EWM28609.1, cds2053 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28609.1 vs. NCBI_GenBank
Match: gi|585111027|gb|EWM28609.1| (pas-domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1177.93 bits (3046), Expect = 0.000e+0 Identity = 591/591 (100.00%), Postives = 591/591 (100.00%), Query Frame = 0
Query: 1 MEADFGRSSLVNSSNMPGNVMSQPSNGGWPTSNHAYASTSIPQGPPTHAHTAPPLQPTSAYSRWLYEGGAGTGAAPSLPYPQQNQPPSQPPPPPQQTGESWIPGAGGGELVNGGRRIGEARGGGEGGEGGAGGTARPQTLGYWGASMPSAGYSGSGGGAASKGSESDSSDEGSTARPGGAKGRKLPSNGRDSSELEKRLKKNAREQKRANKINDQIAIMKTILESVGLRPPPTKSSILAEGIQLIRSLLAQVGPEGKAPGTEPSQAEPYWLLFRKSATPLAMCRPDGHGRFLDCNTRFCEVFGCTPEELQKETPLSFTREYDAENTQRVLALVSQPGLLDESSPLEVVLTNKHQQRFLVRVSSLLDDYQKPRFLLFTPKAMLRGVNGQEPSSAPPSSFASAPPLPSQPAPHPAVLAGPVAPPLVPSQSSMPSSAASSSSSLGAMLPIPISQAPDPHLPQISLLSPQAPPTREPRAPHIHNQPHHQHYQQHLHHILQQHNPGSPQDAPPPQQRQHQAFPAAVQEASSPSPQAGRVAENDQKPSPPPLPFNLRFPPLSTTEAASVVDRATAIPRPAPRPTTRQGSQSRALSPL 591
MEADFGRSSLVNSSNMPGNVMSQPSNGGWPTSNHAYASTSIPQGPPTHAHTAPPLQPTSAYSRWLYEGGAGTGAAPSLPYPQQNQPPSQPPPPPQQTGESWIPGAGGGELVNGGRRIGEARGGGEGGEGGAGGTARPQTLGYWGASMPSAGYSGSGGGAASKGSESDSSDEGSTARPGGAKGRKLPSNGRDSSELEKRLKKNAREQKRANKINDQIAIMKTILESVGLRPPPTKSSILAEGIQLIRSLLAQVGPEGKAPGTEPSQAEPYWLLFRKSATPLAMCRPDGHGRFLDCNTRFCEVFGCTPEELQKETPLSFTREYDAENTQRVLALVSQPGLLDESSPLEVVLTNKHQQRFLVRVSSLLDDYQKPRFLLFTPKAMLRGVNGQEPSSAPPSSFASAPPLPSQPAPHPAVLAGPVAPPLVPSQSSMPSSAASSSSSLGAMLPIPISQAPDPHLPQISLLSPQAPPTREPRAPHIHNQPHHQHYQQHLHHILQQHNPGSPQDAPPPQQRQHQAFPAAVQEASSPSPQAGRVAENDQKPSPPPLPFNLRFPPLSTTEAASVVDRATAIPRPAPRPTTRQGSQSRALSPL
Sbjct: 1 MEADFGRSSLVNSSNMPGNVMSQPSNGGWPTSNHAYASTSIPQGPPTHAHTAPPLQPTSAYSRWLYEGGAGTGAAPSLPYPQQNQPPSQPPPPPQQTGESWIPGAGGGELVNGGRRIGEARGGGEGGEGGAGGTARPQTLGYWGASMPSAGYSGSGGGAASKGSESDSSDEGSTARPGGAKGRKLPSNGRDSSELEKRLKKNAREQKRANKINDQIAIMKTILESVGLRPPPTKSSILAEGIQLIRSLLAQVGPEGKAPGTEPSQAEPYWLLFRKSATPLAMCRPDGHGRFLDCNTRFCEVFGCTPEELQKETPLSFTREYDAENTQRVLALVSQPGLLDESSPLEVVLTNKHQQRFLVRVSSLLDDYQKPRFLLFTPKAMLRGVNGQEPSSAPPSSFASAPPLPSQPAPHPAVLAGPVAPPLVPSQSSMPSSAASSSSSLGAMLPIPISQAPDPHLPQISLLSPQAPPTREPRAPHIHNQPHHQHYQQHLHHILQQHNPGSPQDAPPPQQRQHQAFPAAVQEASSPSPQAGRVAENDQKPSPPPLPFNLRFPPLSTTEAASVVDRATAIPRPAPRPTTRQGSQSRALSPL 591
BLAST of EWM28609.1 vs. NCBI_GenBank
Match: gi|585111028|gb|EWM28610.1| (pas-domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1102.81 bits (2851), Expect = 0.000e+0 Identity = 556/556 (100.00%), Postives = 556/556 (100.00%), Query Frame = 0
Query: 36 YASTSIPQGPPTHAHTAPPLQPTSAYSRWLYEGGAGTGAAPSLPYPQQNQPPSQPPPPPQQTGESWIPGAGGGELVNGGRRIGEARGGGEGGEGGAGGTARPQTLGYWGASMPSAGYSGSGGGAASKGSESDSSDEGSTARPGGAKGRKLPSNGRDSSELEKRLKKNAREQKRANKINDQIAIMKTILESVGLRPPPTKSSILAEGIQLIRSLLAQVGPEGKAPGTEPSQAEPYWLLFRKSATPLAMCRPDGHGRFLDCNTRFCEVFGCTPEELQKETPLSFTREYDAENTQRVLALVSQPGLLDESSPLEVVLTNKHQQRFLVRVSSLLDDYQKPRFLLFTPKAMLRGVNGQEPSSAPPSSFASAPPLPSQPAPHPAVLAGPVAPPLVPSQSSMPSSAASSSSSLGAMLPIPISQAPDPHLPQISLLSPQAPPTREPRAPHIHNQPHHQHYQQHLHHILQQHNPGSPQDAPPPQQRQHQAFPAAVQEASSPSPQAGRVAENDQKPSPPPLPFNLRFPPLSTTEAASVVDRATAIPRPAPRPTTRQGSQSRALSPL 591
YASTSIPQGPPTHAHTAPPLQPTSAYSRWLYEGGAGTGAAPSLPYPQQNQPPSQPPPPPQQTGESWIPGAGGGELVNGGRRIGEARGGGEGGEGGAGGTARPQTLGYWGASMPSAGYSGSGGGAASKGSESDSSDEGSTARPGGAKGRKLPSNGRDSSELEKRLKKNAREQKRANKINDQIAIMKTILESVGLRPPPTKSSILAEGIQLIRSLLAQVGPEGKAPGTEPSQAEPYWLLFRKSATPLAMCRPDGHGRFLDCNTRFCEVFGCTPEELQKETPLSFTREYDAENTQRVLALVSQPGLLDESSPLEVVLTNKHQQRFLVRVSSLLDDYQKPRFLLFTPKAMLRGVNGQEPSSAPPSSFASAPPLPSQPAPHPAVLAGPVAPPLVPSQSSMPSSAASSSSSLGAMLPIPISQAPDPHLPQISLLSPQAPPTREPRAPHIHNQPHHQHYQQHLHHILQQHNPGSPQDAPPPQQRQHQAFPAAVQEASSPSPQAGRVAENDQKPSPPPLPFNLRFPPLSTTEAASVVDRATAIPRPAPRPTTRQGSQSRALSPL
Sbjct: 25 YASTSIPQGPPTHAHTAPPLQPTSAYSRWLYEGGAGTGAAPSLPYPQQNQPPSQPPPPPQQTGESWIPGAGGGELVNGGRRIGEARGGGEGGEGGAGGTARPQTLGYWGASMPSAGYSGSGGGAASKGSESDSSDEGSTARPGGAKGRKLPSNGRDSSELEKRLKKNAREQKRANKINDQIAIMKTILESVGLRPPPTKSSILAEGIQLIRSLLAQVGPEGKAPGTEPSQAEPYWLLFRKSATPLAMCRPDGHGRFLDCNTRFCEVFGCTPEELQKETPLSFTREYDAENTQRVLALVSQPGLLDESSPLEVVLTNKHQQRFLVRVSSLLDDYQKPRFLLFTPKAMLRGVNGQEPSSAPPSSFASAPPLPSQPAPHPAVLAGPVAPPLVPSQSSMPSSAASSSSSLGAMLPIPISQAPDPHLPQISLLSPQAPPTREPRAPHIHNQPHHQHYQQHLHHILQQHNPGSPQDAPPPQQRQHQAFPAAVQEASSPSPQAGRVAENDQKPSPPPLPFNLRFPPLSTTEAASVVDRATAIPRPAPRPTTRQGSQSRALSPL 580
BLAST of EWM28609.1 vs. NCBI_GenBank
Match: gi|960351392|gb|ALR84571.1| (bHLH transcription factor 2 [Nannochloropsis salina]) HSP 1 Score: 689.878 bits (1779), Expect = 0.000e+0 Identity = 470/510 (92.16%), Postives = 479/510 (93.92%), Query Frame = 0
Query: 36 YASTSIPQGPPTHAHTAPPLQPTSAYSRWLYEGGAGTGAAPSLPYPQQNQPPSQPPPPPQQTGESWIPGAGGGELVNGGRRIGEARGGGEGGEGGAGGTARPQTLGYWGASMPSAGYSGSGGGAASKGSESDSSDEGS----TARPGGAKGRKLPSNGRDSSELEKRLKKNAREQKRANKINDQIAIMKTILESVGLRPPPTKSSILAEGIQLIRSLLAQVGPEGKAPGTEPSQAEPYWLLFRKSATPLAMCRPDGHGRFLDCNTRFCEVFGCTPEELQKETPLSFTREYDAENTQRVLALVSQPGLLDESSPLEVVLTNKHQQRFLVRVSSLLDDYQKPRFLLFTPKAMLRGVNGQEPSSAPPSSFASAPPLPSQPAPHPAVLAGPVAPPLVPSQ-SSMPSSAASSSSSLGAMLPIPISQAPDPHLPQISLLSPQAPPTREPRAPHIHNQPHHQHYQQHLHHILQQHNPGSPQDAPPPQQRQHQAFPAAVQEASSPSPQAGRVAENDQK 540
Y STSIPQGPPTHAHTAPPLQPTSAY RWLYEGGAGTGAAPSLPYPQQ+QPPSQPPPPPQQTG SWIPGAGGGELVNGGRRIGEARGGGEGGEGG GGTARPQTLGYWGA +PSAGYSG G G + S + S TARPGG KGRKLPSNGRDSSELEKRLKKNAREQKRANKINDQIAIMKTILESVGLRPPPTKSSILAEGIQLIRSLLAQ+GPEGKAPGTEPSQAEPYWLLFRKSATPLAMCRPDGHGRFLDCNTRFCEVFGCTPEELQKETPLSFTREYDAENTQRVLALVSQPGLLDESSPLEVVLTNKHQQRFLVRVSSLLDDYQKPRFLLFTPKAMLRGVNGQEPSSAPPSSFASAPPLPSQPAPHPAV AG VAPPL+PSQ S+MPSSA+SSSSSLGAMLPIPISQAPDP LPQISLLSPQAPPTREPRAPHIHNQ HHQHYQQHLHHILQQHNPGSPQDAPP QQRQ QAFPAA+QEASS SPQAGRVAENDQK
Sbjct: 25 YGSTSIPQGPPTHAHTAPPLQPTSAYPRWLYEGGAGTGAAPSLPYPQQHQPPSQPPPPPQQTGGSWIPGAGGGELVNGGRRIGEARGGGEGGEGGTGGTARPQTLGYWGAGVPSAGYSGGGLGGGGGAASKGSESDSSDEGSTARPGGGKGRKLPSNGRDSSELEKRLKKNAREQKRANKINDQIAIMKTILESVGLRPPPTKSSILAEGIQLIRSLLAQIGPEGKAPGTEPSQAEPYWLLFRKSATPLAMCRPDGHGRFLDCNTRFCEVFGCTPEELQKETPLSFTREYDAENTQRVLALVSQPGLLDESSPLEVVLTNKHQQRFLVRVSSLLDDYQKPRFLLFTPKAMLRGVNGQEPSSAPPSSFASAPPLPSQPAPHPAVSAGTVAPPLMPSQSSTMPSSASSSSSSLGAMLPIPISQAPDPLLPQISLLSPQAPPTREPRAPHIHNQLHHQHYQQHLHHILQQHNPGSPQDAPPQQQRQQQAFPAALQEASSSSPQAGRVAENDQK 534
BLAST of EWM28609.1 vs. NCBI_GenBank
Match: gi|1154259166|gb|AQX45500.1| (bHLH transcription factor [Aurantiochytrium sp.]) HSP 1 Score: 642.114 bits (1655), Expect = 0.000e+0 Identity = 437/510 (85.69%), Postives = 448/510 (87.84%), Query Frame = 0
Query: 36 YASTSIPQGPPTHAHTAPPLQPTSAYSRWLYEGGAGTGAAPSLPYPQQNQPPSQPPPPPQQTGESWIPGAGGGELVNGGRRIGEARGGGEGGEGGAGGTARPQTLGYWGASMPSAGYSGSGGGAASKGSESDSSDEGSTARPGGAKGRKLPSNGRDSSELEKRLKKNAREQKRANKINDQIAIMKTILESVGLRPPPTKSSILAEGIQLIRSLLAQVGPEGKAPG-TEPSQAEPYWLLFRKSATPLAMCRPDGHGRFLDCNTRFCEVFGCTPE-ELQKETPLSFTREYDAENTQRVLALVSQPGLLDESSPLEVVLTNKHQQRFLVRVSSLLDDYQKPRFLLFTPKAMLRGVNGQEPSSAPPSSFASAPPLPSQPAPHPAVLAGPVAPPLVPSQ-SSMPSSAASSSSSLGAMLPIPISQAPDPHLPQISLLSPQAPPTREPRAPHIHNQPHHQHYQQHLHHILQQHNPGSPQDAPPPQQRQHQAFPAAVQEASSPSPQAGRVAENDQKPS 542
Y STSIPQGPPTHAHTAPPLQPTSAY RWL GAGTGAAPSLPYPQQ+QPPS PPPPPQQTG SWIPGAGGGELVN RIGEARGGGEGGEGG GGTARPQTLGYWGA +PSAGY + + SSDEGSTARPGG KGRKLPSNGRDSSELEKRLKKNAREQKRANKINDQIAIMKTILESVGLRPPPTKSSILAEGIQLIRSLLAQ+GPEGKAPG TEPSQAEPYWLLFRKSATPLAMCRPDGHGRFLDCNTRFCEVFGCTPE ELQKETPLSFTREYDAENTQRVLALVSQPGLLDESSPLEVVLTNKHQQRFLVRVSSLLDDYQKPRFLLFTPKAMLRGVNGQEPSSAPPSSFASAPPLPSQPAPHPAV AG VAPPL+PSQ S+MPSSA+SSSSSLGAM QAPDP LPQISLLSPQAPPTREPRAPHIHNQ HHQHYQQHLHHILQQHNPGS + Q+A +PQAGRVAEND PS
Sbjct: 22 YGSTSIPQGPPTHAHTAPPLQPTSAYPRWL---GAGTGAAPSLPYPQQHQPPSFPPPPPQQTGGSWIPGAGGGELVN---RIGEARGGGEGGEGGTGGTARPQTLGYWGAGVPSAGY------SGGGLGDGGSSDEGSTARPGGGKGRKLPSNGRDSSELEKRLKKNAREQKRANKINDQIAIMKTILESVGLRPPPTKSSILAEGIQLIRSLLAQIGPEGKAPGKTEPSQAEPYWLLFRKSATPLAMCRPDGHGRFLDCNTRFCEVFGCTPEAELQKETPLSFTREYDAENTQRVLALVSQPGLLDESSPLEVVLTNKHQQRFLVRVSSLLDDYQKPRFLLFTPKAMLRGVNGQEPSSAPPSSFASAPPLPSQPAPHPAVSAGTVAPPLMPSQSSTMPSSASSSSSSLGAM-----RQAPDPLLPQISLLSPQAPPTREPRAPHIHNQLHHQHYQQHLHHILQQHNPGS--------PQDAPPQQQRQQQAFPAAPQAGRVAENDHPPS 506 The following BLAST results are available for this feature:
BLAST of EWM28609.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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