EWM28805.1, cds1994 (CDS) Nannochloropsis gaditana

Overview
NameEWM28805.1
Unique Namecds1994
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:661811..662219 -
Alignment locationCM002458.1:661222..661655 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28805.1
Productglutathione s-transferase
Orig transcript idgnl|cribi|Naga_100002g19.4924.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:661811..662219 -
CM002458.1supercontigCM002458.1:661222..661655 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR004045Glutathione_S-Trfase_N
IPR010987Glutathione-S-Trfase_C-like
IPR012336Thioredoxin-like_fold
Homology
BLAST of EWM28805.1 vs. NCBI_GenBank
Match: gi|585111228|gb|EWM28805.1| (glutathione s-transferase [Nannochloropsis gaditana])

HSP 1 Score: 574.704 bits (1480), Expect = 0.000e+0
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
Query:    1 MAVSARFRSRCGLAVALLTCGSFLTSAFPGSQPPTLPARPLAGRRPTFLSPRRSYRPQYTRTTFSSAFAAADNAALRNIPPSSHGYKPKVWAYYRSRSKIIEWYCQELGVDYEAVQVDMGAGQHKASDFVKNVNPFGKLPVITMADGTPLIESGAQLLYLADVFDPNVSTAEERGLASQWTHFANASLGPSIFMKEQREAGVMDKLFAVLNELLAESSYLQGERFGVGDVAVGSYLSYIPVFFPDQISLDAYPFLRAYINRITSRPAFKRTVGAPPPSTA 280
            MAVSARFRSRCGLAVALLTCGSFLTSAFPGSQPPTLPARPLAGRRPTFLSPRRSYRPQYTRTTFSSAFAAADNAALRNIPPSSHGYKPKVWAYYRSRSKIIEWYCQELGVDYEAVQVDMGAGQHKASDFVKNVNPFGKLPVITMADGTPLIESGAQLLYLADVFDPNVSTAEERGLASQWTHFANASLGPSIFMKEQREAGVMDKLFAVLNELLAESSYLQGERFGVGDVAVGSYLSYIPVFFPDQISLDAYPFLRAYINRITSRPAFKRTVGAPPPSTA
Sbjct:    1 MAVSARFRSRCGLAVALLTCGSFLTSAFPGSQPPTLPARPLAGRRPTFLSPRRSYRPQYTRTTFSSAFAAADNAALRNIPPSSHGYKPKVWAYYRSRSKIIEWYCQELGVDYEAVQVDMGAGQHKASDFVKNVNPFGKLPVITMADGTPLIESGAQLLYLADVFDPNVSTAEERGLASQWTHFANASLGPSIFMKEQREAGVMDKLFAVLNELLAESSYLQGERFGVGDVAVGSYLSYIPVFFPDQISLDAYPFLRAYINRITSRPAFKRTVGAPPPSTA 280          
BLAST of EWM28805.1 vs. NCBI_GenBank
Match: gi|553189318|ref|XP_005854977.1| (glutathione S-transferase [Nannochloropsis gaditana CCMP526] >gi|422294088|gb|EKU21388.1| glutathione S-transferase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 332.798 bits (852), Expect = 1.312e-113
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query:  119 MGAGQHKASDFVKNVNPFGKLPVITMADGTPLIESGAQLLYLADVFDPNVSTAEERGLASQWTHFANASLGPSIFMKEQREAGVMDKLFAVLNELLAESSYLQGERFGVGDVAVGSYLSYIPVFFPDQISLDAYPFLRAYINRITSRPAFKRTVGAPPPSTA 280
            MGAGQHKASDFVKNVNPFGKLPVITMADGTPLIESGAQLLYLADVFDPNVSTAEERGLASQWTHFANASLGPSIFMKEQREAGVMDKLFAVLNELLAESSYLQGERFGVGDVAVGSYLSYIPVFFPDQISLDAYPFLRAYINRITSRPAFKRTVGAPPPSTA
Sbjct:    1 MGAGQHKASDFVKNVNPFGKLPVITMADGTPLIESGAQLLYLADVFDPNVSTAEERGLASQWTHFANASLGPSIFMKEQREAGVMDKLFAVLNELLAESSYLQGERFGVGDVAVGSYLSYIPVFFPDQISLDAYPFLRAYINRITSRPAFKRTVGAPPPSTA 162          
BLAST of EWM28805.1 vs. NCBI_GenBank
Match: gi|504940610|ref|WP_015127712.1| (glutathione S-transferase [Calothrix sp. PCC 7507] >gi|427349168|gb|AFY31892.1| Glutathione S-transferase domain protein [Calothrix sp. PCC 7507])

HSP 1 Score: 175.252 bits (443), Expect = 3.590e-51
Identity = 89/186 (47.85%), Postives = 126/186 (67.74%), Query Frame = 0
Query:   89 KVWAYYRSRSKIIEWYCQELGVDYEAVQVDMGAGQHKASDFVKNVNPFGKLPVITMADGTPLIESGAQLLYLADVFDPNVSTAEERGLASQWTHFANASLGPSIFMKEQREAGVMDKLFAVLNELLAESSYLQGERFGVGDVAVGSYLSYIPVFFPDQISLDAYPFLRAYINRITSRPAFKRTVGA 274
            K++   RSR+ I++WY +ELGV YE V++DM AG+H+  D++  +NP GK+P I   D   L ESGA LLYLAD +  N ++ EER +A+QWT FANA+LGP IF +  RE   M +L A LNE+ A   +L G+ F V DVAVGS L+YIP+    ++ L AYP +  Y+ R++ RPAF++++G 
Sbjct:    3 KLYGGTRSRASIVQWYLEELGVPYEFVKLDMQAGEHRQPDYL-TINPIGKVPAIIDGD-LRLWESGAILLYLADKYGKNATSPEERAIAAQWTLFANATLGPGIFGEATREKE-MPRLLAPLNEIFARQPFLLGDEFTVADVAVGSILTYIPIML--KLDLSAYPAVLEYMTRVSERPAFQKSIGG 183          
BLAST of EWM28805.1 vs. NCBI_GenBank
Match: gi|950362629|emb|CEJ44873.1| (Glutathione S-transferase (Glutathi one S-transferase-like protein) [Chrysosporum ovalisporum])

HSP 1 Score: 169.859 bits (429), Expect = 4.259e-49
Identity = 87/186 (46.77%), Postives = 123/186 (66.13%), Query Frame = 0
Query:   89 KVWAYYRSRSKIIEWYCQELGVDYEAVQVDMGAGQHKASDFVKNVNPFGKLPVITMADGTPLIESGAQLLYLADVFDPNVSTAEERGLASQWTHFANASLGPSIFMKEQREAGVMDKLFAVLNELLAESSYLQGERFGVGDVAVGSYLSYIPVFFPDQISLDAYPFLRAYINRITSRPAFKRTVGA 274
            K++   RSR+ I++WY +ELGVDYE V +DM AG+HK  +++K +NP GK+P I   D   L ESGA LLYL+D +     + ++RG+ SQW  FANA+LGP IF++  RE   M +L   LNE+    S+L G+ F V DVAVGS L+YIP+    ++ L AYP +  YI RI+  PAF++++G 
Sbjct:    3 KLYGGTRSRASIVQWYLEELGVDYEFVMLDMQAGEHKQPEYLK-INPMGKVPAIVDGD-LHLWESGAILLYLSDKYGKTSLSPQQRGIFSQWVLFANATLGPGIFIEANRERE-MPRLLTPLNEIFGRQSFLLGDEFTVADVAVGSILAYIPIML--KLDLSAYPAVLNYIQRISESPAFQKSIGG 183          
BLAST of EWM28805.1 vs. NCBI_GenBank
Match: gi|738037671|ref|WP_035996567.1| (glutathione S-transferase [Leptolyngbya sp. JSC-1])

HSP 1 Score: 168.703 bits (426), Expect = 1.169e-48
Identity = 90/186 (48.39%), Postives = 126/186 (67.74%), Query Frame = 0
Query:   89 KVWAYYRSRSKIIEWYCQELGVDYEAVQVDMGAGQHKASDFVKNVNPFGKLPVITMADGTPLIESGAQLLYLADVFDPNVSTAEERGLASQWTHFANASLGPSIFMKEQREAGVMDKLFAVLNELLAESSYLQGERFGVGDVAVGSYLSYIPVFFPDQISLDAYPFLRAYINRITSRPAFKRTVGA 274
            K++   RSR+ I+ WY +ELG+ YE V +DM AG+H+  +++  +NP GK+P I  +D   L ESGA LLYLA+ +   + T E+R  A+QW  FANA+LGP IF++  RE   M +LF  LNE L +  YLQGE F V D AVGS L+Y+P+    QI+ + YP L+AY+ R+T RPAF++T+GA
Sbjct:    3 KLYGGARSRASIVRWYLEELGIPYEYVVLDMAAGEHRQPEYLA-INPMGKVPAIVDSDFR-LWESGAILLYLAEKYGAPM-TLEQRAEANQWILFANATLGPGIFVEASREKE-MPRLFGPLNERLQQQPYLQGEEFTVVDAAVGSMLAYMPLML--QINFEGYPALQAYVKRLTERPAFQKTIGA 182          
BLAST of EWM28805.1 vs. NCBI_GenBank
Match: gi|1214780735|ref|WP_088891889.1| (glutathione S-transferase [Leptolyngbya ohadii])

HSP 1 Score: 168.703 bits (426), Expect = 1.226e-48
Identity = 87/186 (46.77%), Postives = 123/186 (66.13%), Query Frame = 0
Query:   89 KVWAYYRSRSKIIEWYCQELGVDYEAVQVDMGAGQHKASDFVKNVNPFGKLPVITMADGTPLIESGAQLLYLADVFDPNVSTAEERGLASQWTHFANASLGPSIFMKEQREAGVMDKLFAVLNELLAESSYLQGERFGVGDVAVGSYLSYIPVFFPDQISLDAYPFLRAYINRITSRPAFKRTVGA 274
            K++   RSR+ I++WY +ELGV YE V +DM AGQHK  DF+  +NPFGK+P I   +G  L ESGA LLYL++ +D  +ST E+R   +QW  FANA+LGP IF++  RE   M +L A LN++  +  +L GE+F   DVAVGS L+Y+P+    +I  + YP +  Y+ RI  RP F++T+G 
Sbjct:    3 KLYGGARSRASIVQWYLEELGVPYEYVLLDMQAGQHKEPDFLA-INPFGKVPAIE-ENGYRLWESGAILLYLSEKYDTAISTPEQRATIAQWVLFANATLGPGIFVEASRERE-MPRLLAPLNQIFEQQPFLLGEQFSAADVAVGSMLAYMPLML--KIGFEDYPGIADYLKRIAERPGFQKTLGG 183          
BLAST of EWM28805.1 vs. NCBI_GenBank
Match: gi|1208982566|ref|WP_088243699.1| (glutathione S-transferase [Calothrix rhizosoleniae])

HSP 1 Score: 166.777 bits (421), Expect = 6.314e-48
Identity = 89/187 (47.59%), Postives = 126/187 (67.38%), Query Frame = 0
Query:   89 KVWAYYRSRSKIIEWYCQELGVDYEAVQVDMGAGQHKASDFVKNVNPFGKLPVITMADGT-PLIESGAQLLYLADVFDPNVSTAEERGLASQWTHFANASLGPSIFMKEQREAGVMDKLFAVLNELLAESSYLQGERFGVGDVAVGSYLSYIPVFFPDQISLDAYPFLRAYINRITSRPAFKRTVGA 274
            K++   RSR+ II+WY +EL V YE +Q+DM AG+H+   F+  +NP GK+P I   DG   L ESGA LLYLAD +   VS++EER   +QW+ FANA+LGP +F++  RE   M +L A L+E+ ++  +L G+ F V DVAVGSYL+YIP+    ++ L  YP +  Y+ RI  RPAF++T+GA
Sbjct:    3 KLYGGARSRASIIQWYLEELAVPYEYIQLDMEAGEHRQQIFL-GINPMGKVPAIV--DGELKLWESGAILLYLADKYG-GVSSSEERAQGAQWSLFANATLGPGVFVEASRERE-MPRLMAPLDEIFSKQPFLLGDSFSVADVAVGSYLNYIPILL--KLDLSDYPHVMKYMQRIAERPAFQKTIGA 182          
BLAST of EWM28805.1 vs. NCBI_GenBank
Match: gi|499561826|ref|WP_011242609.1| (MULTISPECIES: glutathione S-transferase [Synechococcus] >gi|56685263|dbj|BAD78485.1| glutathione S-transferase [Synechococcus elongatus PCC 6301] >gi|81168946|gb|ABB57286.1| glutathione S-transferase [Synechococcus elongatus PCC 7942] >gi|745802934|gb|AJD58201.1| glutathione S-transferase [Synechococcus sp. UTEX 2973])

HSP 1 Score: 166.007 bits (419), Expect = 1.361e-47
Identity = 85/185 (45.95%), Postives = 126/185 (68.11%), Query Frame = 0
Query:   89 KVWAYYRSRSKIIEWYCQELGVDYEAVQVDMGAGQHKASDFVKNVNPFGKLPVITMADGTPLIESGAQLLYLADVFDPNVSTAEERGLASQWTHFANASLGPSIFMKEQREAGVMDKLFAVLNELLAESSYLQGERFGVGDVAVGSYLSYIPVFFPDQISLDAYPFLRAYINRITSRPAFKRTVG 273
            K++   R+R+ ++ WY +ELG  YE+V VDM AG+H+   F+ ++NPFGK+P + + D   L ESGA LLYLA+ F   + T ++R +A+QW  FANA+LGP +F++  R A    +L   LN LL++  YL  +R  V DVAVGSYL+Y+P+FFPD   L  YP ++ YI R+T RPA+++++G
Sbjct:    3 KLYGSARTRASLVAWYLEELGQPYESVAVDMAAGEHRQPTFL-SLNPFGKVPAL-VDDAFTLWESGAILLYLAEKFG-ELQTPQDRAIAAQWVLFANATLGPGLFVEANR-AKEAPRLLGSLNTLLSQREYLVSDRLSVSDVAVGSYLAYVPMFFPD-FDLSPYPAVQDYIRRLTQRPAYQQSIG 182          
BLAST of EWM28805.1 vs. NCBI_GenBank
Match: gi|654351364|ref|WP_027844554.1| (glutathione S-transferase [Mastigocoleus testarum] >gi|959132278|gb|KST67441.1| glutathione S-transferase [Mastigocoleus testarum BC008])

HSP 1 Score: 165.622 bits (418), Expect = 2.288e-47
Identity = 86/186 (46.24%), Postives = 120/186 (64.52%), Query Frame = 0
Query:   89 KVWAYYRSRSKIIEWYCQELGVDYEAVQVDMGAGQHKASDFVKNVNPFGKLPVITMADGTPLIESGAQLLYLADVFDPNVSTAEERGLASQWTHFANASLGPSIFMKEQREAGVMDKLFAVLNELLAESSYLQGERFGVGDVAVGSYLSYIPVFFPDQISLDAYPFLRAYINRITSRPAFKRTVGA 274
            K++   RSR+ I++WY +EL + YE V +DM +G+H+  +++K +NP GK+P I   D   L ESGA LLYLAD +D + ++AE+R   SQW  FANASLGP IF++  RE   M +L   L E+ A+  ++ G  F V D AVGS LSYIP+    ++ L  YP +  YI  I+ RPAFK T+GA
Sbjct:    3 KLYGAARSRASIVKWYLEELEIPYEFVNLDMQSGEHRQPEYLK-INPIGKVPAIVDGD-LKLWESGAILLYLADKYDKSATSAEKRAEYSQWVLFANASLGPGIFIEANRERE-MSRLMTPLEEIFAKQPFVLGNEFTVADAAVGSLLSYIPIML--KLDLSEYPHVLNYIKSISERPAFKNTIGA 183          
BLAST of EWM28805.1 vs. NCBI_GenBank
Match: gi|1056308246|ref|WP_067765172.1| (glutathione S-transferase [Nostoc sp. NIES-3756] >gi|953509348|dbj|BAT52036.1| glutathione S-transferase [Nostoc sp. NIES-3756])

HSP 1 Score: 165.236 bits (417), Expect = 2.494e-47
Identity = 86/178 (48.31%), Postives = 116/178 (65.17%), Query Frame = 0
Query:   96 SRSKIIEWYCQELGVDYEAVQVDMGAGQHKASDFVKNVNPFGKLPVITMADGTPLIESGAQLLYLADVFDPNVSTAEERGLASQWTHFANASLGPSIFMKEQREAGVMDKLFAVLNELLAESSYLQGERFGVGDVAVGSYLSYIPVFFPDQISLDAYPFLRAYINRITSRPAFKRTVG 273
            SR+ I++WY +EL V YE V +DM AG+H++ +++K +NPFGK+P I   D   L ESGA LLYL D +     T EERG+ SQW  FANA+LGP +F++  RE   M +L   LNE+     YL G  F V DVAVGS L+YIP     ++ L AYP +  YI +IT RPAF++++G
Sbjct:   10 SRASIVKWYLEELEVSYEFVLLDMQAGEHRSPEYIK-INPFGKVPAIVDGD-FQLWESGAILLYLHDKYGKTSVTPEERGILSQWVLFANATLGPGVFVEANREKE-MPRLLTPLNEIFQHQPYLLGNEFSVADVAVGSMLAYIPTML--KLDLSAYPAVVNYIKQITERPAFQKSIG 182          
The following BLAST results are available for this feature:
BLAST of EWM28805.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111228|gb|EWM28805.1|0.000e+0100.00glutathione s-transferase [Nannochloropsis gaditan... [more]
gi|553189318|ref|XP_005854977.1|1.312e-113100.00glutathione S-transferase [Nannochloropsis gaditan... [more]
gi|504940610|ref|WP_015127712.1|3.590e-5147.85glutathione S-transferase [Calothrix sp. PCC 7507]... [more]
gi|950362629|emb|CEJ44873.1|4.259e-4946.77Glutathione S-transferase (Glutathi one S-transfer... [more]
gi|738037671|ref|WP_035996567.1|1.169e-4848.39glutathione S-transferase [Leptolyngbya sp. JSC-1][more]
gi|1214780735|ref|WP_088891889.1|1.226e-4846.77glutathione S-transferase [Leptolyngbya ohadii][more]
gi|1208982566|ref|WP_088243699.1|6.314e-4847.59glutathione S-transferase [Calothrix rhizosoleniae... [more]
gi|499561826|ref|WP_011242609.1|1.361e-4745.95MULTISPECIES: glutathione S-transferase [Synechoco... [more]
gi|654351364|ref|WP_027844554.1|2.288e-4746.24glutathione S-transferase [Mastigocoleus testarum]... [more]
gi|1056308246|ref|WP_067765172.1|2.494e-4748.31glutathione S-transferase [Nostoc sp. NIES-3756] >... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2002rna2002Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications