EWM28681.1, cds1973 (CDS) Nannochloropsis gaditana

Overview
NameEWM28681.1
Unique Namecds1973
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:614282..614642 -
Alignment locationCM002458.1:613731..614082 -
Alignment locationCM002458.1:612748..613603 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28681.1
ProductProtein of unknown function DUF81
Orig transcript idgnl|cribi|Naga_100002g40.4800.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:614282..614642 -
CM002458.1supercontigCM002458.1:613731..614082 -
CM002458.1supercontigCM002458.1:612748..613603 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR002781TM_pro_TauE-like
Homology
BLAST of EWM28681.1 vs. NCBI_GenBank
Match: gi|585111104|gb|EWM28681.1| (Protein of unknown function DUF81 [Nannochloropsis gaditana])

HSP 1 Score: 1071.61 bits (2770), Expect = 0.000e+0
Identity = 522/522 (100.00%), Postives = 522/522 (100.00%), Query Frame = 0
Query:    1 MGCSEREKQESPSHTNLPHQIDVLYSADEIDHRNVPPMGNFFNLSHDRIEGVSWYANDRIQGLLTEAHVGKADSFQSEEASAGSQRGGTQHHPFWPLQRNDVIGLFLTAVGLMIAAGGGIGGGGILVPIFILVMGFSPKYAIPLSNVTILGGSIMNMVMNVPKRHPSADRPLVDWDLILIMEPLTIGGALAGSFLNKILPEWLLVICLVILLTYTAQSTLKKGLRVYQKESQAMAQASRPQSKQLKDLAAAEKNYEDDEEKTLLLSPDEYENPQDNIAKADLQAILDEERGTPWVKVRLLIFCFLVVLVLNIFKGGGSFSSPLGVECGSFAFWFLTSMVFAWVVCISLYVRADLIKMYYLKAKIGYKYAKGDIEWNEWATIKYPCVCFFAGFFAGMFGVGGGIVKGPLMLEMGVDPQVAAASSACMILFTSFTATTSFYIFDLLIYDYAVWLFIIGFLFTSVGQYGLSYLMKRYNRNSYIIFSIGAVVGLSALLMGLQSIISLFSGPGSGGKAGGAICDAAE 522
            MGCSEREKQESPSHTNLPHQIDVLYSADEIDHRNVPPMGNFFNLSHDRIEGVSWYANDRIQGLLTEAHVGKADSFQSEEASAGSQRGGTQHHPFWPLQRNDVIGLFLTAVGLMIAAGGGIGGGGILVPIFILVMGFSPKYAIPLSNVTILGGSIMNMVMNVPKRHPSADRPLVDWDLILIMEPLTIGGALAGSFLNKILPEWLLVICLVILLTYTAQSTLKKGLRVYQKESQAMAQASRPQSKQLKDLAAAEKNYEDDEEKTLLLSPDEYENPQDNIAKADLQAILDEERGTPWVKVRLLIFCFLVVLVLNIFKGGGSFSSPLGVECGSFAFWFLTSMVFAWVVCISLYVRADLIKMYYLKAKIGYKYAKGDIEWNEWATIKYPCVCFFAGFFAGMFGVGGGIVKGPLMLEMGVDPQVAAASSACMILFTSFTATTSFYIFDLLIYDYAVWLFIIGFLFTSVGQYGLSYLMKRYNRNSYIIFSIGAVVGLSALLMGLQSIISLFSGPGSGGKAGGAICDAAE
Sbjct:    1 MGCSEREKQESPSHTNLPHQIDVLYSADEIDHRNVPPMGNFFNLSHDRIEGVSWYANDRIQGLLTEAHVGKADSFQSEEASAGSQRGGTQHHPFWPLQRNDVIGLFLTAVGLMIAAGGGIGGGGILVPIFILVMGFSPKYAIPLSNVTILGGSIMNMVMNVPKRHPSADRPLVDWDLILIMEPLTIGGALAGSFLNKILPEWLLVICLVILLTYTAQSTLKKGLRVYQKESQAMAQASRPQSKQLKDLAAAEKNYEDDEEKTLLLSPDEYENPQDNIAKADLQAILDEERGTPWVKVRLLIFCFLVVLVLNIFKGGGSFSSPLGVECGSFAFWFLTSMVFAWVVCISLYVRADLIKMYYLKAKIGYKYAKGDIEWNEWATIKYPCVCFFAGFFAGMFGVGGGIVKGPLMLEMGVDPQVAAASSACMILFTSFTATTSFYIFDLLIYDYAVWLFIIGFLFTSVGQYGLSYLMKRYNRNSYIIFSIGAVVGLSALLMGLQSIISLFSGPGSGGKAGGAICDAAE 522          
BLAST of EWM28681.1 vs. NCBI_GenBank
Match: gi|1072224682|gb|OEU09431.1| (hypothetical protein FRACYDRAFT_248281 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 431.024 bits (1107), Expect = 1.894e-143
Identity = 234/429 (54.55%), Postives = 307/429 (71.56%), Query Frame = 0
Query:  104 GLFLTAVGLMIAAGGGIGGGGILVPIFILVMGFSPKYAIPLSNVTILGGSIMNMVMNVPKRHPSADRPLVDWDLILIMEPLTIGGALAGSFLNKILPEWLLVICLVILLTYTAQSTLKKGLRVYQKESQAM-AQASRP---QSKQLKDLAAAEKNYEDDEEKTLLLSP---DEYENPQ---DNIAKAD------LQAILDEERGTPWVKVRLLIFCFLVVLVLNIFKGGGSFSSPLGVECGSFAFWFLTSMVFAWVVCISLYVRADLIKMYYLKAKIGYKYAKGDIEWNEWATIKYPCVCFFAGFFAGMFGVGGGIVKGPLMLEMGVDPQVAAASSACMILFTSFTATTSFYIFDLLIYDYAVWLFIIGFLFTSVGQYGLSYLMKRYNRNSYIIFSIGAVVGLSALLMGLQSIISLFSGP--GSGGKAG 514
            G  L   GLM+AAGGGIGGGGILVPI+ILVMGFSPK+ IPLSNVT+ GG+  NMV+N+ KRHP ADRPL++WDLIL+MEPLTI GALAG+FLNKILPE  L + LV+LL++TA ++LKK +++Y+ ES+ +  Q  +P   +  +L  ++  EK+ + ++    LL      E ENP    D +   D      L+ I+DEERG P   V +L+  F+VVL +N+ KGGG+F SP+G+ CGS  FW   +++  W++ IS+Y RA L++ + LK K+GYKY +GDI+W++ +TI YP +C  AGFFAGMFG+GGGIVKGPLML M V P VA+ASSACMILFTSFTATTSF++F LL   Y    F IGF+ T  GQ GL+ LM++Y RNSYI+FSIG  V LSA+LM +QS++S+  G    SGG  G
Sbjct:   54 GFSLAICGLMLAAGGGIGGGGILVPIYILVMGFSPKHGIPLSNVTVFGGACANMVLNIRKRHPLADRPLINWDLILVMEPLTIAGALAGAFLNKILPEQFLTMMLVLLLSFTAYNSLKKAMKMYKAESRKLREQGLKPDGSKESELTKISQEEKDKDMNQAGDELLEDMDLQEGENPGGVGDGLPTDDGDDAHILETIIDEERGVPMFNVNILVGLFVVVLAINLLKGGGAFPSPIGIVCGSQNFWIANAIMLGWIILISIYCRAYLVQRFELKHKVGYKYIEGDIQWDDRSTIIYPGICCLAGFFAGMFGIGGGIVKGPLMLAMEVHPAVASASSACMILFTSFTATTSFFVFGLLDPQYGPVCFGIGFIATYFGQIGLAILMRKYQRNSYIVFSIGGTVLLSAILMTVQSLLSIAEGEHHSSGGICG 482          
BLAST of EWM28681.1 vs. NCBI_GenBank
Match: gi|219112381|ref|XP_002177942.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410827|gb|EEC50756.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 424.091 bits (1089), Expect = 1.159e-138
Identity = 247/463 (53.35%), Postives = 318/463 (68.68%), Query Frame = 0
Query:   84 SQRGGTQHHPFW--------PLQRNDVIGLFLTAVGLMIAAGGGIGGGGILVPIFILVMGFSPKYAIPLSNVTILGGSIMNMVMNVPKRHPSADRPLVDWDLILIMEPLTIGGALAGSFLNKILPEWLLVICLVILLTYTAQSTLKKGLRVYQKESQAMAQASR------PQSKQLKDLAAAEKNYEDDEEKTLLLSPDEY----------------ENPQDNIAKADLQAILDEERGTPWVKVRLLIFCFLVVLVLNIFKGGGSFSSPLGVECGSFAFWFLTSMVFAWVVCISLYVRADLIKMYYLKAKIGYKYAKGDIEWNEWATIKYPCVCFFAGFFAGMFGVGGGIVKGPLMLEMGVDPQVAAASSACMILFTSFTATTSFYIFDLLIYDYAVWLFIIGFLFTSVGQYGLSYLMKRYNRNSYIIFSIGAVVGLSALLMGLQSIISLFSGPG--SGGKAG 514
            S+   +QH P +        PL R+D IG FL  +GLM+AAGGGIGGGGILVP++ILVMGF+PK+AIPLSNVT+LGG++ N ++N  KRHP ADRPLVDWDLIL+MEPLTI GAL G+FLNK+LPE LL + LV+LL+ TA ++L K L++Y +ES+AMA A         +  +L  +A  E   + DE   +LL   E                 E P  ++ +A+L  +L+EE  TP   + +L+  F+VVL +N+ KGGG+F SPLG+ CGS AFW    ++ AW+  IS+ +RA L++ +  K ++ + Y +GDI W+  ATI YP VC  AGFFAGMFGVGGGIVKGPLML MGV P V++ASSACMILFTSFTATTSF +F LL++DYA     IGF+ T  GQ GLSYLM+R  RNSYI FSIGAVV LSA LM +QS++S+ +G    SGG  G
Sbjct:  180 SRSPHSQHKPIYDEAHPALFPLSRSDQIGFFLATLGLMVAAGGGIGGGGILVPVYILVMGFTPKHAIPLSNVTVLGGAVANTILNARKRHPLADRPLVDWDLILVMEPLTIAGALLGAFLNKVLPELLLTVLLVLLLSVTAYTSLTKALKLYARESRAMAAAQGLVRVDGTKESELTVMARLEDQDDHDEAAEVLLENMERDDDDDESSSDDDMKSVELPASSL-QAELDQLLEEECTTPMANISILVTMFIVVLTINVLKGGGAFPSPLGIRCGSRAFWIANLVMLAWIGIISVGIRAYLVRRFEQKRRLSFPYVEGDIRWDARATIVYPVVCCMAGFFAGMFGVGGGIVKGPLMLAMGVHPAVSSASSACMILFTSFTATTSFVVFGLLVWDYAYVCMAIGFVATFAGQVGLSYLMRRAQRNSYIAFSIGAVVLLSAFLMTIQSLLSMAAGEKHHSGGICG 641          
BLAST of EWM28681.1 vs. NCBI_GenBank
Match: gi|223992571|ref|XP_002285969.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977284|gb|EED95610.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 415.231 bits (1066), Expect = 3.047e-136
Identity = 240/485 (49.48%), Postives = 315/485 (64.95%), Query Frame = 0
Query:   89 TQHHPFWPLQRNDVIGLFLTAVGLMIAAGGGIGGGGILVPIFILVMGFSPKYAIPLSNVTILGGSIMNMVMNVPKRHPSADRPLVDWDLILIMEPLTIGGALAGSFLNKILPEWLLVICLVILLTYTAQSTLKKGLRVYQKESQAMAQASRPQSK---------QLKDLAAAEKNY-------------------EDDEEKTLLLSPDEYENPQ-----------------------DNIAKADLQAILDEERGTPWVKVRLLIFCFLVVLVLNIFKGGGSFSSPLGVECGSFAFWFLTSMVFAWVVCISLYVRADLIKMYYLKAKIGYKYAKGDIEWNEWATIKYPCVCFFAGFFAGMFGVGGGIVKGPLMLEMGVDPQVAAASSACMILFTSFTATTSFYIFDLLIYDYAVWLFIIGFLFTSVGQYGLSYLMKRYNRNSYIIFSIGAVVGLSALLMGLQSIISLFSGPGSGGKAGGAICDAAE 522
            T H P  PL  +D  G F   +GLMIAAGGGIGGGG+LVPI+IL+MGFSPK+AIPLSN+T+ GG++ N ++NV KRHP ADRPLVDWDLIL+MEPLTI GAL G+FLNK+LPE +LV+ LV LL++T+ +TLKK +R+Y+ ES+A+ +A R   K         +L  LA   +                      DD+++T   + DE EN Q                       D   K +L  IL EER  P   V++L+  F V+L +NI KGGG+F SPLG+ CGS +FW    ++  W++ +S++ R+ L++ Y +K ++G+ Y +GDI W+  AT+ YP VC  AGFFAGMFGVGGGIVKGPLML MGV P+V++ASSACMILFTSFTATTSF +F LL  DYA     +GF+ T VGQ GL YLM+++ RNSYI FSIG +V LSA LM +QS++S+      G KA   +C   +
Sbjct:   84 THHKPLLPLDSSDYYGFFFATIGLMIAAGGGIGGGGVLVPIYILIMGFSPKHAIPLSNITVFGGAVANTILNVRKRHPLADRPLVDWDLILVMEPLTIAGALIGAFLNKLLPEAVLVLSLVALLSFTSYTTLKKAIRMYKAESKAL-EAQRGVRKVRGDGTVESELTRLAREMEEDEEDEEEEGCTVGLLDAAITTDDQDETESDANDE-ENGQPTSSNTDTTNDNNDDESTFSTATDLKNKEELSKILSEERTVPKGNVQVLLVTFTVILFINIMKGGGAFPSPLGIRCGSPSFWVSNGIMIGWILLVSVFARSYLVRRYEIKERVGFPYVEGDIRWDGRATVVYPLVCTAAGFFAGMFGVGGGIVKGPLMLAMGVHPKVSSASSACMILFTSFTATTSFVVFGLLDMDYATVCMTLGFVATLVGQIGLFYLMEKFQRNSYIAFSIGGIVLLSAFLMTIQSLLSM--ADSGGPKAPQGLCTGKQ 564          
BLAST of EWM28681.1 vs. NCBI_GenBank
Match: gi|1210517804|dbj|GAX23205.1| (hypothetical protein FisN_21Hh114 [Fistulifera solaris])

HSP 1 Score: 405.601 bits (1041), Expect = 3.083e-131
Identity = 232/443 (52.37%), Postives = 304/443 (68.62%), Query Frame = 0
Query:   90 QHHPFWPLQRNDVIGLFLTAVGLMIAAGGGIGGGGILVPIFILVMGFSPKYAIPLSNVTILGGSIMNMVMNVPKRHPSADRPLVDWDLILIMEPLTIGGALAGSFLNKILPEWLLVICLVILLTYTAQSTLKKGLRVYQKESQAMAQASRPQSKQLKD--------------LAAAEKNYEDDEEKTLLLSPDEYENPQDNIAKADLQAILDEERGTPWVKVRLLIFCFLVVLVLNIFKGGGSFSSPLGVECGSFAFWFLTSMVFAWVVCISLYVRADLIKMYYLKAKIGYKYAKGDIEWNEWATIKYPCVCFFAGFFAGMFGVGGGIVKGPLMLEMGVDPQVAAASSACMILFTSFTATTSFYIFDLLIYDYAVWLFIIGFLFTSVGQYGLSYLMKRYNRNSYIIFSIGAVVGLSALLMGLQSIISLFSGPGSGGKAGGAIC 518
            +H   +P    D  G  L  +GL++AAGGGIGGGGILVPI+ LV+ FSPK+AIPLSN+T+LGG++ N ++N  KRHP+ADRPL+DWD+IL+MEPLTI GAL G+ +NK+LPE LL + LV+LL  TAQ+TL K +++Y+KE+  M   S   +K ++D                   K  E DE + + +   E+E         +LQAIL+ ER      + LL+  F+VVL++N+ KGGG+F SPLG+ CGS AFW    ++ AW++ IS++ R  L+  Y  KA   Y Y  GDI W+E AT+ YP +C FAGFFAGMFGVGGGIVKGPLML MG+ P V++AS+ACMILFTSFTATTSF +F LL+YDYA+  F+IGFL T VGQ  L+Y+MKR  RNSYI FSIG VV +SA+LM +QS++S+    G    AGG IC
Sbjct:  234 EHKDLFPFNWADFWGFALATIGLLLAAGGGIGGGGILVPIYCLVLDFSPKHAIPLSNITVLGGALANTILNASKRHPTADRPLIDWDMILVMEPLTIAGALMGALINKVLPELLLAVLLVLLLAITAQNTLSKAIQLYRKETAQMNHESE-LTKLVEDQQRNDDDGDEEVDDENKDAKGDEPDESQMVTVMSKEHE---------ELQAILEYERHHSQHNIILLVVMFIVVLIINVSKGGGAFKSPLGITCGSSAFWMSNFLLLAWILAISIHARVVLLHKYERKAACNYVYQPGDIVWDERATVVYPIICTFAGFFAGMFGVGGGIVKGPLMLAMGIHPAVSSASTACMILFTSFTATTSFVVFGLLVYDYAIICFVIGFLATLVGQIALTYVMKRAGRNSYIAFSIGGVVLISAILMTIQSLLSI--AEGEKHHAGG-IC 663          
BLAST of EWM28681.1 vs. NCBI_GenBank
Match: gi|1210530877|dbj|GAX10417.1| (hypothetical protein FisN_21Lh114 [Fistulifera solaris])

HSP 1 Score: 399.053 bits (1024), Expect = 1.383e-128
Identity = 216/406 (53.20%), Postives = 281/406 (69.21%), Query Frame = 0
Query:  127 VPIFILVMGFSPKYAIPLSNVTILGGSIMNMVMNVPKRHPSADRPLVDWDLILIMEPLTIGGALAGSFLNKILPEWLLVICLVILLTYTAQSTLKKGLRVYQKESQAMAQAS---RPQSKQLKDLAAA-----------EKNYEDDEEKTLLLSPDEYENPQDNIAKADLQAILDEERGTPWVKVRLLIFCFLVVLVLNIFKGGGSFSSPLGVECGSFAFWFLTSMVFAWVVCISLYVRADLIKMYYLKAKIGYKYAKGDIEWNEWATIKYPCVCFFAGFFAGMFGVGGGIVKGPLMLEMGVDPQVAAASSACMILFTSFTATTSFYIFDLLIYDYAVWLFIIGFLFTSVGQYGLSYLMKRYNRNSYIIFSIGAVVGLSALLMGLQSIISLFSGPGSGGKAGGAIC 518
            VPI+ LV+ FSPK+AIPLSN+T+LGG++ N ++N PKRHPSADRPL+DWD+IL+MEPLTI GAL G+ +NK+LPE LL + LV+LL  TAQ+TL K +++Y+KE+  M Q S   +   +Q ++                K  E +E + + +   E+E         +LQAIL+ ER      + LL+  F+VVL++N  KGGG+F SPLG+ CGS AFW    ++ AW++ IS++ R  L+  Y  KA   Y Y  GDI W+E AT+ YP +C FAGFFAGMFGVGGGIVKGPLML MG+ P V++AS+ACMILFTSFTATTSF +F LL+YDYA+  FIIGFL T VGQ  LSY+MKR  RNSYI FSIG VV +SA+LM +QS++S+    G    AGG IC
Sbjct:  276 VPIYCLVLDFSPKHAIPLSNITVLGGALANTILNAPKRHPSADRPLIDWDMILVMEPLTIAGALVGALINKVLPELLLTVLLVLLLAITAQNTLSKAIQLYRKETAQMIQESELTKLVEEQQRNDDDGDEEDDDDENKDAKGDEPNESQMVTVMSKEHE---------ELQAILEHERHHSQHNIILLVVMFIVVLIINASKGGGAFKSPLGITCGSSAFWMSNFLLLAWILAISIHARVVLLHKYERKAACNYVYQPGDIVWDERATVVYPIICTFAGFFAGMFGVGGGIVKGPLMLAMGIHPAVSSASTACMILFTSFTATTSFVVFGLLVYDYAIICFIIGFLATLVGQIALSYVMKRAGRNSYIAFSIGGVVLVSAILMTIQSLLSI--AEGEKHHAGG-IC 669          
BLAST of EWM28681.1 vs. NCBI_GenBank
Match: gi|223998204|ref|XP_002288775.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220975883|gb|EED94211.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 342.043 bits (876), Expect = 3.494e-110
Identity = 204/397 (51.39%), Postives = 273/397 (68.77%), Query Frame = 0
Query:  101 DVIGLFLTAVGLMIAAGGGIGGGGILVPIFILVMGFSPKYAIPLSNVTILGGSIMNMVMNVPKRHPSADRPLVDWDLILIMEPLTIGGALAGSFLNKILPEWLLVICLVILLTYTAQSTLKKGLRVYQKESQAMAQASRPQSKQLKDLAAAEKNYEDDEEKTLLLSPDEYENPQDNIAKADLQAILDEERGTPWVKVRLLIFCFLVVLVLNIFKGGGSFSSPLGVECGSFAFWFLTSMVFAWVVCISLYVRADLIKMYYLKAKIGYKYAKGDIEWNEWATIKYPCVCFFAGFFAGMFGVGGGIVKGPLMLEMGVDPQVAAASSACMILFTSFTATTSFYIFDLLIYDYAVWLFIIGFLFTSVGQYGLSYLMKRYNRNSYIIFSIGAVVGLSALLMGL 497
            D +G F  A+GL++AAGGGIGGGGILVP++IL++ F PK+AIPLSNVT+ GG++ N + NV KRHP ADRPL+DWDLIL+MEP T+ GAL G+ LNKIL E L+ + LV+LL++TA  TLKK  ++Y KE++ + +     S  L++    + ++ DDEE           N +D + +        EE G       L    F+VVL +NI KGGG F+SP+G++CGS AFW   +++  W++ ISL  R  LIK   LK   G++Y K D+ W++ +TI YP     AGF AGMFG+GGGIVKGPLM+ MGV P VA+A+SACMILFTSFTATT+F ++ LL++DYA+   I+GF+ T+VGQ   + L+K+  RNSYI FSIG VV LSALLM L
Sbjct:    1 DFLGFFFAALGLVLAAGGGIGGGGILVPVYILILDFLPKHAIPLSNVTVFGGAVANTIFNVRKRHPLADRPLIDWDLILVMEPSTLLGALVGANLNKILSETLIAVMLVVLLSFTAYGTLKKAGKMYDKETEDL-KNEWSYSDGLREHLVNDYSHMDDEEGR---KGANDNNKEDTVTEY-------EEFGMHEAN-SLDRLMFVVVLAINILKGGGGFASPVGIKCGSAAFWISQALLLVWIIGISLVARRQLIKDTALKMGAGFRYLKEDMIWDDKSTIIYPLFSTVAGFCAGMFGIGGGIVKGPLMIMMGVHPAVASATSACMILFTSFTATTTFAVYGLLVHDYAIACVILGFVATAVGQTITTRLLKKSRRNSYIAFSIGFVVLLSALLMTL 385          
BLAST of EWM28681.1 vs. NCBI_GenBank
Match: gi|397643932|gb|EJK76166.1| (hypothetical protein THAOC_02088 [Thalassiosira oceanica])

HSP 1 Score: 317.775 bits (813), Expect = 7.142e-99
Identity = 218/489 (44.58%), Postives = 294/489 (60.12%), Query Frame = 0
Query:   89 TQHHPFWPLQRNDVIGLFLTAVGLMIAAGGGIGGGGILVPIFILVMGFSPKYAIPLSNVTILGGSIMNMVMNVPKRHPSADRPLVDWDLILIMEPLTIGGALAGSFLNKILPEWLLVICLVILLTYTAQSTLKKGLRVYQKESQAMAQAS-------------RPQSKQ-------LKDLAAAEKNYEDDEEKT--LLLSPDEYENPQDNIAKADL-----------------------------------QAILDEERGTPWVKVRLLIFCFLVVLVLNIFKGGGSFSSPLGVECGSFAFWFLTSMVFAWVVCISLYVRADLIKMYYLKAKIGYKYAKGDIEWNEWATIKYPCVCFFAGFFAGMFGVGGGIVKGPLMLEMGVDPQVAAASSACMILFTSFTATTSFYIFDLLIYDYAVWLFIIGFLFTSVGQYGLSYLMKRYNRNSYIIFSIGAVVGLSALLMGLQSIISLFSGPGSGGKAGGAICDA 520
            + H    PLQ ND IGL L  +GL++AAGGGIGGGGILVPI+IL++ F PK+AIPLSNVT+ GGSI N ++N  KRHP ADRPL+DWDLI++MEP T+ GAL G+ LNK+LPE  + I LV+LL YT+ +TLKK   +YQKE+  +   +             + +S+        L D     ++ + D   T  + LS +E   P D     DL                                   Q ILDEE+      + L+   F+VVL +NI KGGG+F SPLG+ECGS +FW    ++  W+  +S   R  L+K    K   G+ Y   DI WN   TI YP +   AG  AG+FG+GGGI+KGPLM+ +GV P VA+A+SACMILFTSFTATT+F ++ L++ DYA+   I+GF+ T VGQ  ++ ++++ NR+SYI +SIG VV LSA+LM LQS++ L S  G   + GG ICD+
Sbjct:   42 SDHDRLIPLQANDYIGLTLAMIGLILAAGGGIGGGGILVPIYILILNFLPKHAIPLSNVTVFGGSIANTLLNWRKRHPVADRPLIDWDLIVVMEPPTLLGALIGANLNKLLPETAIAILLVVLLVYTSFNTLKKAHSMYQKETSEIKHRNINHRSVEPTAGLFKTESENGLEEYFLLNDHLRDGRDSDSDTSDTGNIGLSLNEIRYPGDVERDGDLRNVRLDEQSDEGVDEASQGSSTVESYTEFGHTLELQNILDEEKRPKKKNIALIATLFMVVLTINILKGGGAFESPLGIECGSASFWVAQILLLIWICVVSWIGRKMLLKSTAKKTDAGFAYLDEDIRWNGKKTIIYPMISTLAGVAAGLFGIGGGIIKGPLMIALGVHPAVASATSACMILFTSFTATTTFSVYGLMVRDYAIACSILGFVSTLVGQKVMNSILRKTNRSSYIAYSIGFVVLLSAILMALQSVLHLLSAEGGMSQFGG-ICDS 529          
BLAST of EWM28681.1 vs. NCBI_GenBank
Match: gi|1129164611|gb|OLP76855.1| (E3 ubiquitin-protein ligase Nedd-4, partial [Symbiodinium microadriaticum])

HSP 1 Score: 300.056 bits (767), Expect = 1.980e-91
Identity = 179/421 (42.52%), Postives = 254/421 (60.33%), Query Frame = 0
Query:   84 SQRGGTQHH--PFWPLQ-RNDVIGLFLTAVGLMIAAGGGIGGGGILVPIFILVMGFSPKYAIPLSNVTILGGSIMNMVMNVPKRHPSADRPLVDWDLILIMEPLTIGGALAGSFLNKILPEWLLVICLVILLTYTAQSTLKKGLRVYQKESQAMAQASRPQSKQLKDLAAAEKNYEDDEEKTLLLSPDEYENPQDNIAKADLQAILDEERGTPWVKVRLLIFCFLVVLVLNIFKGGGSFSSPLGVECGSFAFWFLTSMVFAWVVCISLYVRADLIKMYYLKAKIGYKYAKGDIEWNEWATIKYPCVCFFAGFFAGMFGVGGGIVKGPLMLEMGVDPQVAAASSACMILFTSFTATTSFYIFDLLIYDYAVWLFIIGFLFTSVGQYGLSYLMKRYNRNSYIIFSIGAVVGLSALLMGLQSII 501
            S R G ++H  PF PL  R+D +   L A+GL++AA GGIGGGGILVP+FI+ + F PK+AI LSN TILGG+I N V+N  +RHP  D PL+DWDLIL MEPLTI GA+ GS L+KILP ++L + LV++L +    TLKKG +++++ES+++       + +L       +  +D+ E     S  E    +  +                  K+  L  CF     L + KGGG   SP GVECGS  +W L+     WV+  ++  R  L++ +  K + GY +  G++ W+   TI YP +C  AG  AG+FGVGGGIVKGPLMLEMG+ P VA+AS+A MIL+TS  A+TSF  F LL   Y +  F++G   T++GQY +   + ++NR S I+ SIG V+ LSA  + + + +
Sbjct:   67 SSRDGFEYHKEPF-PLDWRHDGLTAILAALGLIVAASGGIGGGGILVPLFIVALDFKPKHAIALSNFTILGGAIANTVVNSRRRHPHRDGPLIDWDLILAMEPLTIFGAVFGSLLSKILPNFVLTVSLVVILAFIGHRTLKKGFKMFREESRSLQLDPAGTAVELSHRGV--QPLDDNSEYVAFQSDSECGKGRSRLC----------------YKIAALTVCFAGTCALTLLKGGGHLKSPFGVECGSAGYWILSFGAAPWVLIFAVAFRILLVREFEAKLQHGYAFGPGEVRWDSKNTITYPLLCAVAGLLAGLFGVGGGIVKGPLMLEMGILPSVASASAAAMILYTSAAASTSFIAFGLLHPIYGMLFFLLGLACTALGQYVVGQWVHKHNRQSPIVLSIGLVILLSAAFVAVDTTV 468          
BLAST of EWM28681.1 vs. NCBI_GenBank
Match: gi|219112005|ref|XP_002177754.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410639|gb|EEC50568.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 287.345 bits (734), Expect = 5.174e-86
Identity = 175/451 (38.80%), Postives = 273/451 (60.53%), Query Frame = 0
Query:   96 PLQRNDVIGLFLTAVGLMIAAGGGIGGGGILVPIFILVMGFSPKYAIPLSNVTILGGSIMNMVMNVPKRHPSADRPLVDWDLILIMEPLTIGGALAGSFLNKILPEWLLVICLVILLTYTAQSTLKKGLRVYQKESQAM-----AQASRP---------------QSKQLKDLAAAEKNYEDDEEKTLLLSPDEYENPQDNIAKADLQAILDEERGTPWVKVRLLIFCFLVVLVLNIFKGGGSFSSPLGVECGSFAFWFLTSMVFAWVVCISLYVRADLIKMYYLKAKIGYKYAKGDIEWNEWATIKYPCVCFFAGFFAGMFGVGGGIVKGPLMLEMGVDPQVAAASSACMILFTSFTATTSFYIFDLLIYDYAVWLFIIGFLFTSVGQYGLSYLM-------KRYNRNSYIIFSIGAVVGLSALLMGLQSIISLFSGPGSGGKAGGAICD 519
            PL   +VIG  + A+ L + A GGIGGGG++VP+++LVMG  P YAIP+++VT+ GG++ + ++N+ +RHP ADRP++DWDL+L+MEPLT+ G L G+  ++IL E +L++ LV+LL+ TA STL K +R+Y+ E + +     AQA  P               +     D    E+     EE+  +L      NP     K DL   L++E+ TP  K+  L   F V++ LN+  GGGSF SP  ++CGS AFW +  ++ A+++  +   +  LI  + +K  + + Y  GDI+W+   +I YP V   AG FAGMFG+GGG+V  PL+L  GV P VA+A+S+ MILFTS  + +++++F L++ D+A+  F+IGF+ +++GQ  +  +        +++ RNSY+ F IG VV +SALLM +Q +  +   P       G +CD
Sbjct:  184 PLSSREVIGYSVVAMALTLGASGGIGGGGVVVPVYLLVMGLHPHYAIPIASVTVFGGALASTIVNMQRRHPLADRPIIDWDLVLMMEPLTLIGTLLGTLFHRILSEKILIVLLVLLLSITAHSTLSKAMRMYEAEKRYIRHLIAAQADSPRGNPSLGGYVLPFGDEDDSRADTGCKEEARMAAEERQRIL----ILNPDFRTMKTDL---LEQEKVTPRSKIIALCCMFSVLIFLNLMVGGGSFDSPWDIKCGSTAFWVVHVVMIAFLMSSAWMAQTYLIARHEIKDMVRFDYVHGDIKWDTRTSIIYPAVFTIAGVFAGMFGIGGGVVIVPLLLHSGVHPGVASATSSAMILFTSLASVSTYFVFGLIVADFAMAGFVIGFISSTLGQILMRRVRQAKSASGRKFERNSYLAFVIGGVVLVSALLMTIQYVFMIVDQPDE--DTFGGLCD 625          
The following BLAST results are available for this feature:
BLAST of EWM28681.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585111104|gb|EWM28681.1|0.000e+0100.00Protein of unknown function DUF81 [Nannochloropsis... [more]
gi|1072224682|gb|OEU09431.1|1.894e-14354.55hypothetical protein FRACYDRAFT_248281 [Fragilario... [more]
gi|219112381|ref|XP_002177942.1|1.159e-13853.35predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|223992571|ref|XP_002285969.1|3.047e-13649.48predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1210517804|dbj|GAX23205.1|3.083e-13152.37hypothetical protein FisN_21Hh114 [Fistulifera sol... [more]
gi|1210530877|dbj|GAX10417.1|1.383e-12853.20hypothetical protein FisN_21Lh114 [Fistulifera sol... [more]
gi|223998204|ref|XP_002288775.1|3.494e-11051.39predicted protein, partial [Thalassiosira pseudona... [more]
gi|397643932|gb|EJK76166.1|7.142e-9944.58hypothetical protein THAOC_02088 [Thalassiosira oc... [more]
gi|1129164611|gb|OLP76855.1|1.980e-9142.52E3 ubiquitin-protein ligase Nedd-4, partial [Symbi... [more]
gi|219112005|ref|XP_002177754.1|5.174e-8638.80predicted protein [Phaeodactylum tricornutum CCAP ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna1978rna1978Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications