADQHLEHPITRYRDSCGTAFMGNVGHVRRAASGPGRGRGHARAWWTAAAATLVMGSTCEIGKVWAFVPAPLRHLHGPQPPSLHRQIAASVKGGRGAWPLTANGAKGGPNCLETRTTPRIDTIRCSSLSGRSRSSRLYAVDVDESKAEDGPPPAVPAPPSPSQTNPMTEADRLQLKSQMFKLQAEKLRLEAEKEQIKMERETLLKKQKKQQDTDRLVEKLRAAQPSTTGAASAEGAAAELKAVVKTYLRTIDADSVSRIRELSAEADTPEQALAYTNLADAVIKAIEELDGRQAKEIREELAFRFKDETPPPSSSNAPFDQFSQVEAAMRNVSNPGMSSIDQLTQEMMRNNTRGFSTIYAINLPQWLPREFMRTLESFEPLLDEDVRALRTEVFKMDTFFVTDVDKTPLAVAYMGTLRKPSEEVFKDVERRLQDLEGGLKDRVQLFLFENPRPQMQEMGGMMGGGGDAENPEVMFMAVSTRVKPLPVGGGQATLSLLSLGATALNCLVYSILTFYSPADIVNKLGEAPLARLDDALPVAAGILGIQLAHDLAHNLMARTKDVKLGVPIYIPSLQVGTFGSVLRFVSFPKRRKDMFDVALAGPLTGLALSFAAFAAGMAMTQGAAPEISAQWPMLPVALFRSSLMLWQVGQALFSADVVNLPLVSQIHVHPLAVIGALGLLTQALQAMPIGRLDGGRASTSVFGRKAATFLSASLVLYQVVSGVVLGNTLQLFWGTVVIIFQNAQEMYARDEISPVDNNRRNLLLLLWAVVAVVLLPGVPWRDAGVFDDFGGFMT Sbjct: 1 MRLAASWEQALTQNTTSTLSGEEADFFLLSLIFPSVHHPADQHLEHPITRYRDSCGTAFMGNVGHVRRAASGPGRGRGHARAWWTAAAATLVMGSTCEIGKVWAFVPAPLRHLHGPQPPSLHRQIAASVKGGRGAWPLTANGAKGGPNCLETRTTPRIDTIRCSSLSGRSRSSRLYAVDVDESKAEDGPPPAVPAPPSPSQTNPMTEADRLQLKSQMFKLQAEKLRLEAEKEQIKMERETLLKKQKKQQDTDRLVEKLRAAQPSTTGAASAEGAAAELKAVVKTYLRTIDADSVSRIRELSAEADTPEQALAYTNLADAVIKAIEELDGRQAKEIREELAFRFKDETPPPSSSNAPFDQFSQVEAAMRNVSNPGMSSIDQLTQEMMRNNTRGFSTIYAINLPQWLPREFMRTLESFEPLLDEDVRALRTEVFKMDTFFVTDVDKTPLAVAYMGTLRKPSEEVFKDVERRLQDLEGGLKDRVQLFLFENPRPQMQEMGGMMGGGGDAENPEVMFMAVSTRVKPLPVGGGQATLSLLSLGATALNCLVYSILTFYSPADIVNKLGEAPLARLDDALPVAAGILGIQLAHDLAHNLMARTKDVKLGVPIYIPSLQVGTFGSVLRFVSFPKRRKDMFDVALAGPLTGLALSFAAFAAGMAMTQGAAPEISAQWPMLPVALFRSSLMLWQVGQALFSADVVNLPLVSQIHVHPLAVIGALGLLTQALQAMPIGRLDGGRASTSVFGRKAATFLSASLVLYQVVSGVVLGNTLQLFWGTVVIIFQNAQEMYARDEISPVDNNRRNLLLLLWAVVAVVLLPGVPWRDAGVFDDFGGFMT 832
BLAST of EWM28543.1 vs. NCBI_GenBank
Match: gi|299472355|emb|CBN77543.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 319.316 bits (817), Expect = 3.893e-93 Identity = 219/676 (32.40%), Postives = 344/676 (50.89%), Query Frame = 0 Query: 207 EADRLQLKSQMFKLQAEKLRLEAEKEQIKMERETLLKKQKKQQDTDRLVEKLRAAQPSTTGAASAEGAAAELKAVVKTYLRTIDADSVSRIRELSAEADTPEQALAYTNLADAVIKAIEELDGRQA----KEIREELAFRFKDE-------------TPPPSSSNAPFDQFSQVEAAMRNVSNPGMSSIDQLTQEMM--------------RNNT-RGFSTIY--AIN---LPQWLPREFMRTLESFEPLLDEDVRALRTEVFKMDTFFVTDVDKTPLAVAYMGTLRKPS----------------------EEVFKDVERRLQDLEGGLKDRVQLFLFENPRPQMQEMGGMMGGGGDAENP-EVMFMAVSTRVKPLPVGGGQATLSL----LSLGATALNCLVYSILTFYSPADIVNKLGEAPLARLDDALPVAAGILGIQLAHDLAHNLMARTKDVKLGVPIYIPSLQVGTFGSVLRFVSFPKRRKDMFDVALAGPLTGLALSFAAFAAGMAMTQGAAPEISAQWPMLPVALFRSSLMLWQVGQALFSADVVNLPLVSQIHVHPLAVIGALGLLTQALQAMPIGRLDGGRASTSVFGRKAATFLSASLVLYQVVSGVVLGNTLQLFWGTVVIIFQNAQEMYARDEISPVDNNR--RNLLLLLWAVVAVVLLPGV 816 ++++L+L ++ KLQAEKLRLE EKEQ+ ++ E L K+ + D L+ KLR G EL A+VK ++ ++AD R+ +++ E+ + +L++ V++A++ +D +A K I+E L + E +S D S + +V + M + L M +N+T G T+ A+N LP W+P ++ + S LL+ D+ ++++V M TF+VT ++K+P A Y G +R S +EVF+ V +L+ + G L DRVQLFL +P P E MG + P + + M +S KP G +S+ ++ TA Y I F + K+ E +A ALP+ G+L +Q H++ H +MA KD+++G PI+IPSLQ G FG++ +SFPK RKD FDVA AGPL G +S A F G+ MT A PE +P++P LF SSL++ + ++ +V+ L + S + +HPLA++G G++ AL MPIG LDGGR + S FGRKA L +L Q +S V +LQLFWG +VI+FQ Q++ A+DE++ V R LLL ++++ ++ P V Sbjct: 130 QSEKLRLTAEKLKLQAEKLRLEVEKEQLILQAEKLQDKEALEGKQDALIGKLR----------ELNGRDEELTALVKKEIKKVNADLFMRLADVAETTLDVEERNSLVSLSEDVMRAVDRVDKAKALKVSKGIKEILDRAEEIEKATRARAAAQALVQAQNASYGTISDNLSANKGKEGSVED--MLDLQALPSSKMQDLRNLAGMGGAGGKNSTAEGLPTVLSDAMNVMFLPLWVPTSLLKFVGSAPALLEADIETVKSDVLGMKTFYVTGMEKSPFAALYRGNMRGKSSEECSEGVKKDGAPNRRWASFHQEVFEAVTAKLESIPG-LSDRVQLFLMGDPTPLTPEQAVQMG-----DKPVDPVLMLISKEAKP---GQTSKVISISGTAITFMGTAFTAFAYGIGNFALRPEFYEKINEGDVAVAGMALPIMMGVLTLQFIHEIGHRVMAGNKDIEMGPPIFIPSLQTGLFGAITPLLSFPKNRKDYFDVASAGPLLGTFVSLAVFVVGIMMTGSATPEALEMFPLVPAGLFHSSLLVG-IMTSIGLPNVMGLAVASTVPIHPLAIVGVTGIIVNALNLMPIGSLDGGRIAMSAFGRKAGGVLGTVTLLLQAISSVFNNYSLQLFWGLLVILFQRGQDLPAKDELTEVGEGRIVTTGLLLFFSLITLIPFPEV 783
BLAST of EWM28543.1 vs. NCBI_GenBank
Match: gi|873222570|emb|CEM30972.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 251.136 bits (640), Expect = 2.330e-66 Identity = 203/663 (30.62%), Postives = 321/663 (48.42%), Query Frame = 0 Query: 202 TNPMTEADRLQLKSQMFKLQAEKLRLEAEKEQIKMERETLLKKQKKQQDTDRLVEKLRAAQPSTTGAASAEGAAAELKAVVKTYLR--TIDADSVSRIRELSAEADTPEQALAYTNLADAVIKAIEELDGRQAKEI-REELAFRF------KDE----TPPPSSSNAP------FDQFSQ-VEAAMR----NVSNPGMSSIDQLTQEMMRNNTRGFSTIYAINLPQWLPREFMRTL-----------ESFEPLLDEDVRALRTEVFKMDTFFVTDVDKTPLAVAYMGTLRKPSEEVFKDVERRLQDLEGG--LKDRVQLFL-------FENPRPQMQEMGGMMGGGGDAENPEVMFMAVSTRVKPLPVG---GGQA---TLSLLSLGATALNCLVYSILTFYSPADIVNKLGEAPLARLDDALPVAAGILGIQLAHDLAHNLMARTKDVKLGVPIYIPSLQVGTFGSVLRFVSFPKRRKDMFDVALAGPLTGLALSFAAFAAGMAMTQGAAPEISAQWPMLPVALFRSSLMLWQVGQALFSADVVNLPLVSQIHVHPLAVIGALGLLTQALQAMPIGRLDGGRASTSVFGRKAATFLSASLVLYQVVSGVVLGNTLQLFWGTVVIIFQNAQEMYARDEISPVDNNRRNLLLLLWAVVAVVLLP 814 N E R++ + Q ++A++LRLEA+ + K+E E ++++ + + ++++LR A A E A++K+ L T+ + + + + A TPE+ T L++ ++ +EE D + A++I R L R K+E P S+S +P D+ + +E AM N +N + I N + F T+ LP W P R L ++ +PL +D++ L+ EV D +F + D + AV + G+ + ++ + +R L +E LKD+V LFL FE + M ++ G P +AVS + L G G Q + L A+ + +S+ TF AD ++ L D P LAH++ H L A+ + K+ +P +IPSLQ G FG+V R +P+ +KD+FD+A+AGP GLA S F G+A+T E A WP+LP ALF +S +L + L ++ + + + VHPL V G LG + AL MPIGRLDGGRA+TS A LS L Q SG+ GN LQLFWG +V+IFQN+ E+ A+++ S VD+ RR L + + +VL+P Sbjct: 518 NNDNPEYQRMEEERQRLLMEAQRLRLEADTDAKKLEEEEKRVEEERGRRVEGVIQRLRTA------------TALEFPAIIKSSLAAGTLTEEVFQSLVDKADNAKTPEEKEELTFLSETALRLVEENDPKLAQKIQRSLLKVRLGVDPDLKEELDKLNEPLSTSGSPTSLKKGVDELREMLEGAMNITLLNDTNGAVVKI---------NTSIPFVTVPEAFLPTWFPISLSRDLNTEVSRDLSGYDNVQPLTKKDLKILKEEVLLFDEWFSSSTDTSRYAVLFRGSFKGEPSQIQQTFDRMLSRVEAHPELKDKVTLFLLPQRALPFEMMELEDATMDMILRGENKLNEP--CMIAVSKNLLSLDKGQTKGAQNRALVFQAILLAASLFSLTSFSVATFGLNADFWSRTLAGDYGALTDCFPEVGFTFLTLLAHEVGHWLAAKKSNTKISLPFFIPSLQTGAFGAVTRLRDYPRSKKDLFDLAIAGPALGLATSLIFFVVGLALTSQGTNEAIASWPVLPAALFHNSFLLGLITDFL-DKGLLAEKITTPMPVHPLVVSGFLGSIINALNFMPIGRLDGGRAATSA-LAAGAPLLSIVTQLAQAASGLFSGNELQLFWGILVVIFQNSPEVPAKNDFSQVDSARRTLFFVALFITLLVLVP 1155
BLAST of EWM28543.1 vs. NCBI_GenBank
Match: gi|544215682|ref|XP_005537986.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449018548|dbj|BAM81950.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 221.861 bits (564), Expect = 8.578e-59 Identity = 142/389 (36.50%), Postives = 212/389 (54.50%), Query Frame = 0 Query: 421 DEDVRALRTEVFKMDTFFVTDVDKTPLAVAYMGTLR--KPSEEVFKDVERRLQDLEGGLKDRVQLFLFENPRPQMQEMGGMMGGGGDAEN-----PEVMFMAVSTRVKPLPVGGGQATLSLLSLGATAL-NCLVYSILTFYSPADIVNKLGEAPLARLDDALPVAAGILGIQLAHDLAHNLMARTKDVKLGVPIYIPSLQVGTFGSVLRFVSFPKRRKDMFDVALAGPLTGLALSFAAFAAGMAMT--QGAAPEISAQW-PMLPVALFRSSLMLWQVGQALFSADVVNLPLVSQIHVHPLAVIGALGLLTQALQAMPIGRLDGGRASTSVFGRKAATFLSASLVLYQVVSGVVLGNTLQLFWGTVVIIFQNAQEMYARDEISPVDNNRR 798 D+D++ L+ +V DTF + +TP+ V G LR PSE ++ +E L + GL R++LFL E+PR ++ D P ++ M +++ +P +G Q L+ + LG TAL Y + F D ++ + + + LPV+ G +GI +AH+L H + + VK G+ IPSLQ+G +G V SFP+ R +FDVA+AGP+ GL S A AG+ +T QG+ P W P +P ALF +SL + +G+A+ ++ P I VHPL V+G GLL+QALQ +PIGR DGGR + FGR+ A +S +L Q ++ V+ + L LF+G VVI Q QE+ DE+S DN RR Sbjct: 220 DDDLKLLQEKVLTFDTFMANQITRTPIGVVIRGRLRVQNPSE-AYQRLEMALANT--GLNQRLRLFLMEDPRSPFLTDDELLVDSADESARLRSPPIIVVMPITS--EPAGIGIWQYLLASV-LGVTALFTTFGYGVGVFGLSPDFAQQIARGNIDVVSETLPVSIGAVGILVAHELGHRIAGAVRGVKQGLSFVIPSLQIGYYGCVTPLKSFPRNRSSLFDVAVAGPVAGLVSSVVALLAGLVLTVQQGSTP---LDWFPQIPSALFDASLFIGTLGKAILPQSALSQP---TIAVHPLFVVGYTGLLSQALQLLPIGRTDGGRMVQAAFGRRIAGRVSGITLLLQALASVLGNSPLLLFYGLVVIFLQREQELPCLDEVSEPDNARR 596
BLAST of EWM28543.1 vs. NCBI_GenBank
Match: gi|545706607|ref|XP_005705620.1| (peptidase, M50 family protein [Galdieria sulphuraria] >gi|452822077|gb|EME29100.1| peptidase, M50 family protein [Galdieria sulphuraria]) HSP 1 Score: 218.394 bits (555), Expect = 1.429e-57 Identity = 138/402 (34.33%), Postives = 220/402 (54.73%), Query Frame = 0 Query: 421 DEDVRALRTEVFKMDTFFVTDVDKTPLA--VAYMGTLRKPSEEVFKDVERRLQDLEGGLKDRVQLFLFENPRPQMQEMGGMMGGGGDAENPEVMFMAVSTRVKPLPVG---GGQATLSLLSLGATALNCLVYSILTFYSPADIVNKLGEAPLARLDDALPVAAGILGIQLAHDLAHNLMARTKDVKLGVPIYIPSLQVGTFGSVLRFVSFPKRRKDMFDVALAGPLTGLALSFAAFAAGMAMTQGA--APEISAQWPMLPVALFRSSLMLWQVGQALFSADVVNLPLVSQIHVHPLAVIGALGLLTQALQAMPIGRLDGGRASTSVFGRKAATFLSASLVLYQVVSGVVLGNT-LQLFWGTVVIIFQNAQEMYARDEISPVDNNRRNLLLLLWAVVAVVLLP 814 + DV+ LR VF DTF+VT +D++PL V + G LR S + + + L+ + GL RV+LFL E+P +N +F+A+ + + L V G A++ L LG + L Y + F ++KL + LP++ G + I L H++ H ++A K++KLG+P+ +PSLQ+G++G++ FPK R D FDV +AGPL G+ S F G+ ++Q + + I +P +P LFR+S+++ + + + A ++L + + VHPL V+G GLL AL +PIGRLDGGR +FGR A+ + +L Q + G VLGN+ L LFWG V++FQ ++ DE++ +N R L L+L V+ L+P Sbjct: 240 ENDVKVLRESVFGFDTFYVTHLDRSPLGDRVIFHGNLRTDSAKAVRLLNEALE--KKGLAPRVRLFLMEDP----------------LDNYRPVFIALPKQNEALMVNRTFEGIASVFLGVLGT--ITTLGYGVGVFGLTPVFLDKLKAGNTDEVYQTLPISLGAIAIVLLHEMGHRIVASMKNIKLGLPLTVPSLQIGSYGTITPLKDFPKNRSDFFDVTVAGPLVGVVTSVTLFVVGLTLSQQSLDSQTIPDWFPQVPSLLFRASMLVGSLAKII--APYLDLSH-NTVAVHPLTVVGYTGLLINALNLLPIGRLDGGRIVQCIFGRSTASRVGGITLLLQGL-GAVLGNSPLLLFWGIFVVLFQREMDLPCEDELTEPNNKRSALGLVLLFVMLFTLIP 617
BLAST of EWM28543.1 vs. NCBI_GenBank
Match: gi|546303642|ref|XP_005712081.1| (unnamed protein product [Chondrus crispus] >gi|507108452|emb|CDF32416.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 211.075 bits (536), Expect = 1.285e-55 Identity = 131/417 (31.41%), Postives = 217/417 (52.04%), Query Frame = 0 Query: 400 NLPQWLPREFMRTLESFEPLLDEDVRALRTEVFKMDTFFVTDVDKTPL--AVAYMGTLRKPSEEVFKDVERRLQDLEGGLKDRVQLFLFENPRPQMQEMGGMMGGGGDAENPEVMFMAVSTRVKPLPVGGGQATLSLLSLGATALNCLVYSILTFYSPADIVNKLGEAPLARLDDALPVAAGILGIQLAHDLAHNLMARTKDVKLGVPIYIPSLQVGTFGSVLRFVSFPKRRKDMFDVALAGPLTGLALSFAAFAAGMAMTQGAAPEISAQWPMLPVALFRSSLMLWQVGQALFSADVVNLPLVSQIHVHPLAVIGALGLLTQALQAMPIGRLDGGRASTSVFGRKAATFLSASLVLYQVVSGVVLGNTLQLFWGTVVIIFQNAQEMYARDEISPVDNNRRNLLLLLWAVVAVVLLP 814 L L EF R ES D+ +R ++ ++TFF T+VD++P V + G +R+P++++ +E + E G+ +R++LFL +P+ G D E+ + +A+ P +S+L Y I F +++ ++ + L LPV+ G + + H+ H + A +DVK+G+P +IPSLQ+GT+G++ S+P RKD+FDVA+AGPL G S +A AG+ +T +I+ +P +P ALF +S+++ + + A L + I VHPLAV+G GLL AL MPIGRLDGGR +++GR A+ +A +L Q S ++ + L LFWG V + Q + R+E+ D R + + ++ +VL+P Sbjct: 149 TLSDLLGSEFPRVSES-------DINVIRDKLCGINTFFCTEVDRSPFDERVVFRGNMRQPADKLLATLEDMAK--EEGIAERIRLFLLIDPK-----------DGPDGEDNRPVLVALPAAAMPNQTNSFSYVVSVLMGLVACATTFSYGIGIFGLTPEVITQIAKGSLDEAILTLPVSIGAIILAFMHEAGHRVAASMRDVKIGLPYFIPSLQIGTYGTITPLESYPNLRKDLFDVAVAGPLVGSVASISALIAGLLITSSG--QIADWFPQVPSALFHASILVGSLADIILPA---GLREQATIAVHPLAVVGYTGLLANALNLMPIGRLDGGRIMQALYGRAVASRATAITLLLQGFSSLLGNSPLLLFWGLVAVFLQRESDYPCRNEVLEPDGTRTAIGVGAICLMLLVLIP 540
BLAST of EWM28543.1 vs. NCBI_GenBank
Match: gi|397642257|gb|EJK75123.1| (hypothetical protein THAOC_03166 [Thalassiosira oceanica]) HSP 1 Score: 209.149 bits (531), Expect = 6.111e-54 Identity = 137/422 (32.46%), Postives = 222/422 (52.61%), Query Frame = 0 Query: 399 INLPQWLPREFMRTLESFEP--LLDEDVRALRTEVFKMDTFFVTDVDKTPLAVAYMG--TLRKPSEEVFKDVERRLQDLEGGLKDRVQLFLFENPRPQMQEMGGMMGGGGDAENPEVMFMAVSTRVKP-LPVGGGQATLSLLSLGATALNCLVYSILTFYSPADIVNKLGEAPL-ARLDDALPVAAGILGIQLAHDLAHNLMARTKDVKLGVPIYIPSLQVGTFGSVLRFVSFPKRRKDMFDVALAGPLTGLALSFAAFAAGMAMTQGAAPEISAQWPMLPVALFRSSLMLWQVGQALFSADVVNLPLVSQIHVHPLAVIGALGLLTQALQAMPIGRLDGGRASTSVFGRKAATFLSASLVLYQVVSGVVLGNTLQLFWGTVVIIFQNAQEMYARDEISPVDNNRRNLLLLLWAVVAVVLLP 814 I++P W+P + L + P L + ++TE+ FF T D A + G +L ++ +F ++ RLQ GL+D+VQLFL E+ E G D+ P + +AV V P G+ ++ LS+ T V+S+ + + + + A + LP+A G+L + H+ +H L AR V++G P+ +PSL+ GTFGS+ SFP RK MFD+A++GPL +SF +G+ +T A+ + ++P++ AL +SS ++ + S ++ LP VHPL ++G GL++QAL +PIGRLDGGRA+ +VFGRK + +S +L V+ V ++L FW +V FQ ++ D+ SPVD R+N+ L+L +V + L P Sbjct: 260 IDMPLWVPPS-LSVLIAKAPTELSVSCLERVKTELLPDSGFFCTSWDYCSTAAVFRGRISLSNETDLIFNGIQSRLQT-HPGLRDKVQLFLAED-----NEWTGP-SSFEDSSKPPGVIIAVPREVIPEHERIRGKTLVAALSVVLTCFTSFVFSLSAYALNGEFFRNVERNDVSAVVPTCLPLALGVLAVSAIHECSHILAARVHKVEMGCPVPLPSLETGTFGSITPLRSFPSDRKAMFDIAISGPLVATLVSFLLIVSGLDLTVTASAQELERFPVISAALVKSSYLV-GAAASFISPKLMLLPNAQPFPVHPLFLVGWSGLVSQALNILPIGRLDGGRAAMAVFGRKVSASISFFSILTLVIISFVRSSSLIFFWTAIVATFQRLADLATVDDFSPVDKTRKNIYLILLSVAVLTLWP 672
BLAST of EWM28543.1 vs. NCBI_GenBank
Match: gi|219113717|ref|XP_002186442.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209583292|gb|ACI65912.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 206.838 bits (525), Expect = 4.556e-53 Identity = 183/678 (26.99%), Postives = 307/678 (45.28%), Query Frame = 0 Query: 196 PPSPSQTNPMTEADRLQLKSQMFKLQAEKLRLEAEKEQIKMERETLLKKQKKQQDTDRLVEKLRAAQPSTTGAA---------SAEGAAAELKAVVKTYLRTIDADSVSRIREL------SAEADTPEQALAYTNLADAVIKAIEELD---------------GRQAKEIREELAFRFKDETP------PPSSSNAPFDQFSQVEAAMRNVSNPGMSSIDQLTQEMM---RNNTRGFSTIYAINLPQWLPREFM----RTLESFEPLLDEDVRALRTEVFKMDTFFVTDVDKTPLAVAYMGTLRKP---------SEEVFKDVERRLQDLEGGLKDRVQLFLFENP--RPQMQEMGGMMGGGGDAENPEVMFMAVSTRV---KPLPVGGGQATLSLLSLGATALNCLVYSILTF-YSPADIVNKLGEAPLARLDDALPVAAGILGIQLAHDLAHNLMARTKDVKLGVPIYIPSLQVGTFGSVLRFVSFPKRRKDMFDVALAGPLTGLALSFAAFAAGMAMTQGAAPEISAQWPMLPVALFRSSLMLWQVGQALFSADVVNLPLVSQIHVHPLAVIGALGLLTQALQAMPIGRLDGGRASTSVFGRKAATFLSASLVLYQVVSGVVLGNT-LQLFWGTVVIIFQNAQEMYARDEISPVDNNRRNLLLLLWAVVAVVLLP 814 PPS N E ++++ + +A L E E + ++ K KK + +V+KL +P T A SA+ A L A+ Y R S EL + E + L + D +I+ E LD GR A ++ +L R++ + +++A + V+ MR + LT+EM+ RN T + I I P W+P + RT P DV+A++ EV FF T D P A + G LR P E F+ +++++ E GL +RVQLFL +P RP P+ + +A+ + +P V + L ++G +AL YS+ F +P + + ++ L LPV G++ +QL H+LAH +A+ +D+K+G+P +PS Q+GTFG V SFP R+ + D +L+GP+ + +S + G++ T A+ + +P +P+ + +SSL L + ++ + V+ +PL I +HP+ G +GL++ AL +PI R+DGGRA T+ G + F S ++ ++S + G++ L L +G V IFQ E+ RDE++ V R ++ + A L+P Sbjct: 31 PPSKLTLNQAVE------EAEVLRQRARGLLEEVETMEAALKESRSRKANKKISEKMHMVDKLFLNRPLTPEAVARVMREERWSADQACLVLDAL---YDRLTQGSSTLSPAELKIGDHQTREGANHTEVLILESYIDCLIRGAENLDQAWSSPSESRHPRWSGRVASTLKSQLNERYRRDAENFQLRVAAGANDAVLNANETVQEYMRRTLG-----LPSLTEEMLGKSRNLTHVMNRISLI--PVWIPSSLLQFVTRTRARISP---ADVKAIKNEVLVESRFFCTSFDSIPSAAIFRGNLRPPVGHTETRNLPAECFRAIQQKMD--ERGLSERVQLFLMPDPEWRPTRDVRDS---------KPKPVILAIPQDIGPSRPESVDWRRFALKCFAVGLSALTTYTYSVSCFALNPFFFESIVSRNDVSVLRVCLPVFVGVVAVQLVHELAHYFVAKQRDIKIGLPTTVPSTQLGTFGCVTPLKSFPTTREALLDFSLSGPVAAILMSIIMMSLGISATLNASAATISTFPTVPLTMLKSSL-LTGILLSVLAPKVMMMPLPQPIPLHPIFFAGFVGLISSALNLLPIVRIDGGRACTAALGGRVGAFASIGTAMF-LLSFLASGSSGLGLAFGLFVGIFQRRPEVPVRDEVTEVGRFRLGAWVVSVGIAAFSLMP 676
BLAST of EWM28543.1 vs. NCBI_GenBank
Match: gi|1149749111|ref|XP_020197232.1| (probable zinc metalloprotease EGY1, chloroplastic [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 193.356 bits (490), Expect = 2.393e-49 Identity = 140/411 (34.06%), Postives = 212/411 (51.58%), Query Frame = 0 Query: 423 DVRALRTEVFKMDTFFVTDVDKTPLA-----VAYMGTLRKPSEEVFKDVERRLQDLEGGLKDRVQLFLFENPRPQMQEMGGMMGGGGDAENPEVMFMAVSTRV-KPLPVGGGQATLSLLSLGATALNCLVYSILTFYS--PADIV------NKLGEAP-----LARLDDALPVAAGILGIQLAHDLAHNLMARTKDVKLGVPIYIPSLQVGTFGSVLRFVSFPKRRKDMFDVALAGPLTGLALSFAAFAAGMAMTQGAAPEISAQWPMLPVALFRSSLMLWQVGQALFSADVVNLPLVSQIHVHPLAVIGALGLLTQALQAMPIGRLDGGRASTSVFGRKAATFLSASLVLYQVVSGVVLGNTLQLFWGTVVIIFQNAQEMYARDEISPVDNNRRNLLLLLWAVVAVVLLP 814 DV+A++ + F TF++T + P V ++G LR EE+F ++R+L++L G D+ LF+ E P + + G P V F + V +P P Q +SLL T +C+ I + S P DIV N G P L ++ ALPVA G+L IQL H++ H L A K+VKLG+P +IP+ +GTFGS+ +F S RK MFDV++AGPL G ALSF+ F+ G+ ++ + P + +P LF+ SL+L + +A+ ++ + + +HPL + G GL T A +P+G LDGGR FG+ A L Y ++ VLG L L WG V++ Q E D++S V RR L+ +V ++L+P Sbjct: 148 DVKAIKEKFFGYTTFWLTR--EEPFGDLGEGVLFVGNLRGDREEIFGKLQRQLRELTG---DKYNLFMVEEPNSEEDDPRG---------GPRVSFGLLRREVSEPGPTTLWQYVISLLLFLLTVFSCIELGIASKISSLPPDIVSYFTDPNATGPPPDMQLLLPFVESALPVAYGVLAIQLFHEVGHFLAAYPKNVKLGIPFFIPNFTLGTFGSITQFKSILPDRKTMFDVSMAGPLAGAALSFSMFSVGLWLS--SNPAGATDLVQVPSNLFQGSLLLGLISRAILGYSALH---AATVSIHPLVIAGWCGLTTTAFNMLPVGCLDGGRGLQGAFGKDA--LFGFGLTTYSLLGLGVLGGPLSLPWGLYVLLCQRTPEKPCLDDVSDVGTWRRGALIASVFLVVLILIP 537
BLAST of EWM28543.1 vs. NCBI_GenBank
Match: gi|326512268|dbj|BAJ96115.1| (predicted protein [Hordeum vulgare subsp. vulgare] >gi|326513534|dbj|BAJ87786.1| predicted protein [Hordeum vulgare subsp. vulgare] >gi|326534334|dbj|BAJ89517.1| predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 189.889 bits (481), Expect = 4.508e-48 Identity = 139/411 (33.82%), Postives = 211/411 (51.34%), Query Frame = 0 Query: 423 DVRALRTEVFKMDTFFVTDVDKTPLA-----VAYMGTLRKPSEEVFKDVERRLQDLEGGLKDRVQLFLFENPRPQMQEMGGMMGGGGDAENPEVMFMAVSTRV-KPLPVGGGQATLSLLSLGATALNCLVYSILTFYS--PADIV------NKLGEAP-----LARLDDALPVAAGILGIQLAHDLAHNLMARTKDVKLGVPIYIPSLQVGTFGSVLRFVSFPKRRKDMFDVALAGPLTGLALSFAAFAAGMAMTQGAAPEISAQWPMLPVALFRSSLMLWQVGQALFSADVVNLPLVSQIHVHPLAVIGALGLLTQALQAMPIGRLDGGRASTSVFGRKAATFLSASLVLYQVVSGVVLGNTLQLFWGTVVIIFQNAQEMYARDEISPVDNNRRNLLLLLWAVVAVVLLP 814 DV+A++ + F TF++T + P V ++G LR EE+F ++++L++L G D+ LF+ E P + + G P V F + V +P P Q +SLL T +C+ I + S P DIV N G P L ++ ALPVA G+L IQL H++ H L A K VKLG+P +IP+ +GTFGS+ +F S RK MFDV++AGPL G ALSF+ F+ G+ ++ + P + +P LF+ SL+L + +A+ ++ + + +HPL + G GL T A +P+G LDGGR FG+ A L Y ++ VLG L L WG V++ Q E D++S V RR L+ +V ++L+P Sbjct: 146 DVKAIKEKFFGYTTFWLTR--EEPFGDLGEGVLFVGNLRGDREEIFGKLQQQLRELTG---DKYNLFMVEEPNSEEDDPRG---------GPRVSFGLLRREVSEPGPTTLWQYVISLLLFLLTVFSCIELGIASKISSLPPDIVSYFTDPNATGPPPDMQLLLPFVESALPVAYGVLAIQLFHEIGHILAAYPKKVKLGIPFFIPNFTLGTFGSITQFKSILPDRKTMFDVSMAGPLAGAALSFSMFSVGLWLS--SNPAGATDLVQVPSNLFQGSLLLGLISRAILGYSALH---AATVSIHPLVIAGWCGLTTTAFNMLPVGCLDGGRGLQGAFGKDA--LFGFGLTTYSLLGLGVLGGPLSLPWGLYVLLCQRTPEKPCLDDVSDVGAWRRGALIASVFLVVLILIP 535 The following BLAST results are available for this feature:
BLAST of EWM28543.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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