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Properties
Property Name | Value |
Product | glycerophosphodiester phosphodiesterase domain-containing protein 1 |
Orig transcript id | gnl|cribi|Naga_100002g11.4841.mrna |
Orig protein id | gnl|cribi|Naga_100002g11.4841 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002458.1 | supercontig | CM002458.1:694788..696479 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2011 ID=rna2011|Name=rna2011|organism=Nannochloropsis gaditana|type=mRNA|length=2130bp ATGAGTCATATTGACAACACAGGGGAAAAGAAAGAGCAGCAGCTGCCCCA CACAACCTCAAAATTGGAATCTTCAATGATTTCCGGACCCAACAGAGAGC CTTACTCACAACCTTTGGGTTTTGCTGTTGACCTGGACCGAGAGCTTGGA GGGAAATTTCGAAATTTATGGCCTTACCGCATCCTTAACGAGGTGCAAAG TGCATTTTGGCCAGTGTGCTTCAACACTGATCACAACGTGGTCATTGCTG CACCAACAGGTGTAGGTAAGACCATGGCCTTAGAGGCAGCTATTTGTCGT CTTTTGCAAGAGGATGAGGGTACGGGGAATGGGCGAAAGACTTGGAAAGC TGTGTACGTCGCCCCTGTCAAGGCTCTATGTCAACAGCGCTTGGTAGACT GGCAGCGGCGTTTCGAGACGAGATTCGGTCTAAAATGTGCCGAGCTGACC GGCGACTCAGCAGGTATGCGCGAGGTGGCCGCTTCTCAGATTATCTTGAC CACACCGGAGAAATTCGACGCGGTTTCGCGCGACTGGCGGGACAATCTCT ACCTGCTGGGCTCCGTCCGCTTGGTTCTCATCGACGAAGCACATTTTCTG GGAGAAGATCCGCGGGGTTCAGCCCTCGAGGCACTTATTTGTCGGCTCAG GGTCATGAAATCCCACAAAGTGATCATGGATAAGGGCTTGCCTGCCTCCA AGCTTCGCATCCTGGCCGCTTCTGCAACACTGCCAAATGTCGAGGACATA GGAAGATGGCTAGAGGCACCCCCAGAGGCTACCTTCAACTTTGACTACAC CCACCGACCCGTCCCTCTTGAAATTCACGTCCTCGGCTACGCAAATGCCA GCAACCCTTTCCTATTTCAACGCACTCTAGAAGGCCGTGCACCGGAGGTG ATCGGCCGATATTCGGAGGGGAAGGCGACACTGGTCTTTTGCGGAAGCAA AAAGGGAGCGGAGGCATTGGCTACTAAGCTTGCTGAAGCTGGAAGTGGAT TGGGATTGGGCAACAAGCAGTTGGGAAGAGGCGGGATGCAAGGAAGGAGC CAGCAGCGACTGGAAGCTGAGCGTTTTTCAAACATCCAGAATCATAAGCT CAAAGACCTCCTTCTAACCTCAGATGGTGCGGTGGCCTTCCACCATGCGG GTCTTACAGCCGAAGATAGGACATGTGTGGAGACCCTTTTCCAGCAAGGT GTTGTTCGCACTCTCTGCTCAACCTCCACGCTTGCACAAGGAATCAACAG TCCTGCCTTTCTAGCCATAATATTGGGAACCACCTTCTGGCGTGGCGCTG GAACCGGTTACGAAGATTTGCCCGTCTCGGCCGTGTTGCAGATGATAGGC CGCGCCGGGAGGCCAGGAAACGATGATCGAGGAGTGGCGGTCATCATGAC AAGCAAGGAGAAGGAACTCATGTACATGTCGATGGCCGAAGGGCAAGAAG TCGTCGAATCCCAGCTCCCAGCCCGTTTTCACGAGAGCTTGAACGCAGAG GTGTGTTCCAATGTCATCAGTGACCTTGGCGGCGCGATTCGATGGCTGCG TTCCACCTTCTTGTGGGTCCGCGCGCATCGCAACCCGGATTATTACACCG CGCTCCTCCCGCGCGGTACCATCTGTAGGGATGCGGATAACAGTATAGGG GAATATCTGAAAGCGTATATGCTGCGCATCTTGGCTGAGTTGCAAGCAGA AAATGTCCTGCGCCTGGAGAAGACAGTCGGTCTGAGCCGCGATGGAGCAC CAATAGACAATCTAGAAACTGAAAACATTGTGCCGCTTGTAGCGGGACGG GTCATGAGCAAGACATTGGTGAGCTTTGAAACTATCAAAGTACTCCGTGC CGTCCCCTCCGACGCCAGCTTGGAGGCCCTACTTTACGCGTGCTGTGGCT GTCCAGAGGTTTGCAACCCAGTCCGTAAAGCTGAGAAACGGCCATTGAAT GATCTGCTGAAGCGCGTCCGCTTTTCAAAGGGGCTCGGTATTAAGAAATG CACGCATCCGTCTCACAAAGCGTTCGTACTTGTTCAGGCTTGTCTTGGGA ACCTGGAAATCGTTGATTTTACTTTGAAGGTAAGTGACAACCCTATGTGC TTGATAAGTAGTGTATGTGCTGAGGAGTGA back to topprotein sequence of rna2011 >rna2011-protein ID=rna2011-protein|Name=rna2011|organism=Nannochloropsis gaditana|type=polypeptide|length=405bp MELTEILGSVSNASVMIHLIGMYVTFCIVSILLHHFPALLHRPKKRLYEP VVQPETLDPVKSKSLCCKVSTGTSISVAMKSNVDPRFRVQHIAHRGSRLE GLPENTLASFAHAVAAGSDVIELDVWLTKDEKVVVFHDADLERMCGAPAS RAALATVDAREATTKPGTTRERRSIGIPDLLFHELPEISLDSEAHWAVDA GNRAEACRIPLFSEVLALVPPHKTMIVEVKQKSAVLIRKVHELIVARGRL ERTIWFSLSEDINADLRAYDPSIPNISSVVGMLKCIFFYYTGILPFVRLN EDILGIPIDRVDYARVREQKALKALPDAVCAILAFVLGGKPPSALIPPGL FKHLRARGIPIFFLGVNDEEDLKVAEVAGSTAVLTDRPRWLSQRMMEGKV ALKQL back to topmRNA from alignment at CM002458.1:694788..696479+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2011 ID=rna2011|Name=rna2011|organism=Nannochloropsis gaditana|type=mRNA|length=1692bp|location=Sequence derived from alignment at CM002458.1:694788..696479+ (Nannochloropsis gaditana) ATGGAACTCACTGAAATCTTGGGCTCCGTGTCAAATGCCTCTGTAATGAT
ACATCTGATTGGTATGTACGTCACGTTTTGCATCGTAAGTATACTCCTTC
ACCactttcctgccctcctgcACCGTCCCAAAAAACGACTCTATGAACCA
GTCGTCCAGCCAGAGACCCTTGATCCGGTCAAAAGTAAAAGTTTATGTTG
TAAAGTATCAACGGGTACCTCGATTTCTGTTGCCATGAAGAGTAATGTCG
ACCCAAGATTTCGTGTGCAGCACATCGCACACAGAGGCTCTCGGCTGGAG
GGTCTACCGGAGAACACGCTGGCCTCATTCGCCCACGCTGTTGCCGCGGG
CTCAGATGTCATCGAACTTGACGTGTGGTTAACCAAAGATGAGAAAGTGG
TGGTGTTTCATGACGCGGATTTGGAGAGGATGTGCGGAGCACCGGCTTCA
AGGGCAGCTCTCGCGACTGTGGACGCCAGGGAGGCGACAACGAAGCCTGG
CACCACCCGAGAGCGGCGCAGCATAGGCATCCCCGACCTGCTTTTTCATG
AACTACCGGAAATATCTTTGGATAGTGAAGCGCACTGGGCTGTGGATGCA
GGCAATCGGGCAGAGGCCTGTCGCATCCCTCTGTTTTCCGAGGTGCTGGC
GCTAGTCCCCCCCCACAAGACCATGATAGTTGAAGTTAAGCAAAAGAGTG
CGGTAAGTTAATTTGGTCAGAACTTTTGCGTTCCTTTTCCCGTTTCAAAA
CATTTAAGGGTATGCCATAAGTGGAGGCGATTTGAGGAACTGGTTCTCAT
GAGAGAGAGTGAATCGTCGTTCGCGTGTCTTCGACCGGCCATTTTGTACC
TACGTTATCGAGAATGACTAATGAATTGGTTCCTGGTAGGTGCTTATCCG
CAAGGTGCATGAATTAATCGTGGCGCGAGGCCGGCTGGAGCGAACCATCT
GGTTCAGTCTGTCTGAGGATATAAATGCCGACCTCCGAGCTTACGATCCG
TCAATACCCAATATTTCATCAGTCGTGGGCATGCTTAAGGTAATGAGAGG
ATAACGGATGATAAATTGTTCAGCGATGCCGTCCTCTCGATTTCTGCCGT
GTGATCCTCAGAGACCATCTCTCATTTTCTtacccacctccacctccacg
tcgcACAGTGTATATTTTTTTACTACACGGGAATTCTACCGTTTGTCCGA
CTGAATGAGGACATACTGGGGATTCCAATTGATAGGGTGGACTACGCCAG
AGTCAGAGAACAGAAAGCACTGAAAGCTCTTCCTGACGCTGTCTGCGCCA
TTCTGGCCTTCGTGCTGGGCGGAAAGCCACCCTCAGCGCTCATCCCGCCT
GGACTTTTTAAACATCTGCGTGCTCGAGGTATACCGATATTTTTCTTGGG
GGTCaacgatgaagaggacctCAAGGTAAGGAAGAGATTGCTGTAAGTTC
AGGAGAGCAGTAGTGTACGTGTCGCCCGTGTGTGTGCTTGAACATGCAGG
ATCTATGCGTAAGGACGCGGACAATGACAAATATTCGCAATGCCTTTCAT
GCTCCGAAGCTTATCGCATCATTTGTTTTTTTAAAACTCATAGGTTGCCG
AAGTGGCGGGCTCCACCGCGGTTCTAACGGACAGGCCACGATGGCTGAGC
CAACGCATGATGGAGGGCAAAGTAGCGTTGAAGCAACTGTGA back to topCoding sequence (CDS) from alignment at CM002458.1:694788..696479+ >rna2011 ID=rna2011|Name=rna2011|organism=Nannochloropsis gaditana|type=CDS|length=4872bp|location=Sequence derived from alignment at CM002458.1:694788..696479+ (Nannochloropsis gaditana) ATGGAACTCACTGAAATCTTGGGCTCCGTGTCAAATGCCTCTGTAATGAT ACATCTGATTGGTATGTACGTCACGTTTTGCATCGTAAGTATACTCCTTC ACCactttcctgccctcctgcACCGTCCCAAAAAACGACTCTATGAACCA GTCGTCCAGCCAGAGACCCTTGATCCGGTCAAAAGTAAAAGTTTATGTTG TAAAGTATCAACGGGTACCTCGATTTCTGTTGCCATGAAGAGTAATGTCG ACCCAAGATTTCGTGTGCAGCACATCGCACACAGAGGCTCTCGGCTGGAG GGTCTACCGGAGAACACGCTGGCCTCATTCGCCCACGCTGTTGCCGCGGG CTCAGATGTCATCGAACTTGACGTGTGGTTAACCAAAGATGAGAAAGTGG TGGTGTTTCATGACGCGGATTTGGAGAGGATGTGCGGAGCACCGGCTTCA AGGGCAGCTCTCGCGACTGTGGACGCCAGGGAGGCGACAACGAAGCCTGG CACCACCCGAGAGCGGCGCAGCATAGGCATCCCCGACCTGCTTTTTCATG AACTACCGGAAATATCTTTGGATAGTGAAGCGCACTGGGCTGTGGATGCA GGCAATCGGGCAGAGGCCTGTCGCATCCCTCTGTTTTCCGAGGTGCTGGC GCTAGTCCCCCCCCACAAGACCATGATAGTTGAAGTTAAGCAAAAGAGTG CGGTGCTTATCCGCAAGGTGCATGAATTAATCGTGGCGCGAGGCCGGCTG GAGCGAACCATCTGGTTCAGTCTGTCTGAGGATATAAATGCCGACCTCCG AGCTTACGATCCGTCAATACCCAATATTTCATCAGTCGTGGGCATGCTTA AGTGTATATTTTTTTACTACACGGGAATTCTACCGTTTGTCCGACTGAAT GAGGACATACTGGGGATTCCAATTGATAGGGTGGACTACGCCAGAGTCAG AGAACAGAAAGCACTGAAAGCTCTTCCTGACGCTGTCTGCGCCATTCTGG CCTTCGTGCTGGGCGGAAAGCCACCCTCAGCGCTCATCCCGCCTGGACTT TTTAAACATCTGCGTGCTCGAGGTATACCGATATTTTTCTTGGGGGTCaa cgatgaagaggacctCAAGGTTGCCGAAGTGGCGGGCTCCACCGCGGTTC TAACGGACAGGCCACGATGGCTGAGCCAACGCATGATGGAGGGCAAAGTA GCGTTGAAGCAACTGTGAATGGAACTCACTGAAATCTTGGGCTCCGTGTC AAATGCCTCTGTAATGATACATCTGATTGGTATGTACGTCACGTTTTGCA TCGTAAGTATACTCCTTCACCactttcctgccctcctgcACCGTCCCAAA AAACGACTCTATGAACCAGTCGTCCAGCCAGAGACCCTTGATCCGGTCAA AAGTAAAAGTTTATGTTGTAAAGTATCAACGGGTACCTCGATTTCTGTTG CCATGAAGAGTAATGTCGACCCAAGATTTCGTGTGCAGCACATCGCACAC AGAGGCTCTCGGCTGGAGGGTCTACCGGAGAACACGCTGGCCTCATTCGC CCACGCTGTTGCCGCGGGCTCAGATGTCATCGAACTTGACGTGTGGTTAA CCAAAGATGAGAAAGTGGTGGTGTTTCATGACGCGGATTTGGAGAGGATG TGCGGAGCACCGGCTTCAAGGGCAGCTCTCGCGACTGTGGACGCCAGGGA GGCGACAACGAAGCCTGGCACCACCCGAGAGCGGCGCAGCATAGGCATCC CCGACCTGCTTTTTCATGAACTACCGGAAATATCTTTGGATAGTGAAGCG CACTGGGCTGTGGATGCAGGCAATCGGGCAGAGGCCTGTCGCATCCCTCT GTTTTCCGAGGTGCTGGCGCTAGTCCCCCCCCACAAGACCATGATAGTTG AAGTTAAGCAAAAGAGTGCGGTGCTTATCCGCAAGGTGCATGAATTAATC GTGGCGCGAGGCCGGCTGGAGCGAACCATCTGGTTCAGTCTGTCTGAGGA TATAAATGCCGACCTCCGAGCTTACGATCCGTCAATACCCAATATTTCAT CAGTCGTGGGCATGCTTAAGTGTATATTTTTTTACTACACGGGAATTCTA CCGTTTGTCCGACTGAATGAGGACATACTGGGGATTCCAATTGATAGGGT GGACTACGCCAGAGTCAGAGAACAGAAAGCACTGAAAGCTCTTCCTGACG CTGTCTGCGCCATTCTGGCCTTCGTGCTGGGCGGAAAGCCACCCTCAGCG CTCATCCCGCCTGGACTTTTTAAACATCTGCGTGCTCGAGGTATACCGAT ATTTTTCTTGGGGGTCaacgatgaagaggacctCAAGGTTGCCGAAGTGG CGGGCTCCACCGCGGTTCTAACGGACAGGCCACGATGGCTGAGCCAACGC ATGATGGAGGGCAAAGTAGCGTTGAAGCAACTGTGAATGGAACTCACTGA AATCTTGGGCTCCGTGTCAAATGCCTCTGTAATGATACATCTGATTGGTA TGTACGTCACGTTTTGCATCGTAAGTATACTCCTTCACCactttcctgcc ctcctgcACCGTCCCAAAAAACGACTCTATGAACCAGTCGTCCAGCCAGA GACCCTTGATCCGGTCAAAAGTAAAAGTTTATGTTGTAAAGTATCAACGG GTACCTCGATTTCTGTTGCCATGAAGAGTAATGTCGACCCAAGATTTCGT GTGCAGCACATCGCACACAGAGGCTCTCGGCTGGAGGGTCTACCGGAGAA CACGCTGGCCTCATTCGCCCACGCTGTTGCCGCGGGCTCAGATGTCATCG AACTTGACGTGTGGTTAACCAAAGATGAGAAAGTGGTGGTGTTTCATGAC GCGGATTTGGAGAGGATGTGCGGAGCACCGGCTTCAAGGGCAGCTCTCGC GACTGTGGACGCCAGGGAGGCGACAACGAAGCCTGGCACCACCCGAGAGC GGCGCAGCATAGGCATCCCCGACCTGCTTTTTCATGAACTACCGGAAATA TCTTTGGATAGTGAAGCGCACTGGGCTGTGGATGCAGGCAATCGGGCAGA GGCCTGTCGCATCCCTCTGTTTTCCGAGGTGCTGGCGCTAGTCCCCCCCC ACAAGACCATGATAGTTGAAGTTAAGCAAAAGAGTGCGGTGCTTATCCGC AAGGTGCATGAATTAATCGTGGCGCGAGGCCGGCTGGAGCGAACCATCTG GTTCAGTCTGTCTGAGGATATAAATGCCGACCTCCGAGCTTACGATCCGT CAATACCCAATATTTCATCAGTCGTGGGCATGCTTAAGTGTATATTTTTT TACTACACGGGAATTCTACCGTTTGTCCGACTGAATGAGGACATACTGGG GATTCCAATTGATAGGGTGGACTACGCCAGAGTCAGAGAACAGAAAGCAC TGAAAGCTCTTCCTGACGCTGTCTGCGCCATTCTGGCCTTCGTGCTGGGC GGAAAGCCACCCTCAGCGCTCATCCCGCCTGGACTTTTTAAACATCTGCG TGCTCGAGGTATACCGATATTTTTCTTGGGGGTCaacgatgaagaggacc tCAAGGTTGCCGAAGTGGCGGGCTCCACCGCGGTTCTAACGGACAGGCCA CGATGGCTGAGCCAACGCATGATGGAGGGCAAAGTAGCGTTGAAGCAACT GTGAATGGAACTCACTGAAATCTTGGGCTCCGTGTCAAATGCCTCTGTAA TGATACATCTGATTGGTATGTACGTCACGTTTTGCATCGTAAGTATACTC CTTCACCactttcctgccctcctgcACCGTCCCAAAAAACGACTCTATGA ACCAGTCGTCCAGCCAGAGACCCTTGATCCGGTCAAAAGTAAAAGTTTAT GTTGTAAAGTATCAACGGGTACCTCGATTTCTGTTGCCATGAAGAGTAAT GTCGACCCAAGATTTCGTGTGCAGCACATCGCACACAGAGGCTCTCGGCT GGAGGGTCTACCGGAGAACACGCTGGCCTCATTCGCCCACGCTGTTGCCG CGGGCTCAGATGTCATCGAACTTGACGTGTGGTTAACCAAAGATGAGAAA GTGGTGGTGTTTCATGACGCGGATTTGGAGAGGATGTGCGGAGCACCGGC TTCAAGGGCAGCTCTCGCGACTGTGGACGCCAGGGAGGCGACAACGAAGC CTGGCACCACCCGAGAGCGGCGCAGCATAGGCATCCCCGACCTGCTTTTT CATGAACTACCGGAAATATCTTTGGATAGTGAAGCGCACTGGGCTGTGGA TGCAGGCAATCGGGCAGAGGCCTGTCGCATCCCTCTGTTTTCCGAGGTGC TGGCGCTAGTCCCCCCCCACAAGACCATGATAGTTGAAGTTAAGCAAAAG AGTGCGGTGCTTATCCGCAAGGTGCATGAATTAATCGTGGCGCGAGGCCG GCTGGAGCGAACCATCTGGTTCAGTCTGTCTGAGGATATAAATGCCGACC TCCGAGCTTACGATCCGTCAATACCCAATATTTCATCAGTCGTGGGCATG CTTAAGTGTATATTTTTTTACTACACGGGAATTCTACCGTTTGTCCGACT GAATGAGGACATACTGGGGATTCCAATTGATAGGGTGGACTACGCCAGAG TCAGAGAACAGAAAGCACTGAAAGCTCTTCCTGACGCTGTCTGCGCCATT CTGGCCTTCGTGCTGGGCGGAAAGCCACCCTCAGCGCTCATCCCGCCTGG ACTTTTTAAACATCTGCGTGCTCGAGGTATACCGATATTTTTCTTGGGGG TCaacgatgaagaggacctCAAGGTTGCCGAAGTGGCGGGCTCCACCGCG GTTCTAACGGACAGGCCACGATGGCTGAGCCAACGCATGATGGAGGGCAA AGTAGCGTTGAAGCAACTGTGA back to top
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