rna2057, rna2057 (mRNA) Nannochloropsis gaditana

Overview
Namerna2057
Unique Namerna2057
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length963
Alignment locationCM002458.1:789565..789795 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100009g107.597.mrna
Orig protein idgnl|cribi|Naga_100009g107.597
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:789565..789795 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100009g107gene1968Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28554.1cds2049Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2057rna2057-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2057 ID=rna2057|Name=rna2057|organism=Nannochloropsis gaditana|type=mRNA|length=963bp
ATGCTTCTCCGTTTATCAAACCTTGGTCACCGTCCAGTTCTAGCTTTACA
ACGTCACATCGGCACGTATCCCGCAAAGTTCACAACCGGCGCGTCAACTG
CAAGACGAGAGATGCATTTCGAGACGCTTACCATCGAAACAAATCGCAGT
GACGCACCAGGCGTGGCTTTCGTCACAATTAATCGCCCACGCAAGCGTAA
TGCGATGAATAGTAAGTTTTGGGGAGAGTGCAAAGAAGTCTTTGACACGC
TGGGGGAGGAGGGAGAAGTGCGCGCGGTGGTACTGGCGGGAGCGGGAAAG
GTGTTTACCTCCGGCTTAGACTTGTCAGACATCGGCATCGACTTAATGGG
TGGAAGTGGCGGTGGCAGTGAGGGAGAAAGCGTCGACGTGGCCCGGCAGG
CCTTCAAAATCAAGAGACATGTCACACGCATGCAAGAAGCCTTCAACGCC
ATCGAACGCATCCCTCAACCCGTGGTGGCGGCCATTCACGGGGCATGTAT
CGGTGGGGGAATCGACTTGATAGCTGCATGTGACATACGGTACGCCTGTG
CAGAGACAATTTTTAGCATCAAGGAGGTGGACATCGGCCTGGCGGCAGAC
TTAGGCACCCTGCAGAGGCTTCCGCGCGTGACCGGCAACGAAAGCTTGCT
GCGAGAGCTCGCTTTCACAGGACGCAATTTTTCGAGTGCCGAAGGACAGG
CATTAGGCTTGCTTAGCTCTGTCCTGCCCTCACCCGCGGAGACATTGGCG
AGAGCGACGGGTCTCGCCATGGAGATCGCACGCAAAAGCCCAGTGGCAGT
CGCAGGCACAAAGGCCAATTTGCTGTACTCTCGGGACCACAGCGTCCAAG
ATGGACTGAATTACATGACTACCTGGAACATGGCAGCATTGCAGAGCGAA
GACATCGGCAAGGCGGTCCAAGGGGCGATGCTGAAGGAAAGACCGACGTT
CTCGAAGTTGTGA
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protein sequence of rna2057

>rna2057-protein ID=rna2057-protein|Name=rna2057|organism=Nannochloropsis gaditana|type=polypeptide|length=76bp
MQYRSKHSLLILGNGEEEDAMYRHVQNGGREIEGHSTRRKGAMERHAEGE
CRLFVDCEGMPWIPEAPLCPGKHLII
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mRNA from alignment at CM002458.1:789565..789795-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2057 ID=rna2057|Name=rna2057|organism=Nannochloropsis gaditana|type=mRNA|length=231bp|location=Sequence derived from alignment at CM002458.1:789565..789795- (Nannochloropsis gaditana)
ATGCAATATAGGTCAAAGCACAGTCTTTTAATCCTAGGCAACGGGGAGGA
AGAAGATGCCATGTACAGACATGTACAGAATGGGGGAAGGGAGATAGAGG
GGCATAGCACGCGAAGGAAAGGAGCGATGGAAAGGCACGCTGAGGGAGAG
TGTAGGCTGTTTGTCGACTGCGAGGGCATGCCTTGGATCCCGGAGGCTCC
GCTTTGTCCCGGAAAGCATCTGATCATTTAA
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Coding sequence (CDS) from alignment at CM002458.1:789565..789795-

>rna2057 ID=rna2057|Name=rna2057|organism=Nannochloropsis gaditana|type=CDS|length=231bp|location=Sequence derived from alignment at CM002458.1:789565..789795- (Nannochloropsis gaditana)
ATGCAATATAGGTCAAAGCACAGTCTTTTAATCCTAGGCAACGGGGAGGA
AGAAGATGCCATGTACAGACATGTACAGAATGGGGGAAGGGAGATAGAGG
GGCATAGCACGCGAAGGAAAGGAGCGATGGAAAGGCACGCTGAGGGAGAG
TGTAGGCTGTTTGTCGACTGCGAGGGCATGCCTTGGATCCCGGAGGCTCC
GCTTTGTCCCGGAAAGCATCTGATCATTTAA
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Synonyms
Publications